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3 protocols using cy5 affinipure donkey anti rabbit igg

1

Immunofluorescence Staining Protocol

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The detailed information on the compounds, antibodies and reagents is listed in Supplementary Table 1. The secondary antibodies included the following: Cy3 AffiniPure Donkey Anti-Goat IgG (H+L) (705-165-147), Alexa Fluor 488 AffiniPure Donkey Anti-Rabbit IgG (H+L) (711-545-152), Cy2 AffiniPure Donkey Anti-Mouse IgG (H+L) (715-225-151), Cy5 AffiniPure Donkey Anti-Rabbit IgG (H+L) (711-175-152), Alexa Fluor 488 AffiniPure Donkey Anti-Rat IgG (H+L) (712-545-153), Cy3 AffiniPure Donkey Anti-Rat IgG (H+L) (712-165-153), peroxidase-AffiniPure Goat Anti-Rabbit IgG (H+L) (111-035-003) and AffiniPure Donkey Anti-Rat IgG (H+L) (712-005-153) were purchased from Jackson ImmunoResearch (West Grove, PA, USA).
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2

High-Content Imaging of NF-κB Translocation

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For high-content imaging, RA-FLSs were cultured on CellCarrier-384 Ultra Microplates (PerkinElmer). After stimulation, FLSs were fixed in 4% formaldehyde and permeabilized with 0.1% Triton X-100. After blocking with 1% BSA, FLSs were stained with primary antibody (anti-NF-κB P65, Abcam) overnight at 4°C. After incubation with a fluorophore-coupled secondary antibody (Cy5 AffiniPure donkey anti-rabbit IgG, Jackson ImmunoResearch) FLSs were counterstained with DAPI and imaged in an Opera Phenix high-content screening system (PerkinElmer). Images from automated imaging were analyzed in CellProfiler v.3.0.0 (http://cellprofiler.org/citations/). Nuclei were detected from the DAPI signal and used to define a nuclear and a perinuclear region. The P65 signal was quantified in both regions, and log2 ratios of nuclear-to-perinuclear mean intensities were calculated for every cell. Plotting and statistical analysis were performed in R v.3.4.3.
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3

Placental Histopathology and Immunofluorescence

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Placentas were fixed in 4% paraformaldehyde in phosphate buffered saline overnight and then processed into paraffin blocks. Midline cross-sections were cut 5 μm thick. To determine phenotypical differences of the placentas, H and E staining was performed by the UNC Animal Histopathology and Lab Medicine Core and then imaged using a Zeiss Axio Image.A2. For immunofluorescence identification of uterine natural killer (uNK) cells, dendritic (CD11c) cells, and smooth muscle actin (αSMA), placentas were de-paraffinized using a clearing reagent and then rehydrated using a series of ethanol washes. Following antigen retrieval, sections were then blocked with 5% normal donkey serum and incubated overnight at 4°C with the primary antibody CD11c (Proteintech, 17342-1-AP;1:50) or anti-α-Smooth Muscle Actin (Sigma-Aldrich, clone 1A4, A2547; 1:100) and incubated the next day with secondary antibodies including Cy™5 AffiniPure donkey anti-rabbit IgG (Jackson ImmunoResearch; 711-175-152; 1:200), Cy™2 AffiniPure donkey anti-rabbit IgG (Jackson ImmunoResearch; 711-225-152; 1:200), FITC-conjugated DBA lectin (Sigma-Aldrich; L9142; 1:200), and Hoechst (Sigma-Aldrich; B1155; 1:500). Images were acquired using an IX83 Olympus microscope with a Hamamatsu digital camera with cellSens dimension software (Olympus).
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