The largest database of trusted experimental protocols

3 protocols using pab7154

1

Comprehensive Immunolabeling Protocol for RNA Splicing

Check if the same lab product or an alternative is used in the 5 most similar protocols
We used the following primary antibodies: rabbit polyclonal antibodies against SANS (RpAb) (29 (link),37 (link)), anti-SANS (mouse, monoclonal antibody; MmAb) (sc-514418, Santa Cruz), anti-FLAG (F1804, Sigma Aldrich), anti-PRPF6 (sc-48786, Santa Cruz), anti-HA (Roche), anti-GFP (ab6556, Abcam), anti-PRPF31 (PAB7154, Abnova), anti-hSNU114 (38 (link)), anti-Coilin (sc-55594, Santa Cruz), anti-SC35 (sc-53518, Santa Cruz), anti-SON (ATLAS, HPA023535), anti-SF3B1 (MmAb) (sc-514655, Santa Cruz), anti-SF3B1 (RmAb) (Will et al. 2001), anti-U5 52K (39 (link)), anti-SART1 (PA556663, Thermo Fisher) and anti-PRPF38 (40 (link)). Secondary antibodies were conjugated to the following fluorophores: Alexa488 (donkey-anti-rabbit, A21206, Molecular Probes,), CF 488 (donkey-anti-guinea pig, 20169-1, Biotrend,), Alexa488 (donkey-anti-mouse, A21202, Molecular Probes), Alexa 555 (donkey-anti-mouse, A31570, Molecular Probes), Alexa 568 (donkey-anti-rabbit, A10043, Invitrogen,) CF640 (donkey-anti-goat, 20179-1, Biotrend), Alexa 680 (donkey-anti-goat, A21084, Molecular Probes), Alexa 680 (goat-anti-rat, A21096, Molecular Probes) Alexa 680 (donkey-anti-rabbit, A10043), IRDye 800 (donkey-anti-mouse, 610–732-124, Rockland), Abberior STAR Orange (goat-anti-mouse, Abberior,), and Abberior STAR Red (goat-anti-Rabbit). Nuclear DNA was stained with DAPI (4’,6-diamidino-2-phenylindole) (1 mg/ml) (Sigma-Aldrich).
+ Open protocol
+ Expand
2

Immunofluorescence analysis of iPSC-derived retinal organoids

Check if the same lab product or an alternative is used in the 5 most similar protocols
iPSC-derived retinal organoids were fixed in 4% paraformaldehyde at room temperature for 20 min. Post-fixation retinal organoids were incubated overnight with 30% sucrose in PBS, and then frozen and cryosectioned. The frozen sections were stained for a panel of retinal-specific antibodies. Antibodies against the following proteins were used at the indicated dilutions: RECOVERIN (Merck Millipore, AB5585, 1:800), NRL (Santa Cruz, sc-374277, 1:800), CRALBP (Abcam, ab15051, 1:500), HuC/D (ThermoFisher, A21271, 1:500), PKCα (BD Biosciences, 610107, 1:500), ARL13B (Proteintech, 17711-1-AP, 1:500), PRPF31 (Abnova, PAB7154, 1:500), SNRPB monoclonal antibody (Y12) (ThermoFisher, MA5-13449, 1:500). The following secondary antibodies were used: anti-mouse-IgG-FITC (Jackson Immuno Research, 715-095-151, 1:500), anti-mouse-IgG-Cy3 (Jackson Immuno Research/115-165-003, 1:500), anti-rabbit-IgG-Cy3 (Jackson Immuno Research/111-165-003, 1:500), anti-goat-IgG-FITC (Jackson Immuno Research/705-096-147, 1:500). Nuclei were labelled with blue-DAPI (ThermoFisher, 62248). All antibody details are shown in Supplementary Data 6.
+ Open protocol
+ Expand
3

Immunofluorescence Staining of Cellular Organelles

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were fixed in 4% formaldehyde (Sigma, 47608) for 15 min at room temperature and permeabilised with 0.25% Triton X-100 (Sigma, T8787) for 15 min, followed by treatment with blocking solution (3% BSA in PBS, Sigma, A3311) for 30 min at room temperature. Cells were treated with primary antibodies anti-bestrophin (Abcam, ab2182, 1:300), anti-sodium potassium ATPase (Alexa Fluor® 488 conjugate) (Abcam, ab197713, 1:50), pericentrin (Abcam, ab28144, 1:500), MERTK (Bethyl, A300-222A, 1:200), ARL13B (Proteintech, 17711-1-AP, 1:500), collagen IV (Abcam, ab6586, 1:200), PRPF31 (Abnova, PAB7154, 1:500) and SNRPB monoclonal antibody (Y12) (ThermoFisher, MA5-13449, 1:500), overnight at 4 °C, and with secondary antibodies anti-rabbit FITC (Sigma, T9887, 1:500) or anti-mouse FITC (Jackson Immuno Research, 715-095-151, 1:500) and anti-mouse Cy3 (Jackson Immuno Research, 115-165-003, 1:500) or anti-rabbit Cy3 (Jackson Immuno Research, 111-165-003, 1:500) diluted in PBS for 1 h at room temperature. Washes with PBS were carried out between and after treatments. Finally, cells were treated with the nuclear stain-DAPI (Partec, 05-5005), and imaged using a Nikon A1R confocal microscope in combination with the associated NIS Elements software. All antibody details are shown in Supplementary Data 6.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!