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3 protocols using csf 1

1

Western Blot Analysis of Signaling Proteins

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The proteins were extracted from the cell pellets. Proteins were boiled for 10 min and loaded onto 4–12% bis Tris gels (Invitrogen, Waltham, MA, USA) for separation. The separated proteins were then blotted onto polyvinylidene difluoride (PVDF) membranes (Invitrogen) with 20% (v/v) methanol in NuPage Transfer Buffer (Invitrogen) at 15 V for 4 h at 4°C. Tris-buffered saline containing 0.01% Tween 20 (TBST) in 5% skim milk (Difco, BD Biosciences, Oxford, UK) was used to block the membranes for 1 h. The blots were washed three times with TBST for 10 min and then incubated overnight at 4 °C with primary antibodies specific to the following target proteins: phosphorylated JAK1, phosphorylated JAK2, phosphorylated STAT1 (1:1000; Cell Signaling Technology, Cambridge, UK), CSF1, IL-6, PTPN6, RAC2, TNFα, IL-1α, IL-1β, phosphorylated STAT3, STAT3 ADORA2A, JAK1, JAK2, STAT1, SOCS3, Bax, Bcl-2, and β-actin (1:1000; Santa Cruz Biotechnology, Santa Cruz, CA, USA). After incubation, the blots were washed thrice with TBST and incubated for 1 h with a horse-radish peroxidase–conjugated secondary antibody (1:3000; Santa Cruz) at 25°C. Finally, the blots were visualized using an enhanced chemiluminescence detection system (Amersham Pharmacia Biotech, Little Chalfont, UK).
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2

Mechanosensitive Signaling in TNBC Cells

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MDA-MB-231 cells were seeded on top of either compliant (1kPa) or stiff (10kPa) gels for 24 hours and treated with or without the FAK inhibitor PF573228 (MilliporeSigma). Cells were rinsed with 1X PBS and lysed with 4X SDS sample buffer (4X Tris-Cl/SDS, pH6.8, 30% v/v glycerol, 10% w/v SDS, 0.09% v/v 2-mercaptoethanol, and 0.012% w/v Bromophenol Blue). Standard SDS-PAGE was conducted usingBio-Rad Any kD Mini-PROTEAN (4569035; Bio-Rad gels and PVDF membranes (Bio-rad). Membrane washing steps were performed with 0.1% polyoxyethylene 20 sorbitan monolaurate (Tween; JT Baker, Phillipsburg, NJ) in Tris-buffered saline. Blocking was performed with 5% milk in the washing buffer. Primary antibodies (GAPDH Biolegend poly6314; CSF-1 Santa Cruz sc-365779) were diluted in blocking buffer at 1:1000 dilution and applied to the membranes overnight at 4°C. Horseradish-peroxidase conjugated secondary antibodies were applied to the membranes in blocking buffer at 1:2000 dilution for 1 hour at room temperature. Membranes were imaged using SuperSignal chemiluminescent substrate and a FujiFilm ImageQuant LAS-4000. Quantification of protein expression was normalized to GAPDH loading control and densitometry was performed using Fiji.
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3

Mechanosensitive Signaling in TNBC Cells

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MDA-MB-231 cells were seeded on top of either compliant (1kPa) or stiff (10kPa) gels for 24 hours and treated with or without the FAK inhibitor PF573228 (MilliporeSigma). Cells were rinsed with 1X PBS and lysed with 4X SDS sample buffer (4X Tris-Cl/SDS, pH6.8, 30% v/v glycerol, 10% w/v SDS, 0.09% v/v 2-mercaptoethanol, and 0.012% w/v Bromophenol Blue). Standard SDS-PAGE was conducted usingBio-Rad Any kD Mini-PROTEAN (4569035; Bio-Rad gels and PVDF membranes (Bio-rad). Membrane washing steps were performed with 0.1% polyoxyethylene 20 sorbitan monolaurate (Tween; JT Baker, Phillipsburg, NJ) in Tris-buffered saline. Blocking was performed with 5% milk in the washing buffer. Primary antibodies (GAPDH Biolegend poly6314; CSF-1 Santa Cruz sc-365779) were diluted in blocking buffer at 1:1000 dilution and applied to the membranes overnight at 4°C. Horseradish-peroxidase conjugated secondary antibodies were applied to the membranes in blocking buffer at 1:2000 dilution for 1 hour at room temperature. Membranes were imaged using SuperSignal chemiluminescent substrate and a FujiFilm ImageQuant LAS-4000. Quantification of protein expression was normalized to GAPDH loading control and densitometry was performed using Fiji.
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