The largest database of trusted experimental protocols

7 protocols using hla dr g46 6

1

Multiparameter Flow Cytometry Panel

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cell suspensions were incubated with LIVE/DEAD Fixable Aqua Dead Cell Stain Kit (Life Technologies). Fc receptors were blocked using FcR block (Miltenyi) followed by staining with antibodies against surface molecules CD1c (AD5‐8E7; Miltenyi), CD3 (SP34‐2 and SK7; BD), CD11c (B‐Ly6; BD), CD14 (M5E2; BD), CD16 (3G8; Biolegend), CD19 (HIB19; Biolegend), CD20 (L27; BD), CD45 (HI30; Biolegend), CD56 (HCD56; Biolegend), CD66abce (TET2; Miltenyi), CD80 (2D10; Biolegend), CD123 (7G3; BD), CD141 (AD5‐14H12; Miltenyi), CCR7 (G043H7; Biolegend), and HLA‐DR (G46‐6; BD) for 15 min at 4°C in PBS with 2% FCS and fixed with 1% paraformaldehyde. Cells were analyzed using an LSRII flow cytometer (BD) and data were analyzed using FlowJo X software (Tree Star).
+ Open protocol
+ Expand
2

Phenotyping Immune Cells in Simian Immunodeficiency Virus

Check if the same lab product or an alternative is used in the 5 most similar protocols
Mononuclear cells from spleen of SIV-naïve RM were stained with primary antibody staining which included: CD3 (clone SP34.2; manufacturer BD Pharmingen), CD14 (M5E2; BD Pharmingen), CD20 (2H7; BioLegend), HLA-DR (G46-6; BD Pharmingen), and NKG2A (Z199; Beckman Coulter). After incubation for 20 minutes at room temperature, the cells were washed with wash buffer (1XPBS containing 2% FBS) and stained with DAPI dye (ThermoScientific) for live and dead cell discrimination. After 5 minutes of incubation, cells were washed and fixed with 1% formaldehyde. Samples were recorded using an ImageStreamX Mk II (EMD Millipore) and analyzed using IDEAS Application v6. The general analysis, colocalization and internalization modules in the IDEAS software were utilized in analyzing these samples.
+ Open protocol
+ Expand
3

Multicolor Flow Cytometry Panel

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fluorophore-conjugated anti-human CD3 (UCHT1), CD4 (SK3), CD8 (RPA-T8), CD14 (MφP9), CD25 (M-A251), CD33 (WM53), CD127 (HIL-7R-M21) and HLA-DR (G46-6) antibodies were purchased from BD Biosciences. CD15 (HI98, BD Bioscience) was conjugated with PerCP using the Expedeon Lightning-Link kit. Anti-human CD11b (CD11B29) antibody and LIVE/DEAD Fixable Blue Dead Cell Stain Kit for UV excitation were obtained from ThermoFisher Scientific.
+ Open protocol
+ Expand
4

Immune Cell Profiling in Pediatric ASD

Check if the same lab product or an alternative is used in the 5 most similar protocols
To validate the most significant immune cells in children, the whole blood samples from 30 children with ASD and 30 age and sex-matched TD children were collected at the 3rd Affiliated Hospital of Zhengzhou University. All participants provided informed consent to participate in the study, which was approved by the Medical Ethics Committee of the 3rd Affiliated Hospital of Zhengzhou University (Ethical number 2020–56). All blood samples were processed within 8 h for flow cytometry with a mix of antibodies according to the manufacturer’s instructions. The antibodies purchased from BD Biosciences included CD45 (HI30, Cat# 564105) CD14 (M5E2, Cat# 561712), CD16 (3G8, Cat# 563692), and HLA-DR (G46-6, Cat# 560896). The data were analyzed using FlowJo software (TreeStar) and presented using the UMAP method.
+ Open protocol
+ Expand
5

Immunophenotyping of PBMC in Ipilimumab Trial

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blood was collected at four time points: baseline (week 1) prior to administration of ipilimumab, prior to third cycle of ipilimumab (week 7), after completion of ipilimumab (week 12), and at disease progression or week 24. Blood was obtained by venipuncture and collected in acid-citrate-dextrose tubes (BD Vacutainer). Peripheral blood mononuclear cells (PBMC) were isolated by Ficoll density gradient centrifugation (GE Healthcare), resuspended in a 90% FBS (Gemini) and 10% DMSO (Sigma-Aldrich) solution, and cryopreserved in vapor phase liquid nitrogen until batch testing.
Cellular analysis of immune cell subsets in isolated PBMCs was performed by polychromatic flow cytometry. For cell staining, thawed cells were first incubated with a Zombie viability dye (BioLegend) to detect dying cells, followed by a surface stain procedure with an antibody cocktail consisting of anti-CD3 (SK7; BD), CD4 (SK3; BioLegend), CD8 (SK1; BD), PD-1 (EH12.2H7; BioLegend), TIM-3 (7D3; BD), HLA-DR (G46–6; BD), CD56 (HCD56; BioLegend), CD19 (HIB19; BioLegend), CD16 (3G8; BD), CD11b (M1/70; BD), CD14 (M5E2; BD), and CD33 (P67.6; BioLegend). The unbound antibodies were washed out by centrifugation and stained cells were fixed with 1% paraformaldehyde prior to acquisition on an LSR Fortessa flow cytometer (BD Biosciences), and data were analyzed using Flowjo software (BD Biosciences).
+ Open protocol
+ Expand
6

Generation of Monocyte-Derived Dendritic Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
All experiments were performed after the approval of the institutional Committee for Ethics in Research (Fundação Pró-Sangue, CEP#03, FMUSP). Healthy donors’ peripheral blood was obtained from leukoreduction chambers (41 (link)) after signed written informed consents. PBMCs were isolated by density gradient centrifugation over Ficoll-Paque (GE Healthcare, Uppsala, Sweden). For the generation of monocyte-derived DCs, PBMCs were either plated for 2 h for adherence of monocytes to the plastic and subsequent removal of non-adherent cells (42 (link)) or by positive magnetic selection (Milteny Biotec, Bergisch Gladbach, Germany) for the isolation of CD14+ monocytes. The monocytes were cultured at 37°C and 5% CO2 in RPMI-1640 medium supplemented with 10% FBS, antibiotic-antimycotic (Thermo Fisher Scientific) and 50 ng/ml of IL-4 plus 50 ng/ml of GM-CSF (both from PeproTech, Rocky Hill, NJ, USA) for 5 days to obtain immature monocyte-derived dendritic cells (iDCs) (43 (link)). At day 5, iDCs cells were harvested, washed, counted, and activated for 24 h with previously transduced SK-MEL-147 cells at a 1:1 and 1:10 ratios. Cells were harvested and analyzed by flow cytometry using CD209 (DCN46, #551545, BD), HLA-DR (G46-6, #556643, BD), CD80 (L307.4, #340294, BD), CD83 (HB15e, #561132, BD), CD86 (2331, #561124, BD) or used for the priming of autologous T cells.
+ Open protocol
+ Expand
7

Detailed Immunophenotyping of T-cell Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used: CD80 (L307.4; BD Biosciences), CD86 (FUN-1; BD Biosciences), CD86 (IT2.2, BioLegend), CD25 (BC96; eBioscience), FoxP3 (236A/E7; eBioscience), CTLA-4 (BNI3; BD Biosciences), IFN-γ (B27; BD Biosciences), CD3 (UCHT1; BD Biosciences), CD4 (SK3; BD Biosciences), CD45RA (HI100; eBioscience), CD38 (HIT2; BD Biosciences) and HLA-DR (G46-6; BD Biosciences). For surface marker staining, cells were washed and re-suspended in 50 µl of FACS buffer (PBS and 2% Goat serum) containing antibodies conjugated with fluorochromes. Reactions were incubated for 30 min on ice. Cycling CTLA-4 was stained for 30 min at 37°C. For intracellular staining of FoxP3, a FoxP3 staining kit (eBioscences) was used according to the manufacturer’s instructions. Flow cytometry data were analysed by FlowJo (TreeStar, Ashland, Oregon, USA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!