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Black optical bottom plates

Manufactured by Thermo Fisher Scientific

Black optical bottom plates are a type of laboratory equipment used to facilitate optical measurements and analyses. They feature a black bottom surface that minimizes background interference and enhances the contrast of the samples being observed. These plates are commonly used in various applications, such as cell-based assays, high-throughput screening, and fluorescence-based experiments.

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3 protocols using black optical bottom plates

1

RSV Neutralization Assay Protocol

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Neutralization assays were performed as previously described [37 (link)]. Briefly, HEp-2 cells were seeded at a density of 2.4 × 104 cells/well in 384-well black optical bottom plates from ThermoFisher (Cat#142761). Serial 2-fold dilutions were performed on samples, either NHP sera or monoclonal antibodies, in a final volume of 40 µL. The starting dilution was 1:10 for sera and 1:10, 1:200, or 1:500 for the monoclonal antibodies. An equal volume of recombinant mKate-RSV subtype A (strain A2) was added to the diluted samples and incubated at 37 °C for 1 h [38 (link)]. After incubation, 50 µL of each diluted sample-virus mixture was added to the HEp-2 cells and incubated for 37 °C for 24 h. Fluorescence endpoints were recorded at 24 h using excitation at 588 nm and emission at 635 nm (SpectraMax M2e, Molecular Devices, San Jose, CA, USA). The IC50 titer for each sample was determined using a four-parameter non-linear regression curve fit with GraphPad Prism version 7 (GraphPad Software Inc., San Diego, CA, USA), which was then used to calculate the IC50 concentration of each monoclonal antibody or NHP sera.
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2

Quantifying Oxidative Stress in Live Cells

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Oxidative stress in live cultures was assessed with CellROX Green (Life Technologies, #C10444), which remains non‐fluorescent until oxidized by intracellular ROS. The fluorescent signal intensity is proportional to the levels of intracellular free radicals. Cultures were plated in black optical bottom plates (Thermo Fisher, #NUN165305) and incubated in CellROX Green for 30 min after treatment, followed by 2× PBS washes prior to imaging. Images were captured on an Incucyte Zoom in phase contrast and green at 20× magnification (0.61 μm/pixel resolution) with three images per well. Mean Green Intensity was normalized to culture confluence for each image.
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3

Neutralization Assay for Antibody Evaluation

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Neutralization assays were performed as previously described (Crank et al., 2019 (link)). NCI-H28 cells were seeded at a density of 2.4 × 104 cells/well in 384-well black optical bottom plates from ThermoFisher (Cat#142761). Serial 4-fold dilutions of monoclonal antibodies (starting at 1:10 with a total of 11 dilutions) were performed, in a final volume of 45 μL. An equal volume of recombinant mKate-RSV subtype A (strain A2) was added to the diluted samples and incubated at 37°C for 1 h (Hotard et al., 2012 (link)). After incubation, 50 μL of each diluted sample-virus mixture was added to the NCI-H28 cells and incubated for 37°C for 24 h. Fluorescence endpoints were recorded at 24 h using excitation at 588 nm and emission at 635 nm (SpectraMax M2e, Molecular Devices, San Jose, CA, USA). The IC50 and IC80 titers for each sample were determined using a four-parameter non-linear regression curve fit with GraphPad Prism version 7 (GraphPad Software, San Diego, CA, USA). IC50 and IC80 values, calculated as mean of at least two independent experiments.
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