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Rabbit anti bdnf

Manufactured by Santa Cruz Biotechnology
Sourced in United States

Rabbit anti-BDNF is a primary antibody that specifically binds to and detects brain-derived neurotrophic factor (BDNF), a protein involved in the growth, development, and survival of neurons. This antibody can be used for various research applications, including immunohistochemistry, Western blotting, and ELISA.

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27 protocols using rabbit anti bdnf

1

Antibody Characterization for Neuroscience

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Anti-rabbit ZnT3 antibody was a kind gift from Professor Richard D. Palmiter (University of Washington, USA). Minocycline hydrochloride, Propidium Iodide (PI), and the anti-rabbit MAP2 were purchased from Sigma-Aldrich (USA). Anti-rabbit BDNF and anti-rabbit TrkB antibodies were obtained from Santa-Cruz Biotech. Inc. (USA). The anti-mouse NeuN antibody was obtained from Merck Millipore (USA). The anti-mouse SMI32 (Anti-Neurofilament H) antibody was obtained from Covance (Sternberger Monoclonal Inc., USA). All MMP zymogram materials were purchased from Thermo Fisher Scientific Inc. (USA).
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2

Western Blot Analysis of BDNF Signaling

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Anti-rabbit BDNF (1:1,000; Santa Cruz, Inc., CA, USA), TrkB (1:1,000; Santa Cruz, Inc., CA, USA), p-AKT (1:1,000; Santa Cruz, Inc., CA, USA), Bcl-2 (1:1,000, Cell Signaling Technology, Inc., MA, USA), and Bax (1:1,000, Cell Signaling Technology, Inc., MA, USA) antibodies were used. Images were acquired using an X-ray film processor. Normalization was performed using mouse monoclonal GAPDH antibodies (1:500; Santa Cruz, Inc., CA, USA). The bands were quantitated using Gel-Pro Analyzer 4.0 software (Media Cybernetics, USA).
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3

Western Blot Analysis of BDNF and TrkB

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Expression of BDNF and TrkB was determined by western blot analysis, as described previously [6 (link),20 (link)]. Hippocampal tissues were homogenized in lysis buffer. Protein (30 μg) was separated on sodium dodecyl sulfate-polyacrylamide gels, and then transferred onto a nitrocellulose membrane. Rabbit anti-BDNF (1:1,000; Santa Cruz Biotechnology), rabbit anti-TrkB (1:1,000; Santa Cruz Biotechnology), and mouse anti-β-actin (1:1,000; Santa Cruz Biotechnology) antibodies were used as primary antibodies. Horseradish peroxidase-conjugated antimouse antibody for β-actin and antirabbit antibody for BDNF and TrkB were used as secondary antibodies.
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4

Neurotrophin Signaling Pathway Analysis

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Western blotting was performed as described previously (Bellanger et al, 2011 (link)). Rabbit anti-BDNF, anti-NGF, anti-NT3, anti-p75NTR, goat anti-sortilin, and mouse anti-PARP-1 antibodies were purchased from Santa Cruz Biotechnology. Mouse anti-TrkB, anti-TrkA, and anti-TrkC antibodies were purchased from R&D Systems. Anti-phospho TrkB (pY817) and anti-phospho-TrkC (Y820) were purchased from Abcam (Epitomics, Burlingame, CA, USA) and anti-phospho-TrkA (Y490) from Cell Signalling. Protein-loading control was performed with anti-βactin Ab (Sigma). Visualisation of immunocomplexes was accomplished using the Immobilon Western Chemiluminescent HRP Substrate (Millipore, Darmstadt, Germany). Western blots were scanned using a bioimaging system (Genesnap; Syngene Europe, Cambridge, UK).
Co-immunoprecipitations were performed in accordance with the manufacturer's instructions (Catch and Release kit, Millipore) with 500 μg of proteins and anti-p75NTR for 1 h at room temperature. Finally immunoprecipitates were subjected to SDS–polyacrylamide gel electrophoresis, before analysis by western blotting (with anti-Trk, anti-sortilin and anti-p75NTR).
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5

Protein Expression Analysis in Aging Mouse Brains

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2-, 4- and 6-month EFAD mice were anesthetized with sodium pentobarbital (50 mg/kg), transcardially perfused with ice-cold PBS, brains removed and dissected into cortex and hippocampus, snap-frozen in liquid nitrogen and stored at -80°C, as previous described [133 (link)]. Dissected brains were homogenized in lysis buffer [90 (link),132 (link)] (50 mM Tris-HCl, 150 mM NaCl, pH7.4, 1% Triton X-100, 1x protease inhibitor cocktail) and 40 μg of total protein (BCA protein assay kit; Pierce, Rockford, IL) was separated on 4–12% gradient Bis-Tris gels (Invitrogen) under reducing conditions, and transferred to PVDF membranes [47 (link)]. The following primary antibodies were used: rabbit anti-PSD95 (1:3000, Abcam), mouse anti-synaptophysin (1:2000, Abcam), mouse/rabbit anti-β-actin (1:2000; Abcam), rabbit anti-drebrin antibody (1:1000; Abcam), rabbit anti-NMDAR1/anti-NMDAR2B (1:1000; Millipore), anti-NMDAR2A (1:500; Millipore), mouse anti-apoE (1:600; Santa Cruz), rabbit anti-BDNF (1:200; Santa Cruz), rabbit anti-p-CaMK-II (1:1000; Santa Cruz) and rabbit anti-p-CREB (1:1000; Cell Signaling) [90 (link),132 (link)]. HRP-conjugated secondary antibodies, enhanced chemiluminescence (Amersham, Piscataway, NJ) and Image J software were used to quantify densities of the immunoreactive bands relative to β-actin.
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6

Dental Pulp Stem Cell Characterization

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Human dental pulp stem cells (DPSCs) were purchased from Lonza, Pharma, and Biotech (Cat. # PT-5025). The TrkB agonist (LM22A-4) was purchased from R&D System, the TrkB antagonist (Cyclotraxin-B, CTX-B) was purchased from Tocris Bioscience, and the recombinant human BDNF protein was purchased from Invitrogen. The MEMα, PBS, FBS, L-glutamine, and antibiotic–antimycotic were procured from Gibco™ Fisher Scientific (Waltham, MA, USA). Round, Poly-D-Lysine-coated (BioCoat™, 12 mm) German glass coverslips were purchased from Corning™ Fisher Scientific (Waltham, MA, USA). Various antibodies were procured: rabbit anti-BDNF (Santa Cruz, Dallas, TX, USA), rabbit anti-TrkB receptor (Proteintech, St. Louis, MO, USA), mouse anti-DMP-1 (R&D System/Sigma, St. Louis, MO, USA), and rabbit anti-DSPP (Santa Cruz, Dallas, TX, USA). Fluorescent secondary antibodies were obtained from Life Technologies (Grand Island, NY, USA). Lipoteichoic acid (LTA) from Staphylococcus aureus (Cat. # L2515) was purchased from Sigma-Aldrich (St. Louis, MO, USA).
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7

Western Blot Immunodetection of Molecular Chaperones

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Western blots were performed as previously described16 (link). Antibodies (Abs) were used as follows: rabbit anti-HSP90, cHSP70, HSP40, HSP27, HSF1, PSD95, Synapsin I (1:1000; Cell Signaling); mouse anti-iHSP70 (1:1000; Enzo Life Sciences), rabbit anti-BDNF (1:500; Santa Cruz Biotechnology); mouse anti-β-actin (1:10000; Sigma-Aldrich), rabbit anti-Synaptophysin (1:2000; Chemicon/Millipore), and anti-mouse IgG and anti-rabbit IgG horseradish peroxidase-conjugated Abs (1:5000; Sigma-Aldrich).
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8

Quantifying Hippocampal Protein Levels

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Western blot analysis for BDNF, TrkB, and AMPK was done as previously explained method [14 ,22 (link)]. Lysis buffer was applied to lyse hippocampal tissues, and protein content was detected by a colorimetric protein assay kit (Bio-Rad, Hercules, CA, USA). Sodium dodecyl sulfate-polyacrylamide gel was used to separated 30-μg protein, then reaction mixture was transferred to a nitrocellulose membrane, stopped reaction by applying dehydrated milk, and then incubated by primary antibodies. Mouse anti-β actin (1:3,000; Santa Cruz Biotechnology, Santa Cruz, CA, USA), rabbit anti-BDNF (1:1,000; Santa Cruz Biotechnology), rabbit anti-TrkB (1:1,000; Santa Cruz Biotechnology), and rabbit anti-AMPK (1:1,000; Santa Cruz Biotechnology) were selected as the primary antibodies. Horseradish peroxidaseconjugated secondary antibodies were used, and enhanced chemiluminescence detection system (Santa Cruz Biotechnology) measured the expression of bands.
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9

Immunostaining of Neuroblasts, proBDNF, and BDNF

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To examine the effect of tPA on neuroblasts, proBDNF and BDNF, immunostaining was performed in five brain coronal sections and cervical spinal cord transverse sections. Briefly, 6-µm paraffin-embedded sections were deparaffinized and rehydrated. Antigen retrieval was performed by boiling sections in 10-mM citrate buffer (pH 6.0) for 10 min. After washing with PBS, sections were incubated with 0.3% H2O2 in PBS for 10 min, blocked with 1% BSA containing 0.3% Triton-X 100 for 1 h at room temperature, and incubated with mouse anti-DCX (1∶200; Santa Cruz Biotechnology, Santa Cruz, CA) or rabbit anti-proBDNF (1∶200; AbCam, Cambridge, MA) or rabbit anti-BDNF (1∶200; Santa Cruz Biotechnology, CA) at 4°C overnight. For negative controls, primary antibodies were omitted. After washing, sections were incubated with biotinylated anti-mouse or anti-rabbit antibodies (1∶200; Vector Laboratories, Inc., Burlingame, CA) for 30 min at room temperature. After an additional washing, sections were incubated with an avidin-biotin-peroxidase system (ABC kit, Vector Laboratories, Inc.), visualized with diaminobenzidine (Sigma, St. Louis, MO), and counterstained with hematoxylin.
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10

Western Blot Analysis of Rat Hippocampus

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Following decapitation, rat hippocampus was isolated rapidly and stored at −80 °C for Western blotting detection. The tissues were weighed, sonicated in RIPA lysis buffer supplemented with fresh protease and phosphatase inhibitors, and centrifuged at a speed of 12,000 rpm for 25 min. Then the protein concentration was determined by BCA assay. After denaturation and electrophoresis, the proteins were transferred onto a PVDF membrane in wet conditions. Following blocking in Tris-buffered saline Tween-20 solution with 5% (w/v) nonfat milk powder (1 h, RT), the protein membranes were incubated respectively in primary antibody: rabbit anti-BDNF (1:400, Santa Cruz Biotechnology, Inc., CA, USA), cAMP response element binding protein (CREB, 1:1000, Cell Signaling Tech), p-CREB (Ser133, 1:400, Cell Signaling Tech, MA, USA) and β-actin (1:8000, Sigma–Aldrich Inc., MO, USA) at 4 °C overnight. After washing, the membranes were incubated (1 h, RT) with anti-rabbit or anti-mouse IgG labeled with horseradish peroxidase (Jackson ImmunoResearch Inc., PA, USA) and then the membranes were washed and developed with Chemiluminescence reagents (Millipore Corp., MA, USA). The chemiluminescence signal was transformed into a digital image using FUJIFILM imaging system LAS-3000 (Fuji Photo Film Co., Ltd., Tokyo, Japan).
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