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Dimethyl sulfoxide (dmso)

Manufactured by Cambridge Isotopes
Sourced in United States

DMSO (Dimethyl Sulfoxide) is a colorless, odorless, and polar aprotic solvent. It has a high boiling point and is miscible with water and many organic solvents. DMSO is commonly used as a solvent in various laboratory and industrial applications.

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6 protocols using dimethyl sulfoxide (dmso)

1

TCDD Preparation and Dilution Protocol

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TCDD dissolved in dimethyl sulfoxide (DMSO) at 50 µg/mL (#ED-901-B, Cambridge Isotope Laboratories, Inc., USA) was further diluted with DMSO (Sigma-Aldrich, USA) to generate a final working dilution of 1.33 µM. This allowed us to add an equal volume of TCDD (0.75 µl/ml) in supplemented media as described below.
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2

Calf Thymus DNA Binding Analysis

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Calf-thymus DNA (CT-DNA) was purchased from Sigma-Aldrich Ltd (Brazil) and used without previous purification. A 1.078 mM solution of CT-DNA was prepared by dissolving an adequate weight of this macromolecule in a deuterated phosphate buffer. The pH 7.2 phosphate D2O buffer was prepared by dissolving disodium hydrogen phosphate (Na2HPO4.12H2O, 0.1180 g) and sodium dihydrogen phosphate (NaH2PO4.2H2O, 0.0217 g) in 10.00 mL D2O (99.9%, Cambridge Isotopes Laboratories, Inc. with pH 7.2) to make a 0.046 M solution. The (CBLAU)( BF4- ) complex was dissolved in a 5:95% v/v of DMSO (99.8% Cambridge Isotopes Laboratories, Inc.) and deuterated buffer respectively. BF4- was used as a counter ion together with 5% of DMSO-d6 to increase the solubility of the Ru-complex in aqueous solution. All 1H NMR and STD-NMR spectra were recorded using a 1:100 (DNA:CBLAU) molar ratio, in a final volume of 500 μL transferred to a 5 mm NMR tube (Norrel, Inc. USA). For the epitope mapping experiment, the final concentration of CBLAU was 5 mM and the concentration for the CT-DNA was 50 μM. On the other hand, for the concentration-dependent STD-NMR experiment, the CBLAU and lawsone concentrations were ranged from 5 to 1 mM. In these experiments, the CT-DNA concentration was fixed in 50 μM. For these studies, 7 independent STD-NMR experiments were acquired for each concentration.
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3

Synthesis and Characterization of [Bpy][DCA] Ionic Liquid

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The pyridinium-based
IL [Bpy][DCA] was purchased from Linzhou Keneng Material Technology
Co, Ltd with a purity of 99 wt %. [Bpy][DCA] is a dark yellow liquid
at room temperature, and it was further dried in the vacuum oven at
348.15 K for 96 hours. Water content was measured using the Karl Fischer
coulometric titration, and the final water content was below 0.1 wt
%. The purity of [Bpy][DCA] was confirmed by 1H NMR using
a JEOL JNMECA 600 NMR spectrometer: δH (600 MHz,
DMSO, TMS/CCl4), 8.7 (2H, d, C2,6–H),
8.09 (1H, t, C4–H), 7.63 (2H, t, C3,5–H), 4.2 (2H, t, C7–H), 1.38 (2H, m, C8–H), 0.69 (2H, m, C9–H), 0.21 (3H,
t, C10–H). Also, DMSO (>99%) and DMSO-d6 (D, 99.8%) were purchased from Cambridge Isotope
Laboratories without further purification.
The binary mixtures
of [Bpy][DCA]–DMSO and [Bpy][DCA]–DMSO-d6 were prepared according to a series of molar concentrations.
The mole fractions of DMSO-d6 in the mixtures
of [Bpy][DCA]–DMSO-d6 were 0.1001,
0.1960, 0.3000, 0.3982, 0.4977, 0.5979, 0.7008, 0.7988, and 0.9004.
The mole fractions of DMSO in the binary solutions were 0.0979, 0.2030,
0.3036, 0.4001, 0.5009, 0.5999, 0.7001, 0.7994, and 0.8998. Also,
one set of experiments included two samples of pure ILs and pure small
molecular solvents (DMSO or DMSO-d6).
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4

Edoxaban Quantification in Blood Plasma

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Gold-coated silicon nanopillar substrates were purchased from Silmeco (Copenhagen, Denmark). The HPLC grade acetonitrile, formic acid, pharmaceutical grade edoxaban, and human blood plasma were purchased from SIGMA ALDRICH (St. Louis, MO, USA) and used under human research ethics exemption given by Queensland University of Technology (number 1800001209). All aqueous solutions were prepared using deionised water (18.2 MΩ cm). Dimethyl sulfoxide (99.9%) was purchased from Cambridge Isotope Laboratories, Tewksbury, MA 01876, United States.
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5

Synthesis and Characterization of Copolymers

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Chemicals used for monomer and polymer synthesis included sodium hydroxide, hydrobenzoic acid, dibromohexane, 1-methyl-2-pyrrolidinone, SA monomer, and triethylene glycol purchased from Sigma Aldrich (St. Louis, MO, USA). Acetic anhydride, ethyl ether, petroleum ether, chloroform, methylene chloride, hexane, acetone, sulfuric acid, potassium carbonate, dimethyl formamide, toluene, acetonitrile, N,N-dimethylacetamide, and acetic acid were purchased from Fisher Scientific (Fairlawn, NJ, USA); 4-p-fluorobenzonitrile was purchased from Apollo Scientific (Cheshire, UK). For 1H NMR analysis of the copolymers, deuterated chloroform and dimethyl sulfoxide were purchased from Cambridge Isotope Laboratories (Andover, MA, USA). The N-terminal region of a recombinant PspA (UAB055, PspA/Rx1 AA1 to 303, clade 2 PspA of the PspA family 1) was produced by Dr. David McPherson (University of Alabama at Birmingham) as described previously (55 (link)). Prior to immunization, endotoxin was removed from the protein using endotoxin removal beads (Miltenyi Biotec, Bergisch Gladbach, Germany) according to the manufacturer’s instructions followed by dialysis and lyophilization. The final endotoxin content of the protein was determined to be less than 1.9 EU/mg as determined by a limulus amebocyte lysate chromogenic endotoxin quantification kit (Thermo Fisher Scientific).
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6

Deuterium-labeled NMR Characterization

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Samples were prepared as ~5 mg/mL solutions in deuterium-labeled chloroform (Acros Organics, Waltham, MA, USA), dimethylsulfoxide (Cambridge Isotope Laboratories, Tewksbury, MA, USA), or methanol (CDN Isotopes, Pointe Claire, Canada). 1H-NMR spectra were measured on a Varian Unity Inova 400 MHz spectrometer. Chemical shifts were reported in parts per million (ppm). Results can be found in the supporting information section.
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