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10 protocols using sk br 3

1

Culturing Breast Cancer Cell Lines

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The following breast cancer cell lines were used in this study: SK-BR-3, MDA-MB-453, MDA-MB-231 and T-47-D (American Type Culture Collection, Manassas, VA, USA). The MDA-MB-453, MDA-MB-231 and T-47-D cells were cultured in Dulbecco's Modified Eagle Medium, DMEM (Sigma-Aldrich, Saint Louis, MO, USA), and the SK-BR-3 in the McCoy’s 5A medium (Lonza, Basel, Switzerland). All media contained 2 mM l-glutamine and were supplemented with 10% FBS (Thermo Fisher Scientific, Waltham, MA, USA) and 1 x penicillin-streptomycin solution (Biowest, Nuaillé, France). The cells were cultured at 37 °C in 5% CO2 and humidified atmosphere. Upon reaching 90% confluence, the cells were passaged using Trypsin-EDTA solution (Thermo Fisher Scientific, Waltham, MA, USA)
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Culturing Human Breast Cancer Cell Lines

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Human breast cell lines MCF‐7, T‐47D, MDA‐MB‐361, MDA‐MB‐231, MDA‐MB‐468, BT‐549, HCC1954, and SK‐BR‐3 were obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA). MCF‐7, MDA‐MB‐361, MDA‐MB‐231, and SK‐BR‐3 cells were cultured in Dulbecco's modified Eagle's medium (DMEM, Lonza, Walkersville, MD, USA). T‐47D, HCC1954, MDA‐MB‐468, and BT‐549 cells were cultured in RPMI 1640 medium (Lonza), supplemented with 10% (v/v) heat‐inactivated fetal bovine serum (SAFC Biosciences, Lenexa, KS, USA), 100 units/mL penicillin, and 100 μg/mL streptomycin. All cells were maintained in a humidified incubator at a constant temperature of 37°C and 5% CO2.
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Characterization of HER2+ Breast Cancer Cell Lines

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HER2+ breast cancer cell lines BT474 (HTB-20) representing Luminal B (ER+; PR+, HER2+; ductal carcinoma) subtype and SKBR3 (HTB-30) representing HER2+ subtype (ER-; PR-; HER2+; adenocarcinoma) of breast cancer were purchased from the American Type Culture Collection (ATCC) [25 (link),26 (link)], which were known to well characterized in previous studies and decribed highly sensitive to trastuzumab treatment [27 (link),28 ]. SKBR3 cells were maintained in Mc Coy’s 5A medium (Lonza) with L-glutamine containing 10% fetal bovine serum (FBS), 1% penicillin-streptomycin. BT474 cells were maintained in RPMI 1640 medium with L-glutamine (Lonza) supplemented with 10% FBS, 1% penicillin-streptomycin and 2% bovine insulin. The cell lines were cultured in a humidified air supplemented with 5% CO2 at 37°C. Trastuzumab was (kindly gifted by Prof. Dr. Hakan Gürdal from the Department of Pharmacology in Medical School of Ankara University) dissolved in phosphate-buffered saline (PBS) (stock concentration of 300 mg/mL) and stored at 4°C.
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Culturing Breast Cancer Cell Lines

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Human breast cancer cell lines T-47D, MCF7, MDA-MB-361, SK-BR-3, HCC1954, MDA-MB-468, MDA-MB-231, and BT-549 were obtained from the ATCC (Manassas, VA, USA). MCF7, MDA-MB-361, SK-BR-3, and MDA-MB-231 cells were cultured in Dulbecco modified Eagle medium (Lonza, Basel, Switzerland), and T-47D, HCC1954, MDA-MB-468, and BT-549 were maintained in Roswell Park Memorial Institute-1640 medium (Lonza); all media were supplemented with 10% fetal bovine serum (Sigma-Aldrich, St. Louis, MO, USA), penicillin (100 units/mL), and streptomycin (100 mg/mL). All cells were cultured at 37 °C in a humidified atmosphere of 5% carbon dioxide.
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Cell Line Cultivation and Characterization

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NCI-H1993 (CRL-5909), NCI-H441 (HTB-174), SKBR3 (HTB-30), MKN-45 (ACC409), OE33 (ACC706), MCF7 (HTB-22), MDA-MB-231 (HTB-26) and NIH3T3 (CRL-1658) cell lines were obtained from ATCC (http://www.lgcstandards-atcc.org/en.aspx) or DSMZ (http://www.dsmz.de/), tested for mycoplasma infection on a regular basis using a commercial biochemical test (Lonza) and authenticated using STR profiling. All cells were cultured in Dulbecco’s Modified Eagle’s Medium/Nutrient Mixture F-12 Ham, 1:1 mixture supplemented with 10% fetal calf serum (FCS), or in case of MKN45 with 20% FCS. Upon serum withdrawal, FCS was replaced by 0.1% bovine serum albumin.
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Breast Cancer Cell Line Culture Protocols

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The breast cancer cell lines MCF7, T47D, MDA-MB-231, SK-BR-3, MDA-MB-453, MDA-MB-468, Hs578T and MCF10A were acquired from the American Type Culture Collection (ATCC, Manassas, VA, USA), where they are regularly authenticated. The cell lines were grown at 37°C in 5% CO2. Hs578T, MDA-MB-231, MDA-MB-453, MDA-MB-468, and SK-BR-3 cells were maintained in DMEM (Lonza, Basel, Switzerland) containing 10% fetal bovine serum (FBS, Gibco BRL, Grand Island, NY, USA), penicillin (100 units/ml; Gibco) and streptomycin (100 units/ml, Gibco). MCF7 and T47D cells were cultured in RPMI 1640 (Lonza), 10% FBS, penicillin (100 units/ml) and streptomycin (100 units/ml). MCF10A cells were cultured in DMEM/F12 media (1:1) (Invitrogen, Grand Island, NY, USA) supplemented with 5% horse serum (Gibco), 10 μg/ml bovine insulin (Sigma-Aldrich, St. Louis, MO, USA), 20 ng/ml epidermal growth factor (EGF; Sigma), 0.5 μg/ml hydrocortisone (Sigma), 0.1 μg/ml cholera toxin (Sigma), penicillin (100 units/ml), and streptomycin (100 units/ml). Human umbilical vein endothelial cells (HUVECs; Lonza) were maintained in Lonza EGM-MV (normal growth medium) at 37°C in 5% CO2. The cells were maintained in culture plates and used in assays between cell passages 3 and 8.
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Culturing and Maintaining Breast Cancer Cell Lines

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Human breast cancer cells MDAMB231, MDAMB468, MCF-7, SKBR3 and MDAMB361 were purchased from American Type Culture Collection (Rockville, MD, USA). All cell lines were genotyped to confirm their origin. MDAMB231, MCF7 and SKBR3 cells were maintained in DMEM high glucose (Lonza) complemented with 10% fetal bovine serum (FBS; Lonza). MDAMB468 and MDAMB361 were maintained in DMEM-F12 complemented with 10% FBS. All media were supplemented with 10000 U/ml penicillin and 10 mg/ml streptomycin (Lonza) and 4 mM L-glutamine in a humidified atmosphere composed of 95% air and 5% CO2 at 37  °C. Cell lines were regularly inspected for mycoplasma.
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8

Breast Cancer Cell Line Cultivation

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Human breast cancer cell lines MDA-MB-231, MCF-7, BT474, SK-BR-3, ZR-75–1 together with normal breast epithelial cell lines MCF-10A and MCF-12A were obtained from ATCC (Manassas, VA, USA). MDA-MB-231 and SK-BR-3 cell lines were cultured with Dulbecco Modified Eagle Medium (Lonza, NJ, USA) while MCF-7, BT474 and ZR-75–1 cell lines were cultured with DMEM supplemented with 0.1% insulin. MCF10A and MCF-12A cell line was cultured with DMEM (Lonza, NJ, USA) supplemented with 0.1% insulin (0.01 mg/ml), 0.002% EGF (20 ng/ml) (both from Sigma-Aldrich, Saint-Louis, MO, USA). All media were supplemented with 50 U/ml penicillin/streptomycin, 1% non-essential amino acids and 10% fetal bovine serum (Lonza, NJ, USA). All cell lines were tested for mycoplasma contamination regularly using MycoAlert mycoplasma detection kit (Lonza, NJ, USA).
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9

Culturing Prostate and Breast Cancer Cell Lines

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The prostate carcinoma cell lines PC3 and LNCaP and breast carcinoma cell lines MCF7 and SKBR3 were obtained from ATCC (Manassa, VA, USA). The PC3-9 cell line24 (link), a sub-clone of the PC3 cell line, was kindly provided by Immunicon (Huntingdon Valley, PA, USA). PC3, PC3-9 and LNCaP were cultured in RPMI1640 (Lonza), MCF7 and SKBR3 in DMEM (Lonza), all supplemented with 10% FBS (Sigma) and 1% Pen/Strep (Lonza). Cells were cultured at 37° in a humid atmosphere and trypsinized when reaching 70–80% confluence using 0.05% trypsin–EDTA (Gibco, Life Technologies, Waltham, MA, USA).
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10

Culturing Human Breast Cell Lines

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Human breast cell lines (BCCLs), SkBr3, MDA-MB-468, T47D, purchased from the American Type Culture Collection, were cultured in McCoy’s 5A (SkBr3) or Dulbecco’s modified Eagle’s medium (MDA-MB-468, T47D) (Lonza, Slough, UK) supplemented with 5% (T47D) or 10% fetal bovine serum (Lonza). The human normal fibroblast (NF) cell line NHDF (normal human dermal fibroblasts), derived from human normal derma (Lonza) was cultured in Fibroblast Basal Medium (FBM) supplemented with Fibroblast Growth Medium-2 (FGM-2) Bullet kit (Lonza), containing 2% fetal bovine serum (FBS), 0.1% Insulin, 0.1% gentamicin, amphotericin GA 1000, 0.1% fibroblast growth factor (FGF). All cell lines were cultured at 37 °C in 95% humidified air in the presence of 5% CO2 and authenticated with short tandem repeat DNA profiling analysis by the Functional Genomic Unit of the Department of Experimental Oncology at Fondazione IRCCS Istituto Nazionale Tumori of Milano (INT).
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