The largest database of trusted experimental protocols

3 protocols using bolt bis tris 4 12 polyacrylamide gels

1

Sorafenib Regulation of ERK and STAT3 Signaling

Check if the same lab product or an alternative is used in the 5 most similar protocols
The Abrams OSA cells (500,000/well in 6-well plate) were treated with either vehicle (0.1% DMSO) or sorafenib for 24 h. Cells were lysed with 250 μL of CelLytic M lysis buffer (C2978, Sigma-Aldrich, St. Louis, MO, USA), 2 μL of protease inhibitor (P8340, Sigma-Aldrich), and 2 μL of phosphatase cocktail inhibitor B (sc-45045, Santa Cruz, Dallas, TX, USA) according to manufacturer protocol. Protein concentrations were quantified with the QubitTM Protein Assay Kit. A total of 60 μg of protein per well was loaded on Bolt Bis-Tris 4–12% polyacrylamide gels (Thermo Fisher Scientific Inc.) and transferred to polyvinylidene difluoride membranes. The membranes were incubated with 5% bovine serum albumin (BSA) for 2 h at room temperature, then incubated with the following primary antibodies at 4 °C overnight to detect antigen: ERK (1:500), p-ERK (1:250), STAT3 (1:500), p-STAT3 (1:500), β-tubulin (1:4000) (Cell Signaling Technology). After three washes in tris-buffered saline with 0.05% Tween 20, the membranes were incubated with appropriate secondary antibody (donkey anti-mouse (1:15,000) or goat anti-rabbit (1:15,000)) for 1 h at room temperature. The membranes were visualized using the Odyssey Infrared Imaging System (LI-COR Biosciences, Lincoln, NE, USA) and analyzed using Image Studio™ Lite software (LI-COR, Lincoln, NE, USA).
+ Open protocol
+ Expand
2

Western Blot Analysis of PTEN and p16

Check if the same lab product or an alternative is used in the 5 most similar protocols
Western blot analysis was carried out as described before [5 (link)]. Briefly, the OSA cells and fibroblasts were lysed with CelLytic M lysis buffer (C2978, Sigma-Aldrich, St. Louis, MO, USA) in the presence of protease inhibitor (P8340, Sigma-Aldrich) and phosphatase cocktail inhibitor B (sc-45045, Santa Cruz Biotechnology, Dallas, TX, USA). Proteins were resolved on Bolt Bis-Tris 4–12% polyacrylamide gels (ThermoFisher Scientific, Waltham, MA, USA) and transferred to polyvinylidene difluoride membranes, incubated with 5% bovine serum albumin (BSA) for 2 h at room temperature, before being incubated with the primary antibodies at 4 °C overnight. The primary antibodies used were PTEN (Cell Signaling Technology, D 4.3, 1:2000), p16INK4A (Santa Cruz Biotechnology, F-8, 1:500) and β-actin (Cell Signaling Technology, 8H10D10, 1:2000. The secondary antibodies were obtained from (LI-COR Biosciences, donkey anti-mouse; goat anti-rabbit (LI-COR Biosciences), both used at a 1:15,000 dilution and incubated with the blot for 1 h at room temperature. The membranes were visualized using the Odyssey® M Imaging System (LI-COR Biosciences, Lincoln, NE, USA) and analyzed using Image Studio™ Lite software 5.2.5 (LI-COR Biosciences, Lincoln, NE, USA).
+ Open protocol
+ Expand
3

Western Blot Protein Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Equal volume of precipitated samples or equal concentration of protein from lysates were reduced and denatured using Bolt™ LDS Sample Buffer and dithiothreitol (Thermo Fisher). Samples were loaded into Bolt™ Bis-Tris 4–12% polyacrylamide gels (Thermo Fisher) and resolved by SDS-PAGE. Proteins were transferred to a nitrocellulose or PVDF membrane using the iBlot 2 System (Thermo Fisher), according to manufacturer's instructions. The membranes were blocked in 5% milk/Tris-Buffered Saline, 0.1% Tween-20 (TBST). Immunoblotting was performed using antibodies in Table S2. ImageJ was used to quantitate band intensities which were normalized to GAPDH or Lamin B1 loading controls. For phosphorylation quantitation, phosphorylated protein and total protein were normalized to loading control, followed by calculating the normalized phosphorylated protein/total protein ratio.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!