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4 protocols using retinoic acid r2625

1

Retinoic Acid-Induced SH-SY5Y Differentiation

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Retinoic acid (R2625; Sigma) powder was dissolved in DMSO at 3 mg/mL (0.01 M) as stock solution and stored at −80°C with light-protected vials. To induce differentiation of SH-SY5Y cells, we diluted the stock solution with a tissue culture medium at a final concentration of 10 µM.
For the construction of damage models in cellular experiments, we treated SH-SY5Y cells with H2O2 (50 µM). Cells were harvested and followed by subsequent experiments after being treated with H2O2 for 8 hours.
For cells, Amlexanox and Degrasyn were diluted in DMSO according to the manufacturer's instructions and then further diluted in complete cell culture media at a final concentration of 100 µM (Amlexanox) or 5 µM (Degrasyn). For animals, mice are randomly assigned to 2 groups: one group received Degrasyn (40 mg/kg, intraperitoneally) in 100 µL DMSO every 2 days (7 injections); and the other received DMSO (vehicle) every other day (7 injections). CHX (100 µg/mL) was used for protein stability assay and cells were harvested at different time points for the preparation of WCL and subsequent Western blot analysis.
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2

Culturing and Characterizing hHF-MSC and Par-C10 Cells

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The hHF-MSC were obtained and cultured under conditions previously described [30 (link),31 (link)], passages 6–12 wild type and 9–11 FGF-7 knockout cells were used in the experiments. The Par-C10 cells [12 (link)] were cultured in DMEM/Ham’s F12 (1:1) (12,500,096, ThermoFisher Scientific, Grand Island, NY) containing 2.5% (v/v) fetal bovine serum (Atlanta Biologicals, Flowery Branch, GA) and the following supplements: 0.1 μM retinoic acid (R2625, Sigma-Aldrich, St. Louis, MO), 80 ng/mL epidermal growth factor (E4127, Sigma-Aldrich, St. Louis, MO), 2 nM triiodothyronine (T6397, Sigma-Aldrich, St. Louis, MO), 5 mM glutamine (included in the DMEM/F12 powder), 0.4 μg/mL hydrocortisone (H0888, Sigma-Aldrich, St. Louis, MO), 5 μg/mL insulin, 5 μg/mL transferrin, 5 ng/mL sodium selenite (ITS, I1884, Sigma-Aldrich, St. Louis, MO), and freshly added 100 μg/mL Gentamicin™ (15,750,060, ThermoFisher Scientific, Grand Island, NY), passages 40–60 were used in the experiments [13 (link)]. Cells were then filtered through a 0.4-μm nylon mesh, and approximately 2000 cells/well were plated on top of the indicated extracellular matrix.
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3

Comprehensive Pluripotency Marker Analysis

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Commercially available antibodies were used: anti-DDX4/Cvh (ab13840, Abcam, Cambridge, UK); Goat Anti-Mouse IgG (Cy3 labeled, Bio-Synthesis, Inc., Louisville, KY, USA; dilution ratio:1:100); anti-NANOG and anti-OCT4 (Abcam, dilution ratio 1:100); anti-SSEA (BioLegend, San Diego, CA, USA, dilution ratio 1:100); anti-integrin α6 and anti-integrin β1 (BioLegend, dilution ratio 1:100).
Dulbecco’s modified Eagle medium (DMEM, 41965062) and fetal bovine serum (FBS, 10100-147) from Gibco (Grand Island, NY, USA); FuGENE® HD (E2311) and Dual-Luciferase® Reporter Assay System from Promega (Madison, WI, USA); Leukemia Inhibit Factor from mouse (mLIF, L5158), Fibroblast Growth Factor-Basic human (bFGF, F0291), Stem Cell Human (SCF, S7901); TSA from Sigma (St. Louis, MO, USA); PARIS™ from Ambion (Austin, TX, USA); retinoic acid (R2625) from Sigma.
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4

Retinoic Acid and Rapamycin Treatments

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Retinoic acid (R2625, Sigma) powder was prepared in DMSO at 3 mg/ml (0.01 M) as stock solution and stored in light-protected vials at −80 °C. Tissue culture medium was used to dilute the stock solution at a final concentration of 10 µM to induce differentiation of SH-SY5Y cells.
For animal experiments, rapamycin (HY-10219, MedChemExpress) was dissolved in DMSO at 20 mg/ml for temporary storage in −20 °C. Before each administration, rapamycin stock solution was diluted in sterile saline solution and given intraperitoneally at 6 mg/kg every two days. For cell experiments, rapamycin was dissolved in DMSO at 20 mM. Subsequent dilutions were made in growth medium with a final concentration of 100 nM and maintained for 2 h before cells were harvested.
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