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4 protocols using fumarase

1

Enzymatic Assays for Citric Acid Cycle

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Freshly isolated cells were suspended in 0.5 ml of buffer containing 1 mM Tris–HCL (pH 7.4). Aconitase and fumarase activity were measured according to manufacturer’s instructions (Abcam). Aconitase measures the conversion of citrate to isocitrate, whereas fumarase measures the conversion of fumarate to malate. Enzymatic activity was quantified based on absorbance at 450 nm at 37 °C and results were normalized to protein concentration.
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2

Enzyme Activity Assays for Key TCA Cycle Enzymes

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Activity assays for pyruvate dehydrogenase (PDH; Abcam, Cambridge, UK), α-ketoglutarate dehydrogenase (α-KGDH; Antibodies Online, Aachen, Germany), isocitrate dehydrogenase (IDH; Sigma-Aldrich), and fumarase (Abcam) were performed according to the manufacturer's instructions.
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3

Mitochondrial Protein Expression Analysis

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ADSCs were lysed using RIPA lysis buffer, and the total protein concentration was measured with a BCA protein assay kit (all from ThermoFisher Scientific). The transferred protein on the PVDF membrane (Millipore) was blocked with 5% non-fat milk for 1 h, followed by incubation with primary antibodies overnight at 4 °C. After washing with TBST, the PVDF membrane was incubated with the corresponding HRP-conjugated second antibody (1:1000, Cell Signaling Technology) at room temperature for 1 h. The primary antibodies used were: β-Actin (1:1,000), Tom20 (1:1000), Hexokinase 1 (HK1, 1:1000); Hexokinase 2 (HK2, 1:1000); Phosphofructokinase (PFK, 1:1000); Lactate dehydrogenase A (LDHA, 1:1000); Citrate Synthase (CS, 1:1000); Dihydrolipoamide succinyltransferase (DLST, 1:1000), Succinate dehydrogenase A (SDHA, 1:1000), and Fumarase (FH, 1:1000) (all obtained from Abcam). Mitochondrial fission factor (MFF, 1:1000); Mitofusin 2 (MFN2, 1:1000); Opticatrophy protein 1 (OPA1, 1:1000) (all obtained from Proteintech).
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4

Western Blot Analysis of Cellular Metabolism

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UMSCs were lysed in RIPA lysis buffer (Thermo Fisher Scientific), and total protein concentration was measured with BCA protein assay kit (Thermo Fisher Scientific). The PVDF membrane (Invitrogen) transferred protein was blocked with 5% non-fat milk and then incubated with primary antibodies overnight at 4 ℃. After washing with TBST for three times, the PVDF membrane was incubated with corresponding HRP-conjugated second antibody (1:1000, Cell Signaling Technology) at room temperature for 1 h. The primary antibody information is as follows, Bcl-2 (1:1000, abclonal), cleaved Caspase-3 (1:1000, abclonal), glutathione peroxidase 4 (GPX4, 1:1000); hexokinase 1 (HK1, 1:1000); hexokinase 2 (HK2, 1:1000); phosphofructokinase (PFK, 1:1000); lactate dehydrogenase A (LDHA, 1:1000); citrate synthase (CS, 1:1000); aconitase 2 (ACO2, 1:1000); fumarase (FH, 1:1000); succinate dehydrogenase A (SDHA, 1:1000); all were obtained from Abcam.
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