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3 protocols using cd95 apc

1

Multiparameter Flow Cytometry Assay

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Conjugated antibodies and staining reagents included MIP-1β-PE, CD3-PB, CD3-PE-Cy7, CD3-PerCP-Cy5.5, CD3-APC-Cy7, CD3-Horizon V450, CD4-PerCP-Cy5.5, CD4-AmCyan, CD4-FITC, CD8α-APC, CD8α-APC-Cy7, CD8α-AlexaFluor700, CD8α-FITC, CD8α-APC-H7, CD69- ECD (Beckman Coulter), CD20-Horizon V450, CCR7-FITC (R&D Systems), CD95-APC, CCR7-PerCP-Cy5.5, CD28-PE-Cy7 (eBioscience), granzyme B-AlexaFluor700, perforin-FITC (MabTech), IFNγ-PE-Cy7, TNFα- AlexaFluor700, IL-2-APC, CD95-PE, CD95-APC, and Aqua LIVE/DEAD Fixable Dead Cell Stain (Invitrogen). All reagents are from BD Biosciences unless indicated otherwise. For construction of monomers and tetramers, the following peptides were synthesized and purified to >95% by HPLC by New England Peptide LLC: p11C (CTPYDINQM), p54AS (TVPWPNASL), p54E660 (TVPWPNETL), p68A (STPPLVRLV), and TL8 (TTPESANL). The monomers and tetramers were prepared as previously described [85] (link), [86] (link). Tetramers were prepared using either streptavidin-PE (Prozyme), -APC (Prozyme), -AlexaFluor488 (Invitrogen), or -Qdot655 (Invitrogen). Monomers used in surface plasmon resonance studies were further quantified using an RC DC protein kit (Bio-Rad).
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2

Identification of B Cell Subsets in Mice

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To identify the different B cell populations, two stains were performed in splenocytes from 4 to 5.5 month old mice (2 females and 1 male wt, and 4 females Kmt2d−/−). First, to identify transitional, follicular and marginal zone populations, cells were stained with CD21-FITC (Biolegend, clone 7E9, #123407), CD5-PE (eBioscience, clone 53–7.3 #12-0051-81), CD23-PECY7 (Biolegend, clone B3B4 #101613), IgM-APC (Biolegend, clone RMM-1 #406509), and B220-Alexa700 (Biolegend, clone RA3 #103232). To identify intermediate plasma cells/plasmablast (IPC), plasma cells (PC) and germinal center populations, cells were stained with GL7-FITC (Biolegend, clone GL7 #144003), CD138-PE (Biolegend, clone 281-2 #142503), CD95-APC (eBioscience, clone 15A7 #17-0951-80), B220-Alexa700 (Biolegend, clone RA3 #103232). To determine the percentages of cell populations, values were normalized by % B220+ single live cells (single cells, 7-AAD negative. B220+). 7-AAD (Life Technologies) was used to identify dead cells. Data acquisition was performed in a BD LSR II Flow Cytometer (BD Biosciences) and analysis was performed with FlowJo software (Tree Star).
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3

Enrichment of Primary Hepatocytes

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Enrichment for primary hepatocytes (PH) was performed by re-suspending the liver parenchymal fraction in HBSS/10%FBS at 107 cells/ml, followed by incubation with CD95-Biotin conjugate (1:100, eBioscience) for 30 min at 4°C. Excess unbound primary antibody was removed via washing and centrifugation at 400 × g for 10 min at 4°C; the resulting cell pellet was resuspended in 90 μl of de-gassed MACS buffer/107 total cells, followed by magnetic labeling with Anti-Biotin micro-beads (Miltenyi Biotec Inc., Auburn, CA) per the manufacturer's specifications. Magnetic separation was performed using an appropriate MACS column in the magnetic field of a VarioMACS separator, with CD95-expressing primary hepatocytes collected as eluate (Fig. 1B). Hepatocytes were assessed for cell surface marker expression by staining with the following rat anti-mouse antibody conjugates (Table S1): CD95-APC, EpCAM/CD326-PE-Cy7, CD45-eFluor 780, and c-Kit-PE (1:100; eBioscience). Single cell suspensions were washed at 50 × g and 4°C for 3 min, and resuspended in HBSS/10% FBS with 10 μg/ml PI, followed by flow cytometry using a FACSAria cell sorter.
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