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75 protocols using recombinant murine il 2

1

T Cell Activation and Expansion

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T cells were cultured in RPMI-1640 Medium (Sigma-Aldrich) containing 10% Fetal Bovine Serum (Sigma-Aldrich), 2% penicillin-streptomycin (Sigma-Aldrich) and 2 mM l-Glutamine (Sigma-Aldrich). For antigen-induced activation, total splenocytes isolated from OT-II mouse spleens were cultured with OVA 323–339 peptide (1 mg/ml, InvivoGen) and recombinant murine IL-2 (20 ng/ml, PeproTech). For anti-CD3/CD28-induced activation, CD4+ T cells were stimulated with Dynabeads Mouse T-Activator CD3/CD28 (Gibco) and recombinant murine IL-2 (20 ng/ml, PeproTech), following manufacturer’s instructions.
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2

Regulation of CD4+ T Cell Activation by EV

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Naive splenic CD4+ T lymphocytes were captured using negative selection magnetic beads (Miltenyi Biotec, Germany). These cells were stimulated with αCD3/αCD28 beads (Thermo Fisher, USA) and 5 ng/ml of recombinant murine IL‐2 (Peprotech, USA) for 48 h while also being co‐cultured with 2×109 particles/mL of EKO‐BMDM‐EV, or WT‐BMDM‐EV, or PBS. Measurements of T lymphocyte activation were assessed using flow cytometric detection of CD69 and CD25. For detection of IFN‐γ, naive splenic CD4+ T lymphocytes were stimulated with αCD3/αCD28 beads (Thermo Fisher, USA) and 5 ng/ml of recombinant murine IL‐2 (Peprotech, USA) for 12 h while also being co‐cultured with 2×109 particles/mL of EKO‐BMDM‐EV, or WT‐BMDM‐EV, or PBS. Cells were cultured in the presence of the Protein Transport Inhibitor cocktail (Invitrogen, USA). They were then permeabilized using the Foxp3/Transcription Factor Staining Buffer Set (eBioscience, USA) and stained with anti‐IFNγ (clone XMG1.2) at 1:100 concentration for 60 min in room temperature according to the manufacturer's protocol.
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T Cell Differentiation Under Polarizing Conditions

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Naïve CD4+ T cells (CD4+TCRβ+CD1d-αGCNK1.1CD44CD62Lhi) were FACS sorted from the pooled spleens of IRE1αF/F (n = 5) and CD4cre;IRE1αΔ/Δ mice (n = 5), resuspended in complete RPMI 1640 media containing polarizing cytokines and plated at 1 × 105 cells/well in 96-well plates coated with anti-CD3ε/α-CD28 (3 μg/ml, 5 μg/ml). Plated CD4+ T cells were differentiated under TH1-polarizing conditions using recombinant murine IL-12 (10 ng/ml, eBioscience), recombinant murine IL-2 (10 ng/ml, eBioscience), and anti-IL-4 (10 μg/ml, eBioscience); TH2-polarizing conditions using recombinant murine IL-4 (10 ng/ml, eBioscience), recombinant murine IL-2 (10 ng/ml) and anti-IFNγ (10 μg/ml, eBioscience); and TH17-polarizing conditions using recombinant murine IL-6 (20 ng/ml, eBioscience), recombinant murine IL-23 (10 ng/ml),55 , recombinant murine IL-1β (10 ng/ml, PSF, VIB), recombinant human TGFβ1 (2 ng/ml, eBioscience), anti-IL-4 (10 μg/ml), anti-IFNγ (10 μg/ml) and anti-IL-2 (10 μg/ml, eBioscience), respectively. Cells were then removed from TCR stimuli after 3 days, resuspended at 1 × 106/ml in fresh media and cultured in a new 96-well plate without TCR stimuli for 2 days. 1 × 106 polarized T cells were then resuspended in complete RPMI 1640 medium and restimulated using anti-CD3ε/CD28 (3 μg/ml, 5 μg/ml; eBioscience).
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4

Murine and Human CD8+ T Cell Culture

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Murine CD8+ T cells were isolated (STEMCELL, 19853) and activated with 1 μg/mL αCD3 (eBioscience, 16-0031-86) and 2.5 μg/mL αCD28 (eBioscience,16-0281-82) for 2 days prior to subculture in the presence of 20 U/mL recombinant murine IL-2 (Peprotech, 50-813-288).
For human T cell culture, frozen negatively isolated CD8+ T cells (Hemacare, PB08NC1) were activated with CD3-CD28 Dynabeads (Gibco, 11131D) for 72 hours in the presence of 20 U/mL IL-2 (Roche, 11011456001) and 5 ng/mL IL-7 (Peprotech, 200-07) and IL-15 (Peprotech, 200-15). Cells were subcultured with fresh media and cytokines.
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Cytokine Regulation of Immune Cells

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The inhibitors PD98059, SP600125, SB203580, LY294002, BAY11–7082, and Stattic were purchased from MCE (Shanghai, China). Recombinant murine IL-2 and IL-12 were purchased from PeproTech (Rocky Hill, USA). CFSE were purchased from Invitrogen/Thermo Fisher Scientific. IL-6, IL-10 and IL-21 neutralizing antibodies were purchased from R&D Systems. Lymphocyte separation media were purchased from MultiSciences (Hangzhou, China). All other reagents were obtained from Sigma-Aldrich (St. Louis, MO).
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6

PDAC Organoids Potentiate CD8+ T Cell Killing

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Mouse PDAC cells stably expressing OVA and carrying doxycycline (Dox)-inducible mTurquoise2-Atg4BC74A were grown as organoids, treated with or without Dox (1 μg/mL) for 96 hrs. Organoids were dissociated into single cells, which were then incubated with either anti-H-2Kb-SIINFEKL antibody (clone 25-D1.16, BioXCell, BE0207) or isotype control (clone MOPC-21, BioXCell, BE0083) at 100 μg/mL for 30 min at 4 °C. Total splenocytes were harvested from OT-I mice and CD8+ T cells were enriched using Dynabeads® Untouched™ Mouse CD8 Cells (Invitrogen, 11417D) following manufacturer’s instructions. Isolated CD8+ T cells were labelled with 10 μM CFSE (BioLegend) for 10 min at RT in the dark, washed 3x with RPMI-1640 supplemented with 10% FBS. Ten thousand PDAC cells and forty thousand CD8+ cells were seeded in 96-well plates and cultured in 100 μL 50% DMEM and 50% RPMI-1640 supplemented with 10% FBS, 10 ng/mL recombinant murine IL-2 (Peprotech), 27.5 μM 2-Mercaptoehanol (Gibco), and 100 μg/mL of respective antibodies. After 48 hrs, CD8+ T cells were harvested and stained with anti-CD8a antibody (AF647, clone 53–6.7, BioLegend) and DAPI, and proliferation was analyzed by CFSE dilution using flow cytometry. After removal of CD8+ T cells, the viability of remaining PDAC cells were measured by CellTiter-Glo (Promega).
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7

Molecular Inhibitors for Cell Signaling

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Chemical inhibitors used included 1uM MG132 (S2619; Selleckchem), 1.3 uM Chir911, 1 uM Rapamycin (S1039, Selleckchem), 1uM Torin2 (S2817; Selleckchem), 1 ug/mL DON (D2141, Sigma-Aldrich), 1 ug/mL alpha keto-glutarate (K2000; Sigma-Aldrich), 0.1 mM actinomycin D (114666; Calbiochem), 100 ug/mL cyclohexamide (C7698; Sigma-Aldrich), 1uM 2DG (D6134; Sigma-Aldrich), and 1 or 5 uM JQ1 (A1910; Apexbio). Cytokines included recombinant murine IL-7 (5 ng/mL) (217-17; Peprotech), recombinant murine IL-2 (5 ng/mL) (212-12; Peprotech), and recombinant murine GMCSF for BMDC generation (1000 U/mL) (31503; Peprotech).
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8

IL-2/anti-IL-2 and N-803 treatment for bm12 graft

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For each mouse, 1 μg of recombinant murine IL-2 (PeproTech) was combined with 10 μg anti-mouse IL-2 (clone S4B6; BioXCell) in 200 μL Hank’s Balanced Salt Solution (HBSS), then incubated overnight at 4°C while mixing. For each control mouse, 1 μg of recombinant murine IL-2 was incubated overnight with 10 μg rat IgG2a (BioXCell) in 200 μL HBSS. As a pre-disease treatment, each mixture was intraperitoneally injected every other day for a total of 3 injections, after which a bm12 splenocyte graft was injected the following day (see above). As a post-disease treatment, injections were administered once daily for three days beginning one month after graft injection [29 (link)].
Experimental mice received 200 μg/kg of N-803 (provided via collaboration with Altor Biosciences, now part of NantWorks LLC) in PBS injected subcutaneously, while control mice received a molar equivalent of recombinant human IL-15 (Peprotech) in PBS. As a pre-disease treatment, two injections were administered, once every other day, finishing one day prior to bm12 graft injection. As a post-disease treatment, injections were administered once weekly over the course of 3 months, beginning 1 week after bm12 graft injection (for a total of 11 treatments).
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9

Single Cell Isolation from Lymphoid Tissues

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Single cell suspensions from LNs, spleens and thymus were generated by passing them through a 40 μm cell strainer. BM cells were isolated by flushing out femur and tibia. TILs were isolated by dissociating tumor tissue in the presence of collagenase D (1 mg/ml, Roche) and DNAse I (0.25 mg/ml, Sigma) for 45 min before passing through a 40 μm cell strainer. For LN cells activation, 4 × 105 total tdLN cells were cultured with Dynabeads™ mouse T-activator CD3/CD28 (Gibco) in a ratio 1:1 for 48 h. Recombinant murine IL-2 (1000 U/ml, Peprotech) and recombinant murine IL-33 (20 ng/ml, Immunotools) were added where indicated.
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10

Cytokine and Antibody Staining Protocol

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Recombinant murine IL-2, IL-4, IL-6, IL-7, IL-12, IL-15, IL-21, IL-23, IFN-γ, and TGF-β were purchased from PeproTech. Mouse IFN-β was purchased from PBL Biomedical Laboratories. LCMV GP33 peptide (KAVYNFATM; specific for P14 TCR) was purchased from Bioneer. Cell suspensions of spleen, LN, or thymus were prepared and stained for FACS analysis with the fluorochrome-conjugated antibodies. Detailed information of the antibodies used is depicted in Supplementary Table 2. To stain intracellular Nur77, Ki-67, CD107a, and Granzyme B, splenocytes were stained for cell surface markers, fixed and permeabilized using eBioscience Foxp3/Transcription Factor Staining Buffer Set (eBioscience) and then stained with fluorochrome-conjugated intracellular antibodies. Flow cytometry samples were run using a LSRII or FACSCanto II (BD Biosciences) using FACSDiva software (BD Biosciences) and analyzed by FlowJo software (Tree Star). The gating strategies are depicted in Supplementary Fig. 8.
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