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27 protocols using olig2

1

Immunofluorescence Staining of Cell Cultures

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Cells were seed on glass bottom dishes (SORFA Life Science, Beijing, China) and fixed with 4% paraformaldehyde (w/v) after treatment at room temperature for 30 min. Then the cells were permeabilized with 0.1% Triton X-100 for 10 min after washing with PBS for three times. The samples were blocked with 5 % BSA at room temperature for 30 min and incubated with primary antibodies at 4 °C overnight: Olig2 (Abcam, Cat# ab109186), Iba1(Abcam, Cat# ab178846), GFAP (Abcam, Cat# ab68428), NeuN (Abcam, Cat# ab177487), LAMP2 (Proteintech, Cat# 66301-1-Ig), TFEB (Proteintech, Cat# 13372-1-AP), Annexin A7 (Proteintech, Cat# 10154-2-AP), LAMP5 (Santa Cruz, Cat# sc-398190), LC3B (Abcam, Cat# ab192890), Cleaved-caspase3 (CST, Cat# 9661 S). Samples were incubated with secondary antibodies at 37 °C for 1 h after washing with TBST for three times. Finally, samples were stained with DAPI for 10 min to show nucleus, and fluorescence signals were detected by laser scanning confocal microscopy (Zeiss LSM900, Germany).
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2

Immunostaining of Brain Tissue Sections

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Immunostaining was performed as previously described14 (link). Sections were fixed with 4% paraformaldehyde in 20 mM Tris-HCl (pH 7.4) containing 150 mM NaCl, 3 mM KCl, and 0.1% Tween 20 (TBS-T) for 20 min, washed with TBS-T, and then incubated with 0.25% Triton X-100 in TBS-T for 15 min. The sections were treated with 10 mM citrate solution (pH 6.0) for antigen retrieval at 95 °C for 15 min, washed with TBS-T, and then blocked in 10% goat serum (Sigma-Aldrich, St. Louis, MO) in TBS-T for 1 h. Sections were incubated with primary antibody (MBP, 1:500 BioLegend, San Diego, CA; Olig2, 1:500 Abcam, cambridge UK; NeuN, 1:500 MBL, Nagoya, JAPAN; GFAP, 1:500 Cell Signaling Technology, Beverly MA; Iba1, 1:500 Wako, Japan) with 10% goat serum in TBS-T at 4 °C overnight, washed with TBS-T, and then incubated with CFTM 594 goat anti-rabbit IgG(H + L) (1:1000 Biotium, Hayward, CA) and CFTM 488 goat anti-mouse IgG (H + L) (1:1000 Biotium) at room temperature for 2 h. After being washed, the sections were mounted using Fluoromount (Diagnostic BioSystems, Pleasanton, CA).
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3

Immunohistochemistry of FFPE Tissue Samples

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For cases with sufficient material (n = 11), immunohistochemistry was conducted on 3 µm thick FFPE tissue sections mounted on StarFrost Advanced Adhesive slides (Engelbrecht, Kassel, Germany) followed by drying at 80 °C for 15 min. Immunohistochemistry was performed on a BenchMark Ultra immunostainer (Ventana Medical Systems, Tucson, USA). Slides were pretreated with Cell Conditioning Solution CC1 (Ventana Medical Systems) for 32 min at room temperature. Primary antibodies were incubated at 37 °C for 32 min, followed by Ventana standard signal amplification, UltraWash, counter-staining with one drop of hematoxylin for 4 min, and one drop of bluing reagent for 4 min. UltraView Universal DAB Detection Kit (Ventana Medical Systems) was used for visualization. Primary antibodies were diluted as followed: MutL1 (MLH1, 1:100, DAKO (Agilent), Santa Clara, USA), MutS2 (MSH2, 1:50, DAKO), MutS6 (MSH6, 1:500, DAKO), PMS2 (1:400, DAKO), ATRX (1:2000, BSB3296, BioSB, Santa Barbara, USA), IDH1 R132H (1:2, clone 1 [15 (link)]), Olig2 (1:100, Abcam, Cambridge, UK), GFAP (1:2000, Cell signalling, Promega). Stained slides were scanned on the Aperio AT2 Scanner (Aperio Technologies, Vista, USA) and digitalized using Aperio ImageScope software v12.3.2.8013.
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4

Oligodendrocyte Progenitor Cell Proliferation

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OPCs were plated on 8‐well Permanox chamber‐slides (Nunc, Naperville, IL), precoated with 5 µg/mL PLL followed by appropriate aFn or pFn coatings (described above), at a density of 30,000 cells per well. OPCs were allowed to incorporate 5‐bromo‐2‐deoxyuridine (BrdU; 10 µM; Roche) for 24 h in the presence of 10 ng/mL PDGF‐AA and 10 ng/mL FGF‐2. Then, cells were fixed in 4% PFA for 20 min, and additionally fixed in 5% acetic acid in ethanol for 20 min. BrdU was detected using reagents from the BrdU labeling and Detection Kit I (Roche) according to the manufacturer's instructions with the addition of the oligodendrocyte lineage marker Olig2 (Abcam) and Alexa Fluor© 546‐conjugated anti‐rabbit antibody, and visualization of nuclei with DAPI (1 µg/mL). To compare the percentages of BrdU‐incorporating cells between the conditions, the numbers of double BrdU‐ and Olig2‐positive cells were counted relative to the Olig2‐positive cells (at least 150 cells per condition) from images captured with a Leica TCS SP8 Confocal Laser Scanning Microscope.
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5

Protein Extraction and Western Blot Analysis

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The protein was extracted by RIPA cell lysate (containing PMSF) as previously described [20 (link)]. Protein samples were heated at 100°C for 10 minutes, and the protein concentration was quantified using BCA protein assay kit (Beyotime Institute of Biotechnology, Shanghai, China). Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) was processed and proteins were later transferred onto nitrocellulose membrane. The membrane was blocked with 5% nonfat milk in PBST at room temperature for two hours. The primary antibodies (MBP, CNPase, GFAP, and olig2 antibodies, 1: 1,000, Abcam; Actin, 1: 500, Zsbio, Beijing, China) were incubated with the membrane overnight at 4°C. After washing three times (10 minutes each time), the secondary antibody was incubated with the membrane for two hours at room temperature. Chemiluminescent substrate detection reagent was applied to assist with the staining. The target band was analyzed by ImageJ software for grayscale analysis.
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6

Western Blot Analysis of Protein Expression

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After OSM and STAT3 inhibitor treatment, the total proteins were extracted by RIPA buffer (Pierce, Rockford, IL) on ice. Equal quantities of protein samples were separated by electrophoresis on 12% SDS-PAGE polyacrylamide gels. Then, the samples were electro-transferred to PVDF membranes (0.22 μm, Millipore) using a wet transfer apparatus (Bio‐Rad) and blocked with 5% BSA in PBS for 1 h at room temperature. The membranes were incubated overnight at 4 °C with primary antibodies of CD44, FN1, CHI3L1, CD24, DLL3, OLIG2 and β-ACTIN (Abcam), respectively. After that, the blots were incubated with horseradish peroxidase (HRP)-conjugated secondary antibodies (#HA1001, huabio, 1:5000) at room temperature for 1 h [30 (link)]. The immobilon reagents (Millipore) was used for the visualization and detection of antibody-antigen complexes. The band intensity was measured by ImageJ software.
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7

OPC Differentiation Quantification Protocol

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Following treatment, coverslips were gently washed with PBS before fixation with 4% PFA. Following fixation, cells were permeabilized using 5% goat serum (Thermo Fisher Scientific, MA, USA) and 0.01% Tween20 (Sigma-Aldrich, MA, USA). Cells were stained using 4’6-diamidino-2-phenylindole (DAPI) to identify nuclei, as well as the indicated primary antibodies, including MBP (1:500; Abcam, Cambridge, UK), Olig2 (1:500; Abcam, Cambridge, UK), and NFκB (1:200; Thermo Fisher Scientific, MA, USA). Conjugated secondary antisera directed against the species of the primary were used according to manufacturer instructions (1:1,000, Abcam, Cambridge, UK). Coverslips were then affixed to slides (Denville Ultraclear, MA, USA) with fluromount-G (Invitrogen, MA, USA) and imaged (Olympus 1X71, CellSens Software; Olympus, MA, USA). Five fields of view at 20× magnification using identical image capture settings were assessed by an experimenter blinded to treatments. To analyze the amount of OPC differentiation, Olig2+ cells and MBP+ cells were counted and the percent MBP+ cells was calculated. Olig2+ was also used to distinguish astrocytes in the cultures to refine the cell counts to only MBP+/Olig2+ OL-lineage cells. Data are presented as the percentage of MBP+/Olig2+ cells relative to the control, differentiation media only, condition set as 100%.
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8

Olig2 Expression in Glial Tumors

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The Olig2 protein is transcription factor known to be required for proliferation of glial tumors and regulated by several sialoglycan expression [27 (link), 28 (link)]. Naïve and Dex-treated cells were scraped, diluted to 105 per sample and incubated with Olig2 (Abcam, 2,5 µg/ml) antibody for 30 min at 4 °C. To facilitate intracellular staining, 0.01% Triton was used. Cells were washed with phosphate buffered saline, stained with appropriate secondary fluorescent antibody and analysed on Becton Dickinson flow cytometry system. In each analysis, corresponding isotype control antibody was used as a negative control.
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9

Brainstem Immunohistochemistry Protocol

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Brainstem slices (100 μm thick) were cut and subsequently fixed with 4% (wt/vol) paraformaldehyde in phosphate buffer solution (PBS) for 20 min. Free‐floating sections were blocked in 4% goat serum and 0.3% Triton X‐100 in PBS for 1 hr. Slices were incubated with antibodies for chicken anti‐green fluorescent protein (GFP; 1:300; Abcam, Cambridge, UK, Cat# ab13970, RRID:AB_300798), rabbit anti‐oligodendrocyte transcription factor 2 (Olig2; 1:200; Abcam, Cambridge, UK, Cat# ab109186, RRID:AB_10861310), mouse anti‐neuronal nuclei (NeuN; 1:600; Millipore, Burlington, MA, USA, Cat# MAB377, RRID:AB_2298772) overnight at 4°C and subsequently incubated with different Alexa dye–conjugated secondary antibodies (1:500, Invitrogen, Carlsbad, CA, USA) for 2 hr at room temperature. Slices were mounted onto Superfrost slides in photobleaching‐protective medium (Fluoroshield; Sigma‐Aldrich, St. Louis, MO, USA). Stained slices were viewed with laser lines at 488, 555, and 633 nm using a 40× oil‐immersion objective on a confocal laser‐scanning microscope (LSM‐510, Zeiss, Oberkochen, Germany). Stack images were acquired at a digital size of 1,024 × 1,024 pixels with optical section separation (z interval) of 0.5 μm and were later cropped to the relevant part of the field without changing the resolution.
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10

Immunohistochemical Profiling of Prefrontal Cortex

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Prefrontal tissue sections from a naive adult rhesus monkey were processed for immunohistochemistry with NeuN (Millipore, 1:1,000) and Olig2 (Abcam, 1:2,000) antibodies, in conjunction with Alexa Fluor 488 goat anti-rabbit and Alexa Fluor 594 goat anti-mouse IgGs (Invitrogen), using standard procedures. In a second, independent set of immunohistochemistry experiments, small tissue blocks (surface area <0.25 cm2) were dissected from the dorsolateral prefrontal cortex (Area9/46), immersion-fixed in 4 % paraformaldehyde solution for 15–18 hours, dehydrated in 70 %, 90 % and 100 % ethanol (3 × 30 min each) followed by xylene immersion (3 × 20 min) and paraffin-embedded using a Tissue TEK embedding center. Paraffin embedded tissue blocks were cut in 8 µm thick sections and mounted on slides for immunohistochemistry. Sections of three clozapine-exposed animals with elevated proportions of NeuN+ nuclei in white matter were de-paraffinized using xylazine and ethanol. The sections were rehydrated with water, permeabilized with 0.1 % Triton X-100, followed by NeuN staining (1:100, ABN78A4, EMD Millipore). After mounting the tissue with DAPI Fluoromount-G (0100-200, SouthernBiotech), images of NeuN+ subcortical white matter neurons were taken using a Carl Zeiss CLSM780 microscope. Image processing was done with ImageJ (NIH).
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