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2 protocols using carboxylated polybeads

1

TIRF Microscopy of Actin Dynamics

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Time-lapse TIRF microscopy movies were obtained using a iXon EMCCD camera (Andor Technology, Belfast, UK) fitted to an Olympus IX-71 microscope with through-the-objective TIRF illumination as described (Zimmermann et al., 2016 ). Mg-ATP-actin (10–20% Alexa-488 labeled) was mixed with a polymerization mix (10 mM imidazole [pH 7.0], 50 mM KCl, 1 mM MgCl2, 1 mM EGTA, 50 mM DTT, 0.2 mM ATP, 50 μM CaCl2, 15 mM glucose, 20 μg/ml catalase, 100 μg/ml glucose oxidase, and 0.5% [400 cP] methylcellulose) to induce F-actin assembly (Winkelman et al., 2014 (link)). Where stated, formin or profilin was added to the polymerization mix prior to mixing with actin and initiating F-actin polymerization. The mixture was then added to a flow chamber and imaged at 10-s intervals at room temperature. For bead assays, Wsp1 and formin beads were prepared as previously described (Loisel et al., 1999 ). Carboxylated Polybeads (Polysciences, Warrington, PA) were coated with Wsp1 or unlabeled SNAP-FOR1(3P,FH2) and flowed into the TIRF chamber prior to initiating the reaction.
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2

Fabrication and Characterization of Biotinylated Surfaces

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Tetramethylammonium hydroxide (TMAOH), streptavidin, poly(ethylene glycol)bis(amine) (PEG-diamine, average Mn 3,400), biotin (5-fluorescein) conjugate, and trichlorosilane (from Sigma-Aldrich); Dynabead™ M-280 streptavidin, ethyl-3-(3-(dimethylamino)propyl)carbodiimide (EDC), hydroxysulfosuccinimide (sulfo-NHS), bis(sulfosuccinimidyl) suberate (BS3), SuperBlock T20 blocking buffer, Glutamax, and 1-Step Ultra TMB-ELISA (from Thermo Fisher Scientific); fetal bovine serum (from Atlanta Biologicals); penicillin-streptomycin (from Cellgro); DMEM media (from Mediatech); polydimethylsiloxane (PDMS) (from Dow Corning); 10 μm fluorescent microbeads (from Bangs Laboratory); carboxymethyl (CM) dextran (from PK chemicals A/S); 3 μm carboxylated polybeads (from Polyscience); Biotinylated anti-mouse IgG antibody (from Jackson ImmunoResearch); HRP anti-mouse-IgG, Alexa Fluor 488 streptavidin, anti-mouse CD45 antibody, Rat IgG2b (from BioLegend); MACS column (from Miltenyi Biotec); Amicon Ultra centrifugal filters (from Merck Millipore) were used as received. All chemicals were of analytical grade and used without purification.
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