The largest database of trusted experimental protocols

32 protocols using glass coverslip

1

Locust Primary Brain Cell Culture

Check if the same lab product or an alternative is used in the 5 most similar protocols
Locust primary brain cell cultures were established from 4th stage juvenile locusts as previously described (Ostrowski et al., 2011 (link); Miljus et al., 2014 (link)). Complete growth medium consisted of L15 (Leibovitz’s L-15 Medium, #11415049, Thermo Fisher Scientific, Germany), 5% FBSG (Fetal Bovine Serum Gold, PAA Laboratories GmbH, Austria), 1x Penicillin-Streptomycin (Penicillin-Streptomycin, 10,000 units penicillin and 10 mg streptomycin/ml, #P4333, Sigma-Aldrich®, Germany) and 1% Amphotericin B (GibcoTM Amphotericin B, 250 μg/ml, #15290018, Thermo Fisher Scientific, Germany). Dissected brains were pooled (see below), enzymatically digested with 2 mg/ml Collagenase/Dispase solution for 30–45 min at 27°C and mechanically dissociated by trituration with a 100 μl tip of an Eppendorf pipette. The primary brain cells were cultured on ConcanavalinA-coated (Sigma-Aldrich®, Germany) round glass cover slips (Ø 10mm, Corning, Inc., Sigma-Aldrich®, Germany) in 4-well NUNC plates (#176740, NuncTM Delta Surface, Thermo Fisher Scientific, Germany) filled with 500 μl of complete growth medium at 27°C in a humidified atmosphere. The medium was changed every 2 days. Based on previous studies (Gocht et al., 2009 (link)), locust brain cultures are estimated to contain approximately 3% glia and 97% neurons after 7 days in vitro under normoxic conditions.
+ Open protocol
+ Expand
2

Microscope Slide and Coverslip Preparation

Check if the same lab product or an alternative is used in the 5 most similar protocols
We purchased glass coverslips (Corning, 22
mm × 22 mm) and premium plain glass microscope slides (75 mm
× 25 mm) from Thermo Fisher Scientific (Waltham, MA).
+ Open protocol
+ Expand
3

Immunofluorescence Staining of Fibroblasts

Check if the same lab product or an alternative is used in the 5 most similar protocols
Fibroblasts were plated in 6-well plates containing glass coverslips (Corning, New York, NY, USA) at a cell density of 75,000 cells/well for 24 h. Then, cells were fixed using 4% paraformaldehyde for 20 min and permeabilized with 0.2% Triton X-100/1× PBS for 10 min. After blocking with 3% BSA/1× PBS for 1 h, the cells were incubated with specific primary antibodies (Table 1) in 3% BSA/1× PBS for 2 h at room temperature, followed by incubation with the appropriate secondary antibody (Table 1) in 3% BSA/1× PBS for 1 h in the dark. The coverslips were mounted on a microscope slide using Vectashield® mounting medium with 4′,6-diamidino-2-phenolyde (DAPI) (Vector Laboratories, Burlingame, CA, USA) [27 (link),74 (link)]. Image acquisition was performed using an epifluorescence microscopy Zeiss AxioImager Z1 (Zeiss, Jena, Germany) motorized microscope equipped with a Plan-ApoCHROMAT 63×/1.4 oil objective lens. Microphotograph images were taken with a digital AxioCam HR3 (soft imaging system).
+ Open protocol
+ Expand
4

Fabrication of Microfluidic Devices for Microalgae

Check if the same lab product or an alternative is used in the 5 most similar protocols
The devices were fabricated by first creating a multi-layer master-mold using photolithography. Negative photoresists (Microchem Corporation) were used to create the master-mold according to established methods (18 (link)). Specifically, SU-8 2001.5 was spun at 2700 rpm to generate a 1.25 µm trap layer for Synechocystis. SU-8 2000.5 was spun at 565 rpm to generate a 0.74 µm trap layer for S. elongatus. SU-8 2003 was spun at 1600 rpm to generate a 3.25 µm trap layer for C. sorokiniana. The other layers for all three devices were the same. SU-8 2005 was spun at 660 rpm and 1200 rpm to generate the main channel and chaotic mixers, respectively. The devices were then made by pouring and curing polydimethyl-siloxane (PDMS) onto the master-mold. PDMS was prepared by mixing Sylgard 184 Elastomer curing agent and base (DOW Corning) in 1:10 ratio. PDMS was poured onto the master-mold, degassesd for 30 min, cured for 1 hour at 80 degrees C, and then carefully peeled off the mold. Holes for the five ports were punched using a 0.5 mm Harris Uni-Core hole puncher (Ted Pella, Inc) and the devices were subsequently bonded to glass coverslips (Corning) via oxygen plasma exposure (Jelight UVO cleaner Model no. 42, 0.6 scfm O2, 3 min).
+ Open protocol
+ Expand
5

Proximity Ligation Assay for MUL1-AKT Interaction

Check if the same lab product or an alternative is used in the 5 most similar protocols
SCC15 or SCC-QLL1 human HNC cells were attached on glass cover slips (Corning, Lowell, MA) at 70% confluence and cultured overnight. On the next day, cells were washed with PBS, treated with NTP, and cultured for an additional 24 hours in the absence of serum. The cells were fixed in 4% paraformaldehyde for 15 min, permeablized with 0.1% Triton X-100, and incubated with 5% BSA for 1 hour at room temperature. Cells were incubated with rabbit anti-MUL1 (1:200) and mouse anti-pan-AKT (1:200) antibodies at 4°C overnight. After washing, the slides were incubated with Duolink PLA Rabbit MINUS and PLA Mouse PLUS proximity probes, and proximity ligation was performed using the Duolink® with PLA® Technology reagent (Sigma, St. Louis, MO) according to the manufacturer's protocol. Fluorescence was detected using an EVOS FL AUTO microscope (Life Technology, NY, USA).
+ Open protocol
+ Expand
6

Visualizing Microtubule Dynamics in MCF-7 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
A total of 5 × 104 MCF-7 cells were seeded over glass
coverslips (Corning Life Sciences) for 48 h. Cells were then treated with 25
µM oxamusplatin and 100 nM colchicine (positive control) for 24 h. After
24 h, media containing drugs were removed and washed with 1X PBS. Cells were
then fixed with 4% (w/v) paraformaldehyde for 15 min and subsequently quenched
with 50 mM NH4Cl. After being washed three times with 1X PBS, cells
were blocked with 2% (w/v) bovine serum albumin (BSA) in PBS containing 0.1%
Tween 20 (PBST) for 20 min at room temperature. After removing the BSA, cells
were incubated with the primary antibody against α-tubulin (anti-α
tubulin antibody, EP1332Y, rabbit monoclonal microtubulin marker) in a 1:400
dilution for 2 h, followed by washing three times with 1X PBST and 1X PBS.
Secondary antibody incubation was done with goat anti-rabbit IgG H&L
(Alexa Fluor 488) in 1:1000 dilutions for 2 h in the dark at room temperature.
After being washed with PBST and PBS, cells were mounted on slides for imaging
using the Fluoroshield mounting medium containing DAPI. The emission of Alexa
Fluor 488 (λmax = 520 nm) was used to visualize the
microtubular network within the cells. The DAPI enabled the visualization of the
nucleus. All images were taken with a Leica SP8 confocal microscope with a 63X
objective.
+ Open protocol
+ Expand
7

Polymer Film Deposition on Glass Coverslips

Check if the same lab product or an alternative is used in the 5 most similar protocols
Films of polymer
on glass coverslips (Corning, 22 mm × 22 mm) were prepared by
applying 300 μL of 1 wt % (w/w) polymer on a coverslip and evenly
spreading the solution with the side of a pipette tip.66 (link) The coated glass coverslips were allowed to
dehydrate on a hotplate for a minimum of 2 h set at a temperature
of 40 °C. At the end of the process, the coverslip appeared flat
and clear.
+ Open protocol
+ Expand
8

Fluorescent Microscopy of Actin Cytoskeleton

Check if the same lab product or an alternative is used in the 5 most similar protocols
BME26 cells (5 × 105 cells/well) were plated on glass coverslips (Corning® Costar®, Cambridge, MA, USA) in 24-well plates, and incubated in complete medium to attach at 34 °C for 24 h. Chemical inhibitors were added at the final concentrations indicated, and 0.05% DMSO was used in negative control wells. After 24 h of treatment, the cells were washed with 0.15 M NaCl, 10 mM sodium phosphate, pH 7.2 (PBS), and immediately fixed on a buffered (PBS) formaldehyde 4% solution for 15 min at room temperature (RT). The cells were then incubated for 20 min (RT) with 200 µL of a solution containing the nuclear marker DAPI (4′,6-diamidino-2-phenylindole, dihydrochloride, molecular Probes, D1306-1 µg/mL), and 1 μL of the F-actin probe phalloidin (Alexa Fluor® 555, Molecular Probes, A34055-300 units). The cells were visualized using a Leica DMI4000 inverted fluorescent microscope equipped with two A4 (DAPI) filter cubes and N2.1 (Phalloidin). Pictures were obtained with a DFC365 FX camera, and images were mounted into a single file with the help of Adobe Photoshop (CC19.0).
+ Open protocol
+ Expand
9

Immunofluorescence Microscopy of Cultured Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells cultured on glass coverslips (Corning) were washed with PBS and fixed using 4% PFA and permeabilized using 0.25% Triton X-100. For imaging after sorting, cells were suspended in PBS at concentrations of ~ 5 × 106 cells/ml and fixed to coverslips by centrifugation. After blocking in 5% BSA, cells were incubated with primary antibodies at 4 °C, washed with PBS, and incubated with highly cross-adsorbed, AlexaFluor-conjugated secondary antibodies at room temperature. Coverslips were mounted to slides using Vectashield hard-set mounting medium with DAPI (Vector Laboratories). Images were acquired using a PerkinElmer UltraVIEW ERS spinning disc confocal imager mounted on a Zeiss AxioVert 200 inverted microscope equipped with a 63×/1.4 Oil DIC Plan-Apochromat 0.19/0.17. Primary antibodies used for fluorescence microscopy were: TFAM (Cell Signaling), cyclin B1 [GNS1] (SCBT), 8-oxo-dG [15A3] (SCBT), COXIV (Cell Signaling), and MAP LC3β [G-9] (SCBT).
+ Open protocol
+ Expand
10

Live-cell Visualization of L-WNK1 and KS-WNK1

Check if the same lab product or an alternative is used in the 5 most similar protocols
To visualize L and KS-WNK1 trafficking simultaneously in live cells, eGFP and mRuby were C-terminally tagged to L-WNK1 and KS-WNK1, respectively. HEK-293 cells were transfected as described above in cell culture. Before imaging, cells were transferred to glass coverslips (Corning). Cells were imaged at 60× magnification (Nikon CFI APO TIRF) using a Nikon Ti-E-2000 inverted confocal microscope described above using the Nikon Perfect Focus System with a 37° heated enclosure in Leibovitz’s L-15 media + 1% FBS. eGFP and mRuby were imaged using 488 nm laser excitation with 525/50 nm emission filter, and 561 nm laser excitation with 620/60 nm emission filter, respectively. Images were acquired on an iXon 897 Ultra back-illuminated camera (Andor Technology) with 100 ms exposures every 200 ms for 12 s, and/or IQ2 software was used for image acquisition and postimaging processing.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!