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5 protocols using gapdh

1

Hypoxia Signaling Pathway Analysis

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CoCl2 (#232696, Sigma‐Aldrich) and verteporfin (VP; #5305, Tocris Bioscience) were purchased from Sigma‐Aldrich and Bio‐Techne, respectively. The antibodies were used consist of HIF‐1α (#127309, GenTex), YAP (#H00010413‐M01, Abnova), phospho‐Paxillin Tyr118 (#69363s, BD Biosciences), Paxillin (#611051, BD Biosciences), Hoechst 33342 (#H1399, Invitrogen), GAPDH (#100118, GenTex). The secondary antibody recognized the primary antibody consisting of AlexaFluor® 488 and AlexaFluor® 594 antibodies (#ab150077, #ab150113 and #ab150116, Abcam). The secondary antibody used for western blotting was horse radish peroxidase (HRP) conjugated IgG (#115‐035‐003 and 115‐035‐003, Jackson ImmunoResearch Laboratories).
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2

Immunoblotting Protocol for Protein Detection

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Immunoblotting was performed using standard protocols. Antibodies were diluted in 5% milk powder in TBS-T, and protein detection was carried out with horseradish peroxidase-coupled secondary antibodies (ThermoFisher Scientific, A16110 and A16072) and exposed to X-ray film. The following primary antibodies were used: Olig2 (1:3000; Millipore, AB9610), GAPDH (1:1000; GenTex, GTX627408), p53 (1:500; Cell Signaling, 2524), V5 tag (1:1000; eBioscience, 14679682); histone H3 (1:2000; Abcam, AB24834).
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3

Immunoblotting of Neural Transcription Factors

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Immunoblotting was performed using standard protocols. Antibodies were diluted in 5% milk powder in PBS Triton 0.1%, and protein detection was carried out with HRP-coupled secondary antibodies and X-ray films. The following primary antibodies were used: FOXG1 (1:15; hybridoma clone 17B12), SOX2 (1:400; R&D Systems), GAPDH (1:1000; GenTex), and V5 tag (1:1000; eBioscience).
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4

Immunoblot Analysis of N2a Cell Lysates

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N2a cells were plated in a 6-well plate at a density of 1.5 × 105 cells per well. After 24 h, cells were infected with virus followed by transfection as previously described [6 (link)]. After 48 hours to transfection, cells were washed for 2 min thrice with PBS and lysed in cold lysis buffer (1% Triton X-100, 1 mM phenyl methylsulfonyl fluoride in PBS) for 1 h. The lysates were centrifuged at 12,000 g for 20 min. Total cell extracts were resolved by sodium dodecyl sulfate-polyacrylamide gel electrophoresis, transferred to nitrocellulose membranes, and then probed with an antibody (NS1, 1:5,000), followed by goat anti-rabbit IgG-HRP-conjugated antibody. GAPDH (1:5,000; GENTEX) was used as a loading control.
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5

Immunoblotting of Cell Signaling Proteins

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Immunoblotting was performed using standard protocols. Antibodies were diluted in 5% milk powder in PBS Triton 0.1%, and protein detection was carried out with HRP-coupled secondary antibodies and X-ray films. The following primary antibodies were used: LRIG1 (1:100, R&D, AF3688), EGFR (1:1000, D38B1, Cell Signaling, #4267), EGFR-p (1:1000, Tyr 1068, Cell Signaling, #3777), pSMAD1-5 (1:1000, Cell Signaling, #9516), SMAD1 (1:1000, Cell Signaling, #9743), ppERK1/2 (1:1000, Cell Signaling #9101), ERK1/2 (1:1000, Cell Signaling 4695), Phospho-AKT (Ser473) (1:1000, Cell Signaling #9271), AKT (1:2000, CST #9272), SOX2 (1:1000, Abcam #92494), GAPDH (1:50000; GenTex, GTX627408). β-ACTIN (1:5000, Sigma #A5316). No accutase was used for splitting the cells from the plate.
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