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21 protocols using nerve growth factor (ngf)

1

Isolation and Culture of Primary DRG Neurons

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DRG neurons were isolated from male and female wild-type or Gαq−/− mice of 2-7 days after birth following sacrifice by cervical dislocation and cultured as described previously (Than et al., 2013 (link), Zhang et al., 2008 (link)). Briefly, isolated DRGs were treated with type IV collagenase (Worthington, LS004186) followed by trituration. The dissociated DRG neurons were then seeded onto coverslips coated with poly-L-lysine (Sigma, P9155) and laminin (BD, 354232) and maintained in DMEM media (Thermo fisher, 11564446) containing 10% fetal bovine serum (Thermo Fisher, 11550356), 2mM L-glutamine, 100IU/ml penicillin, 100 μg/ml streptomycin supplemented with 5 μM cytosine β-D-arabinofuranoside (Sigma, C1768) and 50ng/ml nerve growth factor (Promega, G5141). The cultured DRG neurons were used within 24 hours after isolation.
HEK293 cell line was purchased from ATCC, and MEF cells derived from Gαq/11−/− mice were obtained from Prof. Stefan Offermanns (Max-Planck-Institute, Germany) as described previously (Zhang et al., 2012 (link)). The cells lines were maintained in high glucose DMEM media containing 10% fetal bovine serum, 100IU/ml penicillin and 100 μg/ml streptomycin at 37°C in a humidified incubator (5% CO2). Cells were used between 15 and 30 passage numbers. The cell lines were derived from embryos and the sex of these cell lines is thus not available.
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2

Optimizing PKC Signaling Assays

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F-12 media, heat-inactivated horse serum, glutamine, penicillin, streptomycin, 5-fluoro-2-deoxyuridine, uridine, NuPAGE 4–12% Bis-Tris Gels and PVDF membranes were obtained from Thermo Fisher Scientific (Waltham, MA). PDBu, Bis I, Gö6976 and BCTC were obtained from Tocris-BioTechne (Minneapolis, MN). The myristolyated PKCα/β peptide inhibitor (Myr-RFARKGALRQKNV) and nerve growth factor were obtained from Promega (Madison, WI) and Envigo (Indianapolis, IN), respectively. 4α-PDBu and the RIPA lysis buffer were obtained from Santa Cruz (Dallas, Texas) and EMD Millipore (Billerica, MA), respectively. Bis VIII was obtained from Cayman Chemical (Ann Arbor, Michigan). The CGRP antibody was a kind gift provided by Dr. M. Iadarola (National Institute of Health). All other reagents were purchased from Sigma Aldrich (St. Louis, MO).
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3

Culturing Dorsal Root Ganglia Neurons

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DRG were collected and placed into F-12 Nutrient Mixture (Ham; Gibco) supplemented with 0.1% collagenase type IV (Worthington). Thereafter, DRG were triturated and cell suspensions centrifuged at 600 RPM for 6 min. Pellets were resuspended in fresh DRG medium supplemented with NGF (10 ng/ml; Promega), and plated on poly-L-ornithine (100 µg/ml, Sigma-Aldrich)-pre-coated glass coverslips. Cultures (10,000–22,500 cells/well) were incubated at 37 °C for 24 h. In the experiments where miR-21 was overexpressed, cultured neurons were transduced with a green fluorescent protein (control) or miR-21 lentiviral vector24 (link) and were incubated at 37 °C for 72 h.
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4

Dissociation and Culture of Rat DRG Neurons

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DRGs from adult male Sprague-Dawley rats were dissected and dissociated as described previously (Calcutt et al., 2017 (link); Sabbir et al., 2018 (link)) and cultured in defined Hams F12 media containing 10mM D-glucose (N4888, Sigma, St Louis, MO, USA) supplemented with modified Bottenstein's N2 additives without insulin (0.1 mg/ml TF, 20 nM progesterone, 100 μM putrescine, 30 nM sodium selenite, 0.1 mg/ml BSA; all additives were from Sigma, St Louis, MO, USA) (Akude et al., 2011 (link); Roy Chowdhury et al., 2012 (link); Saleh et al., 2013 (link); Calcutt et al., 2017 (link)). In all experiments, the media was also supplemented with 0.146 g/L L-glutamine, a low dose cocktail of neurotrophic factors (0.1 ng/ml NGF, 1.0 ng/ml GDNF and 1 ng/ml NT-3 – all from Promega, Madison, WI, USA), 0.1 nM insulin and 1X antibiotic antimycotic solution (A5955, Sigma).
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5

Preparation of DRG Neuron Cultures

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DRG neurons’ cultures were prepared by collecting DRGs from the first cervical to the sixth lumbar segment into Ham’s nutrient F12 culture medium (Sigma) supplemented with 2% Ultroser G (Pall SA, Saint-Germain-en-Laye, France), 1 mM glutamine (Invitrogen, Waltham, USA), 50 IU/ml penicillin (Invitrogen, Waltham, USA) and 50 μg/ml streptomycin (Invitrogen, Waltham, USA). Following incubation in 2000 U/ml collagenase type IV (Worthington Biochemical Corp., Lakewood, USA) for 3 h, DRG were triturated, and the cells were plated onto poly-DL-ornithine (Sigma)-coated glass coverslips. Cells were grown for 24 h, at 37 °C in the supplemented medium, to which the nerve growth factor (NGF, 50 ng/mL; Promega, Southampton, UK) was added.
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6

Intracellular Calcium Signaling Assay

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Carvacrol, AITC, phorbol 12-myristate 13-acetate (PMA), forskolin (FSK) and ionomycin were all purchased from Sigma-Aldrich (Gillingham, UK). Fura-2 AM was purchased from Invitrogen (Paisley, UK), H89 from Cayman Chemical (Ann Arbor, USA), and NGF from Promega (Southampton, UK). Stock solutions of Fura-2, AITC, PMA, FSK, H89 and ionomycin were prepared in DMSO. The working concentration of DMSO did not exceed 0.1%. NGF was dissolved in PBS. Carvacrol was dissolved in HEPES-buffered extracellular solution.
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7

Liraglutide Neuroprotection in OGD Model

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PC12 cells were purchased from the Type Culture Collection of the Chinese Academy of Sciences (Shanghai, China). They were cultured in Dulbecco’s modified Eagle’s medium (DMEM; Gibco, Grand Island, NY, USA) supplemented with 10% fetal bovine serum (Gibco, Grand Island, NY, USA), 100 U/ml of streptomycin, and 100 U/ml of penicillin in an environment of 5% carbon dioxide at 37°C. After attachment, the cells were treated with 50 ng/ml of nerve growth factor (NGF; Promega, Madison, WI, USA) and cultured in serum-free DMEM for 6 days to induce neurite formation. Subsequently, cells were subjected to an in vitro oxygen-glucose deprivation (OGD) insult for 8 h with a mixed gas consisting of 95% nitrogen and 5% carbon dioxide. Meanwhile, the culture medium was replaced with glucose-free DMEM. LY294002 (10 μM) was used for 30 min before other treatment. After the OGD, the culture medium was replaced with original medium, and liraglutide was added. The plates were continually cultured in a normoxic incubator for reoxygenation in an atmosphere of 5% carbon dioxide at 37°C for 24 h. The cells of the control group were cultured under normal conditions without oxygen or glucose deprivation.
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8

Quantification of Inflammatory Cytokines

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The inflammatory cytokine expression levels in each sample were determined using the enzyme-linked immunosorbent assay. Frozen IVD samples were pulverized, homogenized, and digested in a tissue lysis reagent. TNF-α, IL-6, NGF, and total protein assays were performed according to the manufacturers' protocols and quantified by measuring the reaction absorbance at 450 nm using a microplate reader (TNF-α/IL-6, R&D Systems, Minneapolis, MN, USA; NGF, Promega, Madison, WI, USA; total protein, Bio-Rad, Hercules, CA, USA). Cytokine expression levels were then normalized to the total protein levels for further analysis.
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9

Multiplex Salivary Cytokine and Neuropeptide Profiling

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Simultaneous profiling of multiple cytokines in addition to a set of brain-derived proteins (endocrine, neuropeptide) was performed in saliva samples in the cytokine reference laboratory located in the University of Minnesota Department of Pediatrics using a commercially available 22-plex Human Cytokine Array Panel (LUH000, R&D Systems, Minneapolis, MN, USA). Salivary levels of cytokines/chemokines, agouti-related peptide (AgRP), and prolactin were determined by multiplex method on the Luminex platform (Austin, TX, USA) with Bioplex software (BioRad, Hercules, CA, USA) using human-specific bead sets from Millipore (Billerica, MA, USA). Enzyme-linked immunosorbent assays (ELISAs) were used to determine levels of cortisol (Alpco Diagnostics), dynorphin A (Phoenix Pharmaceuticals), neuropeptide Y (RayBiotech), somatostatin (BACHEM—Peninsula Labs), and NGF (Promega). Values were interpolated from standard curves of the relevant recombinant human proteins set up on each plate. Dilution series and standard curves were run for all samples; all assays were performed in duplicate.
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10

Measurement of Neurotrophic Factors in MCAO

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The concentration of brain-derived neurotrophic factor (BDNF; Promega, Germany), glial cell line-derived neurotrophic factor (GDNF, Promega), vascular endothelial growth factor (VEGF; R&D Systems, United States), nerve growth factor (NGF; Promega), basic fibroblast growth factor (bFGF; R&D Systems) and epidermal growth factor (EGF; R&D Systems) was measured by enzyme linked immunosorbent assay (ELISA) in left (ischemic) hemispheres 84 days after MCAO as described before (Doeppner et al., 2012a (link)).
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