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12 protocols using hyaluronidase type 1

1

Isolation of CD45+ Cells from Tissue

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Samples were washed with calcium-free and magnesium-free phosphate-buffered saline and then separated into thin layers and cut into small pieces on ice. The tissues were then digested using an enzyme cocktail, which consisted of 3 mg/ml collagenase type I (Sigma–Aldrich), 0.156 mg/ml collagenase type XI (Sigma–Aldrich), 0.25 mg/ml soybean trypsin inhibitor (Worthington), 0.1875 mg/ml lyophilized elastase (Worthington), 0.24 mg/ml hyaluronidase type I (Sigma–Aldrich) and 60 U/ml DNase I (Sigma–Aldrich) (6 (link), 13 (link)). Tissues were digested in a 37°C water bath for 30 min, the supernatants were collected, with Dulbecco's modified Eagle's medium (DMEM) and 10% fetal bovine serum added to stop the reaction. Fresh enzyme cocktail was then added to the digested tissues for a second round of digestion. The digestion process was repeated 3–4 times. Then, the erythrocytes were removed via ACK lysis buffer (Lonza) treatment for 5 min. The CD45+ cells were then purified using a magnetic cell sorting system (Miltenyi Biotec) according to the manufacturer's instructions. Following centrifugation (300 g, 4°C, and 5 min), the cell pellet was collected. Finally, 10 μl of suspension was counted under an inverted microscope using a hemocytometer. Trypan blue was used to quantify live cells.
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2

Xenograft Tumor Dissociation and Immune Cell Isolation

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Fresh xenograft tumours were soaked in PBS and chopped to 1 mm3 size with surgical blade. After washed with PBS, the slices were digested with collagenase (type IV, 1.5 mg/ml, Sigma) and hyaluronidase (type I, 0.25 mg/ml, Sigma) DMEM culture medium by rotating at 37 °C for 2 h. Digested cells were filtered through a sterilised cell strainer (70 µm) and collected by centrifugation at 800 rpm/min for 5 min. After washed in 25 ml PBS, the isolated cells were either cultured for ~48-h for the second round of xenograft growth or resuspended in 5 ml RBC lysis buffer for 10 min. After washed in PBS, the cells were then aliquoted in 106 cells/100 µl culture medium for flow cytometry analysis of F4/80+ and CD206+ expressions.
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3

Isolation of Vascular Smooth Muscle Cells

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The in vitro analyses of VSMCs were performed with isolated VSMCs obtained from the aorta of global CRP4−/− and CRP4+/+ mice from both sexes at the age of 6–8 weeks. After euthanasia by CO2 inhalation, the aorta was isolated and cleaned from adventitial tissue. VSMC cultures were established from four aorta per genotype, which were pooled for the enzymatic dissociation as described previously [44 (link)]. In brief, aorta were cut into ~1 mm segments and digested by Papain (0.7 mg/mL from Sigma Aldrich) for 1 h at 37 °C following by Hyaluronidase Type I (1 mg/mL) with Collagenase Type II (1 mg/mL) (both from Sigma Aldrich) for 25 min at 37 °C. Digestion was stopped with VSMC culture media (10% FBS, 5% Penicillin in DMEM Glutamax® from Thermo Fisher Scientific), and the cells were centrifuged for 7 min at 300× g. Sedimented cells were resuspended in 1 mL VSMC culture media, counted using a Neubauer haemocytometer (Merck Millipore) and seeded in 6-well plates (Corning GmbH, Kaiserslautern, Germany) at a density of 5× 104 cells/mL. The medium was changed every third day until the experiments with primary VSMCs or highly passaged cells (P10-15) were performed. For analyses of primary and passaged VSMC, results were obtained from multiple (at least three) independent isolates of each genotype.
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4

Cytokine Production in Mononuclear Cells

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Mononuclear cells (MNCs) were prepared from 4 groups of mice to determine cytokine production according to our previous reports [17 (link)–19 ]. Mediastinal lymph nodes (MLNs) tissues and spleen were removed from the mice. The removed tissues were chopped by sterile scissors, and digested in a 37°C water bath for 2 hours in digestion buffer containing 1.5 mg/mL collagenase A (type IA, Boehringer Mannheim, Mannheim, Germany), 0.02 mg/mL DNase I (type I, Boehringer Mannheim), and 0.75 mg/mL hyaluronidase (type I, Sigma). After the digestion procedure, the cell pellets were filtered using a metal mesh. Then, filtered digestives were washed 3 times by RPMI 1640 (Gibco BRL, Rockville, MD) containing 10% fetal bovine serum (FBS, Gibco BRL) and 1% penicillin/streptomycin (PC/SM, Gibco BRL), followed by the density gradient method to purify the MNCs. These MNCs were cultured at a density of 1×106/200 μL/well in 96-well plate in an incubator under a 95%O2–5%CO2 gas mixture, at 37°C for 48 hours. Two forms of stimulation were used to culture: no stimulation (none) and 100 μg/mL of Df allergen (Df). The concentrations of IFN-γ, IL-2, IL-4, IL-5, and IL-13 in the culture supernatants were determined by ELISA (Quantikine, R&D Systems Inc., Minneapolis, MN), using the procedures described in the respective instruction manuals.
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5

Splenic and Aortic Cell Analysis in Atherosclerosis

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Splenic mononuclear cells of Ldlr−/− or DK mice were treated with or without 1 μM trans-4- {4-[3-(4-trifluoromethoxyphenyl)-ureido] cyclohexyloxy} benzoic acid (t-TUCB), an sEH inhibitor, and 1 μM 14,15-EET (Cayman Chemical; Ann Arbor, MI) for 12 h. After washing, 1×106 cells were stained for 30 min on ice with anti-mouse PE anti-mouse PSGL-1 (BD Pharmingen, San Jose, CA). Harvested aortas from Ldlr−/− and DK mice fed with WTD were microdissected and digested with 125 U/ml collagenase type XI, 60 U/ml hyaluronidase type I, 60 U/ml DNase1, and 450 U/ml collagenase type I (all enzymes were obtained from Sigma-Aldrich) in PBS containing 20 mM HEPES at 37°C for 1 h. A cell suspension was obtained by mashing the aorta through a 70-μm strainer. Cells were incubated with FITC-CD45, anti-mouse PE-CD11b and anti-mouse APC-Ly6C (Biolegend, San Diego, CA) for 20 min at 4°C, washed twice, and incubated with secondary Abs for an additional 20 min. Flow cytometry was involved in the use of FACS Calibur (Becton Dickinson, San Jose, CA) and data were analyzed by use of FlowJo (Tree Star, Ashland, OR).
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6

Isolation of Lacrimal Gland Epithelial Cells

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Lacrimal glands were minced in Dulbecco’s modified Eagle medium (DMEM) containing 10% fetal bovine serum (FBS) and 100 U/ml Penicillin Streptomycin (Pen Strep, Thermo Fisher Scientific), and digested at 37°C for 40 min with 1 mg/ml collagenase type I (Wako), 1 mg/ml hyaluronidase type I (Sigma), 0.01 mg/ml DNAse I (Roche), and 100 U/ml Pen Strep in DMEM. After being digested, they were filtered through a 70-μm nylon mesh, centrifuged, and rinsed twice with DMEM containing 10% FBS. Epithelial cells from the cell suspension were collected by positive selection using Miltenyi mouse CD326 (EpCAM) MicroBeads. We confirmed that purity was more than 80% (Supplementary Figure 5).
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7

Isolation of Skin-Derived Immune Cells

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Isolation of immune cells from the skin was performed as previously
described (94 (link))(29 (link)). Briefly, mouse skin was excised, trimmed of
subcutaneous fat, minced, and digested with a cocktail of collagenases type I
and IV (Worthington, Lakewood, NJ) and hyaluronidase type I (Sigma-Aldrich, St.
Louis, MO) to generate a single cell suspension. Mononuclear cells were enriched
from the cell preparations using a Percoll gradient (40%/80%) centrifugation and
used for cell analysis. For surface molecule staining, cells were incubated with
fluorescently labeled antibodies in a staining buffer for 25 min at 4°C
and, if necessary, with secondary antibodies for 15 min at 4°C. For
intracellular molecular staining of cytokines and granzyme C, cells were
stimulated with PMA (1 μg/mL) and ionomycin (2 μg/mL) (Millipore
Sigma) for 3 hours in presence of brefeldin A (1 μg/mL) and then stained
first for extracellular proteins. The cells were then fixed with 4%
paraformaldehyde, permeabilized with a permeabilization buffer (eBioscience),
and stained with antibodies to the intracellular proteins. Flow cytometric
analyses were performed on FC500 (Beckman Coulter) or BD Fortessa LSRII (BD
Biosciences). Data were analyzed with FlowJo software (FlowJo LLC., Ashland,
OR).
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8

Epithelial Cell Isolation from Mouse Tissues

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Tissues were minced and homogenized as described above and digested with 1 mg/mL collagenase type I (Wako), 1 mg/mL hyaluronidase type I (Sigma), and 0.01 mg/mL DNase I (Roche) in DMEM containing 10% FBS at 37 °C for 40 min. They were then filtered through a 70-μm nylon mesh, centrifuged (600× g, 4 °C, 5 min), rinsed twice with DMEM containing 10% FBS, and filtered through a 40-μm nylon mesh. Epithelial cells from the cell suspension were collected by positive selection using Miltenyi mouse CD326 (epithelial cell adhesion molecule; EpCAM) MicroBeads (130-105-958) [56 (link)]. We confirmed that purity was more than 80% (Figure S7). Total RNA was extracted as described above.
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9

Isolation of Murine Vascular Smooth Muscle Cells

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VSMC cultures were established from male and female mice euthanized by CO2-inhalation at 6–8 weeks. The aorta was dissected and cleaned from adventitial tissue. Next, aortic vessels from ~4 individuals per genotype were pooled and cut into pieces (~1 mm) prior to a first enzymatic digestion step (Papain (0.7 mg/mL) from Sigma Aldrich (Schnelldorf, Germany) for 1 h at 37 °C. Following the second enzymatic digestion (Hyaluronidase Type 1 (1 mg/mL) and Collagenase Type 2 (1 mg/mL), both from Sigma Aldrich (Schnelldorf, Germany), under sterile conditions for 25 min at 37 °C. The isolated cells were then centrifuged (300×g for 7 min) and resuspended in DMEM Glutamax cell culture medium containing 5% PenStrep and 10% FCS. VSMC cultures were maintained in sterile incubators at 37 °C and 6% CO2 and received fresh medium every third day. After approximately 7 days, when cells grew to 80% confluency, subsequent in vitro experiments were performed.
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10

Isolating Aortic Cells from Mice

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Mice were sacrificed after feeding HCD for 4 months and cleared of blood by flushing the system with 30 ml of 1× DPBS. The aorta was then dissected out and cut into 1-2 mm pieces and digested with a mixture of 125U/ml Collagenase XI (Sigma), 450 U/ml Collagenase type 1 (Sigma), 60 U/ml Hyaluronidase type 1 (Sigma), and 60 U/ml DNase I (Roche) in a DPBS/20mM Hepes buffer, pH7.2 (19 (link)). The tube was mixed and placed into a 42ºC water bath for 1 hour and mixed every 10 min. Following digestion, the mixture was passed through a 70 μm cell strainer (Falcon), and then centrifuged at 850×g for 2 min. After centrifugation the cells were fixed in 1% PFA for 10 min at room temperature, washed, and resuspended with 1× DPBS. The cells were then incubated with the same blocking agents, antibodies, and isotype control antibodies for 30min at room temperature prior to flow cytometry analysis. The same antibodies and procedures in the leukocyte/platelet aggregation assay were used to identify CD45, CD11c and CD41.
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