The largest database of trusted experimental protocols

34 protocols using anti mhcii

1

Flow Cytometry Analysis of Myeloid Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
LNs and spleen tissues were prepared using mechanical dissociation of minced tissue to obtain single cell suspensions. The following antibodies were used for flow cytometry: anti-Ly6G/Ly6C (Cat #58-5931-82), anti-Cd11b (Cat #12-0112-82), anti-CD86 (Cat #11-0862-82), anti-F4/80 (Cat #17-4801-82), anti-MHCII (Cat #13-5321-82), and anti-CD11c (Cat #11-0116-42) all from eBioscience, San Diego, CA) and anti-CD206 (clone MR5D3; BioRad). After being stained with a standard protocol, all events were analyzed with FlowJo software (FlowJo, LLC, Ashland, OR) and frequencies among live cells were obtained.
+ Open protocol
+ Expand
2

Immortalized DC Line Response to MSNs

Check if the same lab product or an alternative is used in the 5 most similar protocols
The immortalized immature DC line JAWS II was purchased from ATCC. JAWS II cells were seeded onto a cover slip (Paul Marienfeld GmbH & Co. KG, Lauda-Königshofen, Baden-Württemberg, Germany) and incubated with 250 μg/mL of rhodamine-preloaded MSNs for two days. Cells were fixed with 4% formaldehyde and permeabilized with 0.01% Triton X-100. Cells were stained with Alexa-Fluor488-conjugated phalloidin (Life Technologies, Eugene, OR, USA) and DAPI (Sigma-Aldrich, St. Louis, MO, USA). Fluorescence images were acquired using a Zeiss Observer D1 fluorescence microscope (Carl Zeiss, Oberkochen, Baden-Württemberg, Germany). The activation of JAWS II cells by CM-MSNs was determined by flow cytometry. JAWS II cells (5 × 106 cells) were seeded in 12-well plates and incubated with 100 or 200 μg/mL of CM-MSNs for two days. Cells were stained with anti-CD40 (BD562846), anti-CD80, anti-CD86, anti-MHC I (BD742859), anti-MHC II and anti-PD-L1 (12-5982-82, eBioscience, San Diego, CA, USA). Stained cells were analyzed by a BD FACSVerse flow cytometry.
+ Open protocol
+ Expand
3

Whole Blood and Spleen Cell Isolation and Staining

Check if the same lab product or an alternative is used in the 5 most similar protocols
Peripheral blood (50 μL) was collected and placed in 4 ml of mouse RBC lysis buffer (eBioscience). Splenic single-cell suspensions were prepared by mechanical dissociation of the spleen, followed by filtration, and lysis of the RBCs. Cells were stained with anti-mouse CD4, CD8α, CD19, CD3e, NK1.1, λσ-T, FoxP3, and granzyme B antibodies (eBiosciences). For granzyme B measurements, T cell activation was performed before Ab staining. Splenic single-cell suspensions were prepared and cultured in RPMI 1640 (containing 10% FBS) plus IL-2. T cells were activated for 7 days using a Dynabead Mouse T Activator CD3/CD28 kit. Antibodies used for flow cytometry in this study (anti-CD11c, anti-CD11b, anti-CD19, anti-NK1.1, anti-CD3, and anti-MHCII) were from eBioscience, and anti-TNF-α was from Becton-Dickinson. Single-cell suspensions were prepared with a Neural Tissue Dissociation Kit from Miltenyi Biotec. For CD11b and TNF-α analysis, cells were treated with Cell Stimulation Cocktail and a protein transport inhibitor (eBioscience) overnight, stained for surface CD11b, and fixed and permeabilized for TNF-α detection (using flow cytometry). TMEM 119 was used to stain microglia via ex vivo flow cytometry and by immunohistochemistry (34 (link)).
+ Open protocol
+ Expand
4

Isolation and Immunophenotyping of Tumor Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Tumor tissues were minced and incubated with collagenase type II (1 mg/ml, Thermo Fisher) at 37°C for 40 min to obtain a single-cell suspension. For the staining of extracellular target proteins, 1 × 106 cells were first incubated in a mixture of PBS, 1% FBS, and anti-CD16/32 antibody (BioLegend, #101301) to block non-specific binding and then labeled with the indicated antibodies at room temperature for 30 min. Fluorescence-activated cell sorting (FACS) was performed using a Beckman Coulter Gallios flow cytometer (USA), and the results were analyzed using FlowJo software version 10.0.7 (TreeStar). The following fluorochrome-coupled antibodies were used in the experiment: anti-CD45 (#103115), anti-CD206 (#141711), anti-CD3 (#100235), anti-CD4 (#100203), anti-CD8 (#100733), anti-NK1.1 (#108709), and anti-Gr1 (#108425) (all from BioLegend); and anti-CD11b (#12-0112), anti-F4/80 (#11-4801), anti-CD11c (25–0114), anti-MHCII (#17-5321), and anti-CD86 (#17-0862) (all from eBioscience) antibodies; the fixable viability dye eFluor 506 was from eBioscience (#65-0866).
+ Open protocol
+ Expand
5

Surface Marker Expression Analysis of MSCs and DCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
Expression of CD90, CD105, CD45, and CD11b/c (eBioscience, USA) on MSCs surface was assessed by flow cytometry (Becton Dickinson, USA). The expression of CD11b/c, CD80, CD83, CD86, and MHC II (eBioscience, USA) on DCs surface was identified using flow cytometry. Each group of DCs were collected on the sixth day. After washing with PBS, the cells were immunolabeled with monoclonal anti-CD80, anti-CD83, anti-CD86, and anti-MHC II (eBioscience, USA) antibodies, as well as their isotype control antibodies. After that they were incubated in darkness at 4°C for 30 min and were detected using FACSCalibur flow cytometer.
+ Open protocol
+ Expand
6

Comprehensive DC Activation and T-cell Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immature DCs (107) were stimulated for 6 h with LPS (1 µg/ml E. coli strain O111:B4, Calbiotech Merck) or LPS in combination with IFN-γ (0.02 µg/ml, BD Pharmingen) with or without Dex (10−8 M, Sigma-Aldrich) for 20 min before adding other reagents. To monitor maturation, DCs (105) were stained with 5 µl of mix including anti-MHC-I, anti-MHC-II, anti-CD11b, anti-CD11c, anti-CD80, anti-CD83 and anti-CD86 (all from eBioscience, Austria).
T-cells were stained with anti-CD3, anti-CD4, anti-CD8, anti-CD25 and anti-Vα2 TCR for OT-I and OT-II mice (eBioscience). Cell viability was analysed with DAPI (Sigma-Aldrich). Apoptosis was measured with Annexin V (BD Pharmingen). CFSE (7 µM, Invitrogen) or Cell Proliferation Dye eFluor 670 (CPD, 5 µM, eBioscience) were used to detect proliferation. Flow cytometry was done on an LSR II (BD Pharmingen). Data were analysed by FlowJo (Version 9.6.2 Treestar). The difference in apoptosis induction was calculated using absolute cell number, determined with BD Trucount tubes.
This method is based on lyophilized pellet, containing a known number of fluorescent beads, which dissolves once the monoclonal antibody reagent is added. Absolute numbers (cells/µl) of positive cells in the sample are calculated following the equation: number of cell events/number of bead events x Trucount bead concentration.
+ Open protocol
+ Expand
7

Multiparametric Flow Cytometry of Lymphocytes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells suspended in PBS supplemented with 0.5% w/v bovine albumin serum (BSA) and 2 mM EDTA were stained with combinations of the following antibodies: anti-CD19 (BD Biosciences, BV421), anti-GL7 (eBioscience, Alexa488), anti-Fas (CD95) (eBioscience, APC), anti-B220 (CD45R) (BioLegend, BV711 & APC, BD Biosciences, BUV496), anti-CD38 (BD Biosciences, BUV395), anti-CXCR4 (eBioscience, PE/Cy7), anti-CD86 (BD Biosciences, BV421, eBiosciences, FITC), anti-IgG1 (eBioscience, PE/Cy7), anti-CD69 (BioLegend, APC), anti-IgM (BD Biosciences, BV711), and anti-MHCII (eBioscience, PE/Cy5). Typically, 0.06–1 μg of antibody was used for staining of approximately 105–107 cells in 100 μL. All samples were analyzed using a BD Accuri C6 or BD LSRFortessa (BD Biosciences, Franklin Lakes, NJ, USA). The data were analyzed using FlowJo software.
+ Open protocol
+ Expand
8

Phenotypic Characterization of Uterine Dendritic Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols

Single cells prepared from the uterus were treated
with antibody against CD16/CD32 (anti-Fcγ receptor
III/ II antibody) to avoid non-specific antibody binding
through Fc receptors blockage. Cells were then washed
twice with ice-cold PBS (pH=7.2) and stained with PEconjugated
hamster anti-mouse CD11c and one of the
APC-conjugated monoclonal antibodies (anti-MHCII,
anti-CD86, anti-CD11b, and anti-CD40) and APCCy7-
conjugated antibody (anti-CD45) (all antibodies
obtained from eBioscience, San Diego, USA). Cells were
subsequently analyzed by flow cytometry (FACSCanto
II, BD, San Jose, CA, USA) and the obtained data were
analyzed using the FlowJo software (version 6.07). The
uterine cells were selected on dot plots of side and forward
scatters. CD45-positive cells as uterine leukocytes were
gated and the frequency of CD11c-positive cells (mouse
uDCs) was evaluated in uterine leukocyte population
(Fig .1). The expression of the DC lineage marker (CD11b)
and co-stimulatory molecules (CD40, CD86, and MHCII)
were assessed on CD11c+ cells.
+ Open protocol
+ Expand
9

Multicolor Flow Cytometry Immune Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following fluorochrome-conjugated anti-mouse monoclonal antibodies for cell surface markers and intranuclear factor were purchased from eBiosciences (San Diego, California, USA): fluorescein isothiocyanate-conjugated anti-CD4 (cat no. 11-0041-85), anti-Gr-1 (cat no. 11-5931-82), anti-MHC-II (cat no. 11-5321-82); phycoerythrin-conjugated anti-CD45 (cat no. 12-0451-83), anti-CD25 (cat no. 12-0251-83); phycoerythrin cyanine7-conjugated anti-CD8 (cat no. 25-0081-82), anti-F4/80 (cat no. 25-4801-82); allophycocyanin (APC)-conjugated anti-CD11b (cat no. 17-0112-82), and anti-Foxp3 (cat no. 17-5773-82). Single-cell suspensions of splenocytes, tumor-infiltrating lymphocytes, and ascitic cells were stained on ice for 30 min with the indicated cell surface marker antibodies (dilution, 1: 200). For intranuclear Foxp3 staining, cells were fixed and permeabilized using a Cytofix/Cytoperm Kit (cat no. 00-5523-00; eBiosciences) on ice for 30 min after labeling with surface marker antibodies, followed by anti-Foxp3 mAb (dilution, 1: 50) intranuclear staining on ice for 30 min. Samples were acquired on a BD FACScanto II flow cytometer (BD Biosciences, San Jose, California, USA) and the results were analyzed using Flowjo software (TreeStar, Ashland, Oregon, USA).
+ Open protocol
+ Expand
10

Multiparameter Flow Cytometry of Immune Cell Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
Eight-color flow cytometry was conducted using total mononuclear cell preparations and was run on the MACSQuant Analyzer (Miltenyi, Auburn, CA). Antibodies purchased from eBioscience are as follows: anti-CD11b (M1/70); anti-CD18 (M18/2); anti-Ly-6G (RB6-8C5); anti-CD22 (2D6); anti-CD69 (H1.2F3); anti-MHC II (M5/114.15.2); anti-TCRβ (H57-597); anti-CD44 (IM7); anti-CD14 (Sa2-8); anti-CD45 (30-F11); anti-CD62L (MEL-14); anti-CD209 (5H10); anti-CD20 (2H7); anti-IFNγ (XMG1.2); anti-TNF-α (MP6-XT22); anti-FoxP3 (FJK-16s); and anti-IL-6 (MP5-20F3). Anti-CD8a-VioBlue was purchased from Miltenyi Biotech. Antibodies made in-house include: anti-CD4 (GK1.5); anti-CD40 (1C10); anti-CD25 (PC61.5.3); anti-CD5 (53-7.313); and anti-CD3 (145-2C11). Single cell suspensions were incubated on ice with appropriate antibodies for 30 min. Cells were washed with running buffer 3 times fixed in 1% paraformaldehyde/PBS, and then suspended in running buffer for flow cytometry. Results were analyzed with FlowJo software.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!