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Validated specific primers

Manufactured by Qiagen
Sourced in Germany

Validated specific primers are DNA sequences designed to target and amplify specific regions of genetic material. They are used in various molecular biology applications, such as real-time PCR, to detect and quantify specific genes or sequences of interest.

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2 protocols using validated specific primers

1

RNA Extraction and Quantitative PCR Analysis

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Total RNA from the K562 cell line was extracted using an Aurum Total RNAMini Kit (Bio-Rad, Hercules, CA, USA) according to the manufacturer’s protocol. 0.5 mg of total RNA was then reverse-transcribed to generate cDNA for PCR by using the iScript cDNA Synthesis kit (Bio-Rad, Hercules, CA, USA). Semi-quantitative determination of mRNA levels was performed by real-time qRT-PCR using SYBR Green (Bio-Rad, Hercules, CA, USA). Reactions were performed in duplicate for each sample. Multiple reactions were performed in a volume of 20 μL containing 10 μL of 2 × PCR master mix, 1X of validated specific primers (Qiagen, Hilden, Germany) (see Table 1), and 2 μL of cDNA template. Amplifications were performed in the Stratagene MX3000P Real-Time PCR Detection System (Stratagene, San Diego, CA, USA), using the following cycle program: denaturation step at 95 °C for 10 min followed by 40 cycles of denaturation at 95 °C for 15 s, annealing at 55 °C for 1 min, and extension at 72 °C for 30 s. The relative mRNA expression levels were calculated using the comparative CT method (2-ΔΔCT). Quantitative normalization for each sample was performed by using glyceraldehyde-3-phosphate dehydrogenase (GAPDH, Qiagen, Hilden, Germany) as an internal control.
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2

Quantitative RNA Expression Analysis in Fibroblasts

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The purification of total RNA from fibroblasts was carried out by using Aurum Total RNAMini Kit (Bio-Rad, Hercules, California, USA) according to the manufacturer’s protocol. 0.5 microgram of total RNA was then reverse-transcribed to generate cDNA for PCR by using the iScript cDNA Synthesis kit (Bio-Rad, Hercules, California, USA). Semi-quantitative determination of mRNA levels were performed by real-time qRT-PCR, using SYBR Green (Bio-Rad, Hercules, California, USA). Reactions were performed in duplicate for each sample. Multiple reactions were performed in a volume of 20 μL containing 10 μL of 2× PCR master mix, 1× of validated specific primers (Qiagen, Venlo, The Netherlands), and 2 μL of cDNA template. Amplifications were performed in the Stratagene MX3000P Real-Time PCR Detection System (Stratagene, San Diego, CA, USA), using the following cycle program: denaturation step at 95 °C for 10 min followed by 40 cycles of denaturation at 95 °C for 15 s, annealing at 55 °C for 1 min, and extension at 72 °C for 30 s. The relative mRNA expression levels were calculated by using the comparative CT method (ΔΔCT). Quantitative normalization for each sample was performed by using glyceraldehyde-3-phosphate dehydrogenase (GAPDH) as an internal control. Validated primers (Qiagen, Venlo, The Netherlands) for qRT-PCR are provided in Table S1.
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