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11 protocols using 600 mhz nmr

1

NMR-based Stereochemistry Determination

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A sample containing a mixture of natural compounds 1 and 2 was purged with nitrogen gas overnight and dissolved in 250 μl of dried pyridine-d5. Dimethylaminopyridine (DMAP) (0.5 mg) and 5 μl of S- or R-α-methoxy-(trifluoromethyl)phenylacetyl chloride (MTPA-Cl) solution (2% v/v) were added and incubated for 18 h. The reaction mixtures were dried in vacuo and resuspended in CDCl3. 1H NMR spectra was collected on an Agilent 600 MHz NMR in a 3-mm tube, and the ΔδS-R values were quantified to determine the absolute configuration.
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2

Characterization of 1-oxa-4-azaspiro[4.5] Deca-6,9-diene-3,8-dione Derivatives

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NMR spectra were recorded on a Mercury 400 MHz NMR, Varian, Palo Alto, CA, USA and an 600 MHz NMR, Agilent Technologies Inc. Palo Alto, California, USA(CDCl3 was the solvent and TMS was the internal standard). MS spectra were measured on Bruker Daltonics Data Analysis 3.4 Mass Spectrometer, Bruker, Karlsruhe, Germany and Thermo LTQ Orbitrap-XL Mass Spectrometer (Thermo Scientific, Waltham, MA, USA). A YRT-3 melting point instrument (Tianda Tianfa Company, Tianjin, China) was used for measuring melting points, where the measured temperature was uncorrected. HSGF 254 high-efficiency thin-layer chromatography silica gel plates were purchased from Huiyou Development Co., Yantai, Shangdong, China. Ltd. HSGF 254 thin-layer silica gel (300 mesh ~ 400 mesh) was purchased from Ocean Chemical Plant (Qingdao, Shangdong, China). The reagents used were analytically pure unless otherwise specified, and the solvents used were dried by conventional methods. (NMR spectra (1H and 13C) of all 17 1-oxa-4-azaspiro[4.5] deca-6,9-diene-3,8-dione derivatives are provided in Supplementary Materials).
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3

NMR-based Stereochemistry Determination

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A sample containing a mixture of natural compounds 1 and 2 was purged with nitrogen gas overnight and dissolved in 250 μl of dried pyridine-d5. Dimethylaminopyridine (DMAP) (0.5 mg) and 5 μl of S- or R-α-methoxy-(trifluoromethyl)phenylacetyl chloride (MTPA-Cl) solution (2% v/v) were added and incubated for 18 h. The reaction mixtures were dried in vacuo and resuspended in CDCl3. 1H NMR spectra was collected on an Agilent 600 MHz NMR in a 3-mm tube, and the ΔδS-R values were quantified to determine the absolute configuration.
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4

Comprehensive NMR Spectroscopic Analysis

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The 1H- and 13C-NMR spectra for all compounds were obtained on a Varian 600 MHz NMR at 25 °C. Spectra of all compounds were obtained in methanol-d4 and DMSO-d6. Detailed analysis of resolution-enhanced spectra (peak picking, integration, multiplet analysis) was performed using Varian NMR and ACD/NMR processor Academic Edition software. The NMR spectra and chemical shifts of isolated compounds were compared with published data.
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5

Comprehensive Structural Characterization

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Nuclear magnetic resonance spectra (1H NMR and 13C NMR) and high-resolution mass spectra (HRMS) were used to structural characterization. 1H NMR and 13C NMR were recorded with a nuclear magnetic resonance spectrometer (600MHz NMR; Varian Corporation, Palo Alto, CA, USA) in either CDCl3 or CD3OD by using trimethylchlorosilane as an internal standard. The NMR signals were described with symbols s for singlet, d for doublet, t for triplet, m for multiplet. Chemical shifts (δ) were reported in ppm and coupling constants (J), are reported in hertz (Hz). HRMS was recorded with a Bruker BioTOFIIIQ system (Bruker Corporation, Billerica, MA, USA). Fluorescence spectroscopy was determined by using a Varian fluorescence spectrophotometer (Cary Edlipse; Varian Corporation). NIR absorption spectroscopy was determined by using a Shimadzu Spectrophotometer (UV-3600; Shimadzu Corporation, Kyoto, Japan). NIR imaging was performed by using a Kodak In-Vivo FX Professional Imaging System (Rochester, NY, USA).
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6

Comprehensive Characterization of TCO-RGD

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TCO-RGD was synthesized according to our previous study43 (link). High-resolution mass spectra (HRMS) were performed on a Bruker OTOF-Q II mass spectrometer. 1H NMR spectra were recorded with a Varian 600 MHz NMR with trimethylchlorosilane as an internal standard. The fluorescence spectra were measured in an Edinburgh Instruments’ FLS1000. The imaging experiments in vitro were recorded on an Olympus FV 10i confocal fluorescent microscope, and the fluorescent signals of DAPI were recorded by blue channel (excitation 405 nm, emission 461 nm) and NIR dyes by red channel (excitation 640 nm, emission 665 nm). In vivo fluorescence imaging analysis was carried out in an IVIS Kinetic imaging system (Living Image Software version 4.5, excitation 660 nm, emission 710 nm). FACS analysis was detected with a BD Accuri C6 flow cytometry (BD CFlow Plus Software version 1.0.264.21), and fluorescent signals were recorded by FL4 channel (excitation 640 nm, emission 675 nm).
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7

Characterization of KmTx8 with Cholesterol

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Standards were prepared by adding 2.0 mg (7.08 mM) KmTx8 in 200μL MeOD with 10μL CDCl2 to a 3 mm NMR tube. Helium was used to remove dissolved O2 and achieve cleaner NMR signals. HSQC and ROESY experiments were completed using a Varian 600 MHz NMR at 25°C. The HSQC data for Region II of the molecule (oxygenated carbons) is shown in blue above. In a separate NMR tube, 2.0 mg (7.08 mM) 8 in 200μL MeOD and 0.2 mg (2.46 mM) cholesterol in 10μL CDCl2 were combined and data acquired identically to the standard. The HSQC is shown in red above. The two data sets were then overlaid utilizing MestReNova 7.0.3–8830. This process was repeated using 0.3 mg cholesterol dissolved in CDCl2.
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8

Comprehensive Characterization of TiO2 Nanoparticles

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LC–MS grade water and isopropanol were purchased from Fisher Scientific (Bridgewater, NJ, USA). Nanoparticles of anatase titanium dioxide, zinc oxide (<100 nm BET or <50 nm XRD), rutile titanium dioxide single crystal substrate with exposed <100> facet (10 × 10 × 0.5 mm) and juglone were purchased from Sigma-Aldrich (MO, USA). 4, 4′-dichlorodiphenyltrichloroethane was purchased from Dr Ehrenstorfer GmbH (Bgm, Schlosser, Germany). Acetone and ethanol was purchased from Guoyao (Tianjing, China). In the low-mass region of negative ion mode, the mass spectrometer was calibrated with free fatty acids. Conductive sticky alumina tape was purchased from Junke (Shanghai, China). All standard fatty acids (including C4:0, C6:0, C8:0, C10:0, C12:0, C14:0, C16:0, C18:0, C20:0 and C22:0) were purchased from Nu-ChekPrep Inc (MN, USA). In the low-mass region of positive ion mode, the mass spectrometer was calibrated with polyethylene glycol (PEG) standard that was purchased from Waters (Milford, USA). Surfaces of rutile titanium dioxide crystalline were characterized with a Jeol JSM-6700F scanning electron microscope (MA, USA). NMR experiments were performed on a Varian 600 MHz NMR (CA, USA).
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9

Spectroscopic Analysis of Organic Compounds

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Optical rotation was measured on a JASCO P-1020 digital polarimeter (Tokyo, Japan). UV data were recorded on a JASCO V-530 UV/VIS Spectrophotometer (Tokyo, Japan). CD spectrum was acquired on a JASCO J-815 CD spectrometer (Tokyo, Japan). High-resolution ESIMS data were obtained on a Bruker APEX II spectrometer (Billerica, MA, USA). IR spectrum was measured on a Perkin Elmer system 2000 FT-IR spectrophotometer (Waltham, MA, USA). NMR spectra were obtained by Varian 600 MHz NMR (San Carlos, CA, USA). Merck silica gel 60 (Billerica, MA, USA) and Sephadex LH-20 (Stockholm, Sweden) were used for column chromatography. The instrumentation for HPLC was composed of a Shimadzu LC-10AD pump (Kyoto, Japan) and a Shimadzu SPD-M10A PDA detector (Kyoto, Japan).
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10

Phytochemical Analysis by Chromatography and Spectroscopy

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Sephadex (GE healthcare) LH-20 and silica gel 60 (Merck KGaA, Darmstadt, Germany) were used for open-column chromatography (CC). Luna C18, phenyl-hexyl (5 μm, 250 × 10 mm, Phenomenex, Torrance, CA, USA) semi-preparative columns were used for high-performance liquid chromatography (HPLC). HPLC instrument used a Shimadzu LC-10AT pump with an SPD-20A UV-Vis detector. The UV spectra were obtained by using a Jasco UV-530 ultraviolet spectrophotometer (Jasco, Tokyo, Japan), whereas the IR spectra were obtained on a Jasco FT-IR-4600 spectrophotometer (Jasco, Tokyo, Japan). Optical rotations were measured with a Jasco P-1020 digital polarimeter (Jasco, Tokyo, Japan). NMR spectra were obtained using JEOL JNM ECS 400 MHz (JEOL, Tokyo, Japan), Varian 600 MHz NMR (Varian, Palo Alto, CA, USA), and Bruker AVIIIHD700X 700 MHz spectrometers (Bruker, Bremen, Germany). ESI–MS data were collected on a VG Biotech Quattro 5022 mass spectrometer (VG Biotech, Altrincham, UK). High-resolution ESI–MS data were obtained with a Bruker APEX II spectrometer (Bruker, Bremen, Germany). Circular dichroism spectra were recorded on a JASCO J-810 spectrophotometer (Jasco, Tokyo, Japan).
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