All reactions were carried out at 95 °C for 10 minutes, then denatured at 95 °C for 2 seconds, annealed at 60 °C for 20 seconds, and extended at 70 °C for 10 seconds. Forty cycles were performed. A melt curve was produced as temperature was increased from 70 °C to 95 °C in 0.5 °C increments within 5 seconds to ensure specificity of amplification. Taking GAPDH as reference, the relative expression level was calculated using the ΔΔCt method. The primer sequences are shown in
Sybr green
SYBR Green is a fluorescent dye used in real-time PCR (polymerase chain reaction) applications. It binds to double-stranded DNA, emitting a fluorescent signal that can be detected and quantified during the PCR process. The intensity of the fluorescence is proportional to the amount of DNA present, allowing for the quantification of target DNA sequences.
Lab products found in correlation
372 protocols using sybr green
Quantitative Analysis of Target mRNA Expression
All reactions were carried out at 95 °C for 10 minutes, then denatured at 95 °C for 2 seconds, annealed at 60 °C for 20 seconds, and extended at 70 °C for 10 seconds. Forty cycles were performed. A melt curve was produced as temperature was increased from 70 °C to 95 °C in 0.5 °C increments within 5 seconds to ensure specificity of amplification. Taking GAPDH as reference, the relative expression level was calculated using the ΔΔCt method. The primer sequences are shown in
Quantification of mRNA Expression
Quantitative PCR Analysis of NSCLC Cells
Quantifying EGF Signaling Transcripts
Quantifying Serum miRNA Profiles by RT-qPCR
Real time PCR detection was performed using SYBR Green and specific commercially available probes (Exiqon) for each miRNA of interest. Master Mix preparation and temperature cycles were performed following manufacturer’s instructions. All reactions were carried out in triplicates in Light Cycler 480 equipment (Roche) and Cq values were calculated using 2nd derivative method (Light Cycler 480 Software 1.5, Roche). miRNA expression values are expressed as ΔCq, obtained from the following formula: ΔCq = miRNA Cq—Spike In Cq.
As previously mentioned, miRNA stability after few freeze/thawing cycles was checked in our lab demonstrating high stability, as previously reported [22 (link)].
Exosomal miRNA Profiling in Urine
Serum microRNA Profiling Protocol
Profiling microRNA in Ox-LDL Treated Endothelial Cells
Quantification of miRNA Expression
Single-Cell Genomic and Transcriptomic Profiling
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