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8 protocols using hydrop

1

Visualizing Intracellular Hydrogen Peroxide

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Intracellular H2O2 was visualized using HYDROP (Goryo Chemical Inc.) as described previously [13 (link)]. Briefly, cells in glass-bottom dishes (Matsunami Glass) were cultured in RPMI 1640 with 50 μM H2O2 for 1 h. After washing out the H2O2 twice with RPMI 1640, the cells were treated with 2.5 μM HYDROP in RPMI 1640 at 37 °C for 20 min. Then, the cells were washed twice with RPMI 1640. Fluorescence images were obtained using a BZ-8000 fluorescence microscope (KEYENCE) with a GFP-BP filter. ImageJ software was used to measure fluorescence intensity.
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2

Antibody Sources and Reagents for Cell Signaling

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Rabbit anti-CLDN1, mouse anti-CLDN4, and rabbit anti-ZO-1 antibodies were obtained from Thermo Fisher Scientific (San Diego, CA, USA). Goat anti-β-actin and mouse anti-FLAG antibodies were from Santa Cruz Biotechnology (Santa Cruz, CA, USA) and Wako Pure Chemical (Osaka, Japan), respectively. Mouse anti-p-Ser and anti-p-Thr antibodies were from Sigma-Aldrich (Saint Louis, MO, USA). EBGP, LY, H2DCFDA, and PMA were from Yamada Bee Company, Inc. (Lot: LY-009, Okayama, Japan), Biotium (Fremont, CA, USA), Thermo Fisher Scientific, and LC Laboratories (Woburn, MA, USA), respectively. OxiOrange and Hydrop were from Goryo Chemical (Hokkaido, Japan). All other reagents were of the highest grade of purity available.
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3

ALOX12 Overexpression and Lipid Peroxidation

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For ALOX12 overexpression, full-length ALOX12 in pCDNA3 vector (a kind gift from Dr. Torii, Gunma University, Gunma) was used. The plasmid was purified using QIAGEN Plasmid Midi Kit (QIAGEN GmbH, Hilden, Germany). Transfection was conducted using Lipofectamine® 2000 as recommended by the manufacturer (1.6 µg DNA was transfected per 1 mL medium). Internal H2O2 and HNE, plasma membrane lipid peroxidation, were detected via 2.5 µM HYDROP (Goryo Chemical Inc.) and mouse anti-HNE antibody (Japan Institute for the control of aging, Shizuoka, Japan; 1:200 dilution) as described previously [18 (link)]. Fluorescence images were obtained from 3 separate dishes for each treatment.
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4

Visualization of Intracellular H2O2 Using HYDROP

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Internal H2O2 was visualized using HYDROP™ (Goryo Chemical Inc., Hokkaido, Japan) as previously described.17 Briefly, cells in glass‐bottomed dishes (Matsunami Glass Ind., Ltd., Osaka, Japan) were cultured in RPMI 1640 with or without 50 μmol/L H2O2 for 10 min, 30 min, 1 h, and 2 h. The cultured cells were washed with noncontaining H2O2 RPMI 1640 twice to remove the H2O2 from the medium, and subjected to treatment with 2.5 μmol/L HYDROP™ in RPMI 1640 at 37ºC for 20 min. Subsequently, the cells were washed with RPMI 1640 twice, and fluorescence images were obtained using a BZ‐8000 fluorescence microscope (Keyence Corporation, Osaka, Japan). The ImageJ software (Rasband, W.S., ImageJ, U.S. National Institutes of Health, Bethesda, Maryland, USA, http://rsb.info.nih.gov/ij/, 1997‐2012) was used to measure fluorescence intensity.
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5

Monitoring Intracellular Iron Dynamics

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Nuclight Red cell lines were seeded at 20,000/well (SYO WT, SYO-OE, FUJI WT, and FUIJI OE) in a 96-well plate. Cell lines were incubated with each probe per the manufacturer's protocol. Fe3+ (Ferrum 430, Ursa BioScience), Fe2+ (FeRhoNox-1, Goryo Chemical), and H2O2 (HYDROP, Goryo Chemical). Wells were imaged every 15 minutes over 1 hour, and analyzed using IncuCyte image analysis software (Sartorius). Probe excitation was quantified using and IncuCyte FLR imaging system (Sartorius).
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6

Detecting Cellular Oxidative Stress

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Cells were treated with 10 μM hydroxyphenyl fluorescein (HPF; Goryo Chemical) or 5 μM HYDROP (Goryo Chemical) and then incubated for 30 min at 37 °C in the dark. After washing with PBS, the fluorescence images were obtained using a confocal fluorescence microscope (LSM700; Zeiss) at an excitation wavelength of 488 nm. The mean fluorescence intensity of HPF or HYDROP was quantified using ImageJ.
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7

Quantifying Cellular Iron and Oxidants

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Nuclight Red cell lines were seeded at 20,000/well (SYO-WT, SYO-OE, FUJI-WT and FUIJI-OE) in a 96 well plate. Cell lines were incubated with each probe per the manufactures protocol. Fe3+ (Ferrum 430™, Ursa BioScience), Fe2+ (FeRhoNox™-1, Goryo Chemical), and H2O2 (HYDROP™, Goryo Chemical). Wells were imaged every 15 minutes over 1 hour, and analyzed using IncuCyte image analysis software (Sartorius, Ann Arbor, MI). Probe excitation was quantified using and IncuCyte FLR imaging system (Sartorius, Ann Arbor, MI).
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8

Fluorescent Probes for ROS Quantification

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Production of hydroxyl radical ( Á OH) and hypochlorous acid (HClO) were measured using the OxiORANGE reagent (Goryo Chemical, Sapporo, Japan). H 2 O 2 and NO were detected by HYDROP and diaminofluorescein-FM diacetate (DAF-FM DA) (Goryo Chemical), respectively. Cells plated in a 96-well Black IsoPlate (PerkinElmer, Waltham, MA, USA) were incubated with 0.5 µM OxiORANGE, 1 µM HYDROP, or 1 µM DAF-FM DA diluted in EMEM containing FBS for 30 min at 37 °C, and then washed with 100 µL Hank's balanced salt solution (HBSS) once. Fluorescence (Ex/Em = 535/595 nm for OxiORANGE, 485/ 535 nm for HYDROP and DAF-FM DA) was measured by using FilterMax F5 (Molecular Devices, San Jose, CA, USA). Normalized values were obtained by dividing the fluorescent intensities of HYDROP by protein concentration, those of DAF-FM DA by nuclear signal, and those of Oxi-ORANGE by nuclei number determined by Hoechst 33342 staining (Dojindo). Lipid peroxide was measured using the Liperfluo reagent (Dojindo). Cells were stained with 1 µM Liperfluo reagent diluted in EMEM without FBS for 30 min at 37 °C, and then observed under an all-in-one fluorescence microscope BZ-9000 (Keyence, Osaka, Japan).
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