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12 protocols using sinigrin hydrate

1

Extraction and Quantification of Phytochemicals in Broccoli

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Sulfatase (from Helix pomatia), sinigrin hydrate, sephadex A-25, sodium acetate, orthophosphoric acid, sinapic acid, ferulic acid, gallic acid, 3-O-caffeoylquinic acid (3-O-CQA), lutein, chlorophyll a (from Anacystis nidulans algae) and chlorophyll b (from spinach) were obtained from Sigma-Aldrich Co. (St. Louis, MO, USA) and desulfoglucoraphanin was obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Acetonitrile (HPLC grade) and methanol (HPLC grade) were obtained from Desarrollo de Especialidades Químicas, S.A. de C.V (Monterrey, México), ethanol (HPLC grade) and methyl tert-butyl ether (MTBE, HPLC grade) were obtained from Control Técnico y Representaciones, S.A. de C.V (Monterrey, México). Deionized water (18.2 MΩ·cm resistance) was used in all procedures and was obtained from a Milli-Q Element water purification system (Millipore, Bedford, MA, USA).
Broccoli (Brassica oleracea L., var. italica, cv. Waltham 29) seeds, Sun Gro Horticulture’s Canadian Sphagnum peat moss substrate and Landmark Plastic Corporation’s propagation trays were obtained from IMAISA (Monterrey, México).
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2

Extraction and Analysis of Phytochemicals from Broccoli

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Sulfatase (from Helix pomatia), sinigrin hydrate, sephadex A-25, sodium acetate, orthophosphoric acid, sinapic acid, ferulic acid, and gallic acid and 3-O-caffeoylquinic acid (3-O-CQA) were obtained from Sigma-Aldrich Co. (St. Louis, MO, USA) and desulfoglucoraphanin was obtained from Santa Cruz Biotechnology (Dallas, TX, USA). Acetonitrile (HPLC grade) and methanol (HPLC grade) were obtained from Desarrollo de Especialidades Químicas, S.A. de C.V (Monterrey, NL, México), and ethanol (HPLC grade) was from Control Técnico y Representaciones, S.A. de C.V (Monterrey, México). Deionized water (18.2 MΩ·cm resistance) was used in all procedures and was obtained from a Milli-Q Element water purification system (Millipore, Bedford, MA, USA).
Broccoli (Brassica oleracea L., var. italica, cv. Waltham 29) seeds, Sun Gro Horticulture’s Canadian Sphagnum peat moss substrate and Landmark Plastic Corporation’s propagation trays were obtained from IMAISA (Monterrey, NL, México).
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3

Anticancer Compounds Screening on Cell Lines

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Sinigrin hydrate, TBA hydrogen sulfate, sodium acetate, potassium sulfate, and DEAE-Sephadex A-25 were procured from Sigma-Aldrich (St. Louis, MO, USA). Enzyme sulfatase (Helix pomatia Type H-1), Dulbecco’s modified Eagle’s medium (DMEM), trypsin, ethylenediaminetetraacetic acid, penicillin-streptomycin solution, fetal bovine serum, trypan blue, MTT, and Annexin V-FITC apoptosis detection kit were obtained from Thermo Fisher Scientific (Waltham, MA, USA). Caspase-3 activity assay kit was obtained from Elabscience (Houston, TX, USA). Human prostate cancer cell line (DU-145), human colon adenocarcinoma cell line (HCT-15), and human melanoma cell line (A-375) were generously provided by the National Centre for Cell Science (Pune, Maharashtra, India). All the cells were grown in DMEM culture media. HPLC grade methanol, water, and ACN were purchased from SD Fine-Chem (Mumbai, Maharashtra, India).
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4

Quantitative Analysis of Sulfatase Activity

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Sulfatase from Helix pomatia, sinigrin hydrate, l-ascorbic acid (AA), trichloroacetic acid (TCA), dl-dithiothreitol (DTT), N-ethylmaleimide (NEM), 2,2′-bipyridyl, iron (III) chloride (FeCl3), 3-O-CQA (3-O-caffeoylquinic acid), 5-O-CQA (5-O-caffeoylquinic acid), butyl-isothiocyanate, caffeic acid (CA), 1,2-benzenedithiol, ß-mercaptoethanol (HPLC grade), methylene chloride (HPLC grade), sephadex A-25, sephadex C-25, acetonitrile (HPLC grade), methanol (HPLC grade), sulforaphane, sodium acetate, potassium phosphate, and orthophosphoric acid (H3PO4) were obtained from Sigma Chemical Co. (St. Louis, MO, USA). Desulfoglucoraphanin was obtained from Santa Cruz Biotechnology (Dallas, TX, USA).
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5

Quantification of Glucoraphanin and Sulforaphane

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Glucoraphanin potassium salt was purchased from Chromadex (Irvine, CA). Sinigrin hydrate and sulforaphane were provided by Sigma-Aldrich (St. Louis, MO). Citric acid, disodium hydrogen phosphate, ethylene diamine tetra acetic acid (EDTA), dimethyl sulfoxide (DMSO), glacial acetic acid, ammonium acetate, HPLC-grade methanol and HPLC-grade acetonitrile were purchased from RCI Labscan (Bangkok, Thailand), while HPLC-grade water was supplied by Sithiporn (Bangkok, Thailand).
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6

Extraction of Glucosinolates from Kimchi Waste

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Kimchi cabbage by-products (outer leaves and cortex) were collected from a kimchi manufacturing plant (Sup. Fig. 1 a, b). (−)-Sinigrin hydrate (GLS standard) and chitosan (low molecular weight, 50,000–190,000 Da) were purchased from Sigma-Aldrich (St. Louis, MO, USA). HPLC-grade water and methanol (MeOH) were purchased from Merck & CO., Inc. (Kenilworth, NJ, USA). Medium chain triglyceride (MCT), glycerol monostearate (GMS), and tween 80 (T80) were obtained from Daejung Chemicals (Seoul, Korea). Lipases from porcine pancreas, bile extract porcine, pepsin from porcine gastric mucosa, and pancreatin from porcine pancreas were purchased from Sigma-Aldrich (St. Louis, MO, USA).

Effect of extraction conditions on GLS content: (a) methanol concentration, (b) ultrasonication, (c) time, and (c) amplitude. Different letters indicate a significant difference at p < 0.05 (n = 3).

Fig. 1
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7

Sulfatase-Catalyzed Isothiocyanate Analysis

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Sulfatase (from Helix pomatia), (DL)-sulforaphane (90%), indole-3-carbinol, indole-3-carboxaldehyde, indole-3-carboxylic acid, indole-3-acetonitrile (I3-ACN), 3,3’-diindolylmethane and (−)-sinigrin hydrate were purchased from Sigma-Aldrich (St. Louis, MO, USA). Standards were dissolved in methanol to obtain solutions of 1 mg/mL stock solutions. Formic acid and HPLC grade methanol and acetonitrile were purchased from Fisher Scientific (Waltham, MA, USA). HPLC-grade water was prepared from distilled water using a Milli-Q system (Millipore Lab., Bedford, MA, USA).
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8

Comprehensive Natural Compound Library Acquisition

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Sinigrin hydrate, vanillic acid, amygdalin, L-canavanine, phloridzin dihydrate,
umbelliferone, rutin hydrate, salicin, gallic acid, naringin, sinapic acid,
gramine, caffeine, sucrose, allyl isothiocyanate, coumarin, methyl jasmonate,
brilliant blue FCF and sulforhodamine B were purchased from Sigma-Aldrich (St.
Louis, MO, USA). Glucoiberin potassium salt and glucobrassicin potassium salt
were purchased from Extrasynthese (Lyon, France). Gluconapin potassium salt and
gluconasturtiin potassium salt were purchased from ChromaDex (Irvine, CA, USA).
Quinine, chloroquine, denatonium and indole were purchased from Aladdin
(Shanghai, China). Salicylic acid and jasmonic acid were purchased from TCI (TCI
Shanghai, China). Berberine was purchased from Macklin (Shanghai, China).
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9

Quantification of 3-O-caffeoylquinic acid

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Sulfatase from Helix pomatia, sinigrin hydrate, sephadex A-25, 3-O-caffeoylquinic acid (3-O-CQA), acetonitrile (HPLC grade), methanol (HPLC grade), sodium acetate, MeJA, and orthophosphoric acid were obtained from Sigma Chemical Co. (St. Louis, MO, USA). ET was purchased from Infra (Naucalpan, MEX, Mexico). Acetic acid was purchased from Desarrollo de Especialidades Quimicas (Monterrey, NL, Mexico). Desulfoglucoraphanin was obtained from Santa Cruz Biotechnology (Dallas, TX, USA).
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10

Rapid Quantification of Glucosinolates

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All the reagents used were chosen of analytical grade. A phosphate buffer solution was prepared in distilled water using 50 mM KH2PO4 and 50 mM KCl, pH = 6.0, purchased from Carlo Erba. CB-PBNP powder was prepared using K3Fe(CN)6 and HCl 37% (w/w) obtained from Sigma Aldrich, and FeCl3 obtained from Fluka. CB N220 of industrial standard grade was obtained from Cabot Corporation (Italy). N, N-dimethylformamide (DMF) was from Merck Millipore. Glucose, sinigrin hydrate, and GOx enzyme were purchased from Sigma Aldrich. Myr enzyme of 38 U/mL, 50 U/mg of specific activity, and purification factor of 71 was kindly provided by Dr. Eleonora Pagnotta from the laboratory of the Council for Research in Agriculture and Agrarian Economy (CREA) placed in Bologna (Italy). Indian mustard, brown mustard seeds (Brassica Juncea L.) used as a real matrix sample were purchased from a local market. The chronoamperometric analyses were performed using the chronoamperometric technique performed by a portable MultiEmStat3 (PalmSens, Netherlands) at a fixed potential of 0.0 V for 300 s.
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