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Generbox microaer

Manufactured by bioMérieux
Sourced in France

Generbox microaer is an automated microbiological incubation system designed for the culture and identification of aerobic microorganisms. The device provides a controlled environment for the incubation of samples, maintaining optimal temperature and atmospheric conditions for the growth of target microorganisms.

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4 protocols using generbox microaer

1

Isolation of Campylobacter from Meat and Milk

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Isolation of Campylobacter spp. from meat and milk was conducted in compliance with the EN ISO 10272-1:2006 method with slight modification. Briefly, meat and cheese (25 g) were homogenized for 2 min in a stomacher with 225 mL buffered peptone water (Oxoid Limited, Basingstoke, United Kingdom) in the sterile plastic bags. Then, 10 mL of the homogenate solution and 10 ml of raw milk was added to 90 mL of Bolton broth containing the Bolton broth selective supplement and 5% laked horse blood (Oxoid Limited, Basingstoke, United Kingdom) and incubated at 42 °C for 48 h under microaerobic conditions (Generbox microaer-BioMerieux, Marcy l’Etoile, France). Next, the bacterial suspension was spread onto CCDA plates (Oxoid Limited, Basingstoke, United Kingdom) and then incubated at 42 °C for 48 h under microaerobic conditions. Characteristic growth from the CCDA plates was transferred to a blood plate (Columbia agar containing 5% cattle blood, Oxoid Limited, Basingstoke, United Kingdom) and incubated overnight at 42 °C. Colonies suspected as Campylobacter spp. were examined for cell morphology, motility, and oxidase reactions. Putative Campylobacter colonies were frozen at −80 in Microbanks (Pro-Lab Diagnostics, Birkenhead, United Kingdom) until species differentiation using polymerase chain reaction (PCR).
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2

Isolation of Campylobacter from Water Samples

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Isolation of Campylobacter spp. from water samples was performed according to International Organization for Standardisation (2019) . We filtered 100 ml of water sample through 0.45μm filters (Merc Millipore, Burlington, USA) and then each filter was transferred to 90 ml of Bolton broth (Oxoid Limited, Basingstoke, United Kingdom). The broth was incubated at 41°C in a microaerophilic atmosphere (Generbox microaer-BioMerieux, Marcy l’Etoile, France) for 48 hours and after preincubation 10μl of culture was performed on a solid CCDA medium (Oxoid Limited, Basingstoke, United Kingdom). Characteristic growth from the CCDA plates was transferred to a blood plate (Columbia agar containing 5% cattle blood, Oxoid Limited, Basingstoke, United Kingdom) and incubated overnight at 41°C. Colonies suspected as Campylobacter spp. were examined for cell morphology, motility, and oxidase reactions. Putative Campylobacter colonies were frozen at -80 in Microbanks (Pro-Lab Diagnostics, Birkenhead, United Kingdom) until species differentiation.
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3

Antimicrobial Susceptibility Testing of H. pylori

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Antimicrobial susceptibility testing Susceptibility to amoxicillin (AMX), clarithromycin (CL), tetracycline (TC) and metronidazole (MTZ) was determined by E-test (AB Biodisc; Solna). A strip was placed on Columbia agar supplemented with 7% of sheep blood with pre-plated, examined strain of H. pylori. The incubation was performed in microaerophilic conditions (Generbag or Generbox microaer; bioMerieux) at the temperature of 37 °C for 3 days. Resistance breakpoints of H. pylori were used and interpreted according to CLSI (AMX -0.5 mg/L, CL -1 mg/L, TC -4 mg/L, MTZ -8 mg/L) and according to EUCAST (AMX -0.12 mg/L, CL -0.5 mg/L, TC -1 mg/L, MTZ -8 mg/L).
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4

H. pylori Antibiotic Susceptibility in Poland

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Evaluation of drug susceptibility was performed on the total of 108 strains of H. pylori originating from adult patients from West Poland. All the strains were isolated from gastric mucosa before treatment. Group 1 involved 66 strains isolated in years of 1998/1999. Group 2 comprised 42 isolates obtained in years of 2013/2014. Biopsies isolated from the prepyloric portion were immediately placed in a transport medium (Portagerm pylori; bioMerieux). The obtained biopsies were plated on Columbia agar supplemented with 7% of sheep blood and a set of antibiotics (H. pylori selective supplement Dent SR 147E; Oxoid). The incubation was performed in microaerophilic conditions (Generbag or Generbox microaer; bioMerieux) at the temperature of 37 °C for 4-7 days. For the drug susceptibility test a suspension of grown bacteria was used, in PBS, manifesting density 2 in McF scale. The cultured strains were identifi ed based on colony morphology, Gram staining and urease and catalase tests. All the research protocols were reviewed and approved by the Ethics Committee of the Poznan University of Medical Sciences, Poland.
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