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5 protocols using af488 conjugated goat anti mouse

1

Immunofluorescence Imaging of E-cadherin and C. rodentium

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Tissues were fixed in 4% phosphate-buffered formaldehyde solution (Fisher Scientific) for 24 hours. Fixed tissue sections were de-paraffinised and antigen retrieval performed in 0.01M sodium citrate buffer. Slides were blocked with goat serum, stained with mouse anti-E-cadherin (BD, 610181) and rabbit anti-C.rodentium antiserum followed by staining with secondary antibodies (AF555-conjugated goat-anti-rabbit and AF488-conjugated goat-anti-mouse from ThermoFisher). Slides were further stained with DAPI (Sigma) and mounted in Fluoromount-G (SouthernBiotech) and visualized using a Leica Confocal SP5-Invert microscope. For staining of eYFP, tissue sections were fixed in 4% paraformaldehyde at 4°C for 16 hours followed by incubation in 30% sucrose for 24 hours. Tissues were embedded in O.C.T. compound (VWR) followed by cryosectioning. Slides were blocked with rabbit serum and stained with AF488-conjugated rabbit-anti-GFP (ThermoFisher, A21311) and AF647-conjugated mouse-anti-E-cadherin (BD, 560062) and visualized using a Leica Confocal SP5-Invert microscope. Image analysis was performed in ImageJ.
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2

Immunofluorescence Imaging of E-cadherin and C. rodentium

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Tissues were fixed in 4% phosphate-buffered formaldehyde solution (Fisher Scientific) for 24 hours. Fixed tissue sections were de-paraffinised and antigen retrieval performed in 0.01M sodium citrate buffer. Slides were blocked with goat serum, stained with mouse anti-E-cadherin (BD, 610181) and rabbit anti-C.rodentium antiserum followed by staining with secondary antibodies (AF555-conjugated goat-anti-rabbit and AF488-conjugated goat-anti-mouse from ThermoFisher). Slides were further stained with DAPI (Sigma) and mounted in Fluoromount-G (SouthernBiotech) and visualized using a Leica Confocal SP5-Invert microscope. For staining of eYFP, tissue sections were fixed in 4% paraformaldehyde at 4°C for 16 hours followed by incubation in 30% sucrose for 24 hours. Tissues were embedded in O.C.T. compound (VWR) followed by cryosectioning. Slides were blocked with rabbit serum and stained with AF488-conjugated rabbit-anti-GFP (ThermoFisher, A21311) and AF647-conjugated mouse-anti-E-cadherin (BD, 560062) and visualized using a Leica Confocal SP5-Invert microscope. Image analysis was performed in ImageJ.
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3

PBMC-derived Macrophage Surface Profiling

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Primary human PBMC–derived macrophages were labeled with FITC-conjugated mouse monoclonal anti-MHCII (11-9956-42, Thermo Fisher Scientific) and APC-conjugated mouse monoclonal anti-CD206 (17-2069-42, Thermo Fisher Scientific) or isotype controls (all Thermo Fisher Scientific) according to the manufacturer’s protocols. In all cases, 20,000 events were acquired using a FACSCalibur flow cytometer (BD Biosciences), and analyzed using FlowJo 9.2 analysis software (Tree Star Inc.). In some cases, macrophages were analyzed for surface expression of FPR2/ALX; surface Fcγ receptors were blocked by incubation for 20 minutes at 4°C with IgG block (Thermo Fisher Scientific), followed by incubation for 30 minutes at 4°C with mouse monoclonal anti–FPR2/ALX (1 μg/106 cells; GM1D6, Aldevron), then incubation for 30 minutes at 4°C with secondary antibody (AF488-conjugated goat anti-mouse, 1:300; Thermo Fisher Scientific).
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4

Immunofluorescence Analysis of E-cadherin and C. rodentium

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Tissues were fixed in 4% phosphate-buffered formaldehyde solution (Fisher Scientific) for 24 hours. Fixed tissue sections were de-paraffinised and antigen retrieval performed in 0.01M sodium citrate buffer. Slides were blocked with goat serum, stained with mouse anti-E-cadherin (BD, 610181) and rabbit anti- C.rodentium antiserum followed by staining with secondary antibodies (AF555- conjugated goat-anti-rabbit and AF488-conjugated goat-anti-mouse from ThermoFisher). Slides were further stained with DAPI (Sigma) and mounted in Fluoromount-G (SouthernBiotech) and visualized using a Leica Confocal SP5- Invert microscope. Image analysis was performed in ImageJ.
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5

Quantitative Analysis of NADPH Oxidase Subunits in BV2 Cells

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Following experimental treatment, BV2 cells cultured in chambered microslides were fixed by incubation in 2% formaldehyde in PBS for 10 min at 4 o C, washed and non-specific antibody binding was minimised by incubation for 30 min at room temperature in PBS containing 10% FCS and 0.05% Triton X-100 (all Thermofisher Scientific, UK). Cells were then incubated with rabbit anti-mouse p67Phox monoclonal antibody (1:500, clone EPR5064, Abcam Ltd, Cambridge, UK) and mouse anti-mouse gp91phox monoclonal antibody (1:50, clone 53, BD Biosciences, UK) overnight at 4°C in PBS with 1% FCS and 0.05% Triton X-100. Cells were washed and incubated with AF488-conjugated goat anti-mouse and AF647-conjugated goat anti-rabbit secondary antibodies (both 1:500, Thermofisher Scientific, UK) in PBS with 1% FCS and 0.05% Triton X-100 at room temperature for 1 hr. Cells were washed with PBS, nuclei were defined by incubation with 180 nM DAPI in ddH2O for 5 min, and cells were mounted under Mowiol mounting solution. Cells were imaged using an LSM710 confocal microscope (Leica, UK) fitted with 405nm, 488nm and 647nm lasers and a 63x oil immersion objective lens (NA 1.4mm, working distance 0.17mm). Images were captured with ZEN Black software (Zeiss, Cambridge, UK) and analysed with ImageJ 1.51w (National Institutes of Health, USA).
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