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35 protocols using chloroform methanol

1

Extraction and Saponification of Lipids

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Tissues and organs were minced with a homogenizer (Polytron® PT 1200 with tip PT-DA 1205/2, Kinematica AG, Littau, Switzerland) and extracted twice with 2 mL of chloroform/methanol (1/2, v/v), 2 mL of chloroform/methanol (1/1, v/v), and 2 mL of chloroform/methanol (2/1, v/v) (all purchased from Merck, Darmstadt, Germany). The supernatants of each extract were combined (12 mL), dried by rotary evaporation (Heidolph, Schwabach, Germany) and co-extracted phospholipids and triglycerides, which make up the major lipids in crude lipid extracts, were saponified with 4 mL of 1 N NaOH (Merck) solution for 1 h at 37 °C. Afterwards, the alkaline solution was neutralized dropwise with 400 µL of 10 N HCl (Merck), followed by dialysis against deionized water and drying by rotary evaporation. The extracts were dissolved in defined volumes of chloroform/methanol (2/1, v/v) corresponding to 0.1 mg wet weight per µL or to 0.1 µL of serum per µL dissolvent.
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2

Proximate Composition and Fatty Acid Analysis

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The proximate composition and energy level of the H prepupae meal and of the experimental diets are shown in Table 1. Feed samples were analysed for moisture (AOAC #950.46), crude protein, CP (AOAC #976.05), ash (AOAC #920.153), and ether extract, (EE; AOAC #991.36) contents according to AOAC International [44 ]. The gross energy content (GE) was determined using an adiabatic calorimetric bomb (IKA C7000, Werke GmbH & Co., Staufen, Germany).
The total lipid fraction of the H prepupae meal and of the three test diets was extracted using chloroform-methanol (2:1 v:v) (Merck KGaA, Darmstadt, Germany) mixture [45 ]. The fatty acid methyl esters (FAMEs) were obtained following the protocol described in Morrison and Smith [46 (link)] and quantified by gas chromatography (Varian 430-GC, FID) according to Tulli et al. [47 (link)] using tricosanoic acid (C23:0; Supelco, Bellefonte, PA, USA) as an internal standard.
The grading inclusion level of H meal resulted in an increase of total saturated fatty acids (SFA) and a decrease in total polyunsaturated fatty acid (PUFA) percentage in the experimental diets as shown in Table 1.
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3

Nail Keratins Extraction from Diabetic and Non-Diabetic Individuals

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The extraction of nail keratins was carried out by the Shindai method [33 (link)]. Nail clippings from diabetic and nondiabetic individuals were collected and washed with ethanol before delipidization into the mixture chloroform/methanol (2:1, V/V, Merck, Darmstadt, Germany) for 24h. The extraction of nails was done using a solution containing 25 mmol/L Tris-HCl, pH: 8.5, 2.6 mol/L thiourea, 5 mol/L urea (Bio-Rad Laboratories Inc., Richmond, CA, USA) and 5% 2-mercaptoethanol (2-ME, Fluka, St. Louis, MO, USA) at 50°C for 3 days. The mixture was filtered and centrifuged at 15,000 g (20 min, room temperature). The obtained supernatant was used as nail protein extract.
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4

Meat Fatty Acid and Peroxide Analysis

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At the end of the experiment, two broilers from each pen were slaughtered and the meat was trimmed and prepared for fatty acid profile and peroxide value measurement. The breast muscle was trimmed and stored at − 20 °C. Next, the meat sample (50 g) was mixed in a blender with 150 ml of Chloroform-methanol (Merck) in a 1:2 ratio for a minute. Then, 50 mL of sodium chloride (0.88%) was added to the mixture. Potassium chloride was used for dewatering, the aqueous phase was collected and methanol- potassium chloride 0.88% (v/v: 1/1) was mixed with the aqueous phase. The final solution was dried at 35 °C, after that, the residual solvent was evaporated under nitrogen gas pressure to obtain pure oil. Eventually, the fat was obtained for the measurement of peroxidation. To measure meat peroxidation, chloroform–acetic acid (25 ml) was added to one g of extracted fat in a ratio of 2:3. Then, one mL of potassium iodide was added to the mixture, which was stored for five min in the dark. The mixture was tittered with normal 1% potassium thiosulfate6 (link). Peroxidation value was calculated based on the amount of peroxide (meq/kg extracted fat), according to the American Oil Chemists Society22 . The fatty acid profile of the meat was analyzed by gas chromatography of the method as described by Ghasemi-Sadabadi6 (link),27 (link).
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5

Lipid Extraction and FAME Analysis

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The total lipids were extracted from the 10 mg of lyophilized biomass with a chloroform-methanol (2:1 v/v) solvent mixture (Merck, Darmstadt, Germany) using a procedure similar to the Folch’s method [34 (link)]. Fatty acid methyl esters (FAMEs) were produced from the extracted lipid by a transesterification reaction. Briefly, methanol was added to the extracted lipid with sulfuric acid as a catalyst and a transesterification reaction was allowed to occur at 100°C for 10 minutes. After the reaction, 1 ml of deionized water was added and the organic phase was separated from water phase by centrifugation at 4000 rpm for 10 minutes. A total of 1 ml of chloroform containing 0.5 mg of heptadecanoic acid (C17:0; Sigma Aldrich, St. Louis, MO, USA) was added to each tube as an internal standard. The FAMEs in organic phase were analyzed by gas chromatography (HP5890, Agilent, Santa Clara, CA, USA) with a flame ionized detector (FID) and INNOWAX capillary column (Agilent, Santa Clara, United States, 30 m × 0.32 mm × 0.5 μm).
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6

Preparation and Characterization of Liposomes

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Liposomes composed of l‐α‐phosphatidylcholine (PC; Instruchemie B.V., Delfzijl, The Netherlands) and cholesterol (Sigma‐Aldrich) in a molar ratio of 60:40 were prepared by lipid film hydration. Briefly, lipids were dissolved in a 9:1 v/v chloroform/methanol solution (Merck Millipore, Amsterdam, The Netherlands) and dried under a stream of nitrogen for 10 and 30 min of vacuum. The dried lipids were hydrated overnight with HN buffer [5 mM HEPES (GibcoTM), 150 mM NaCl (Merck Millipore), pH 7.4]. Liposome size was reduced by repeated extrusion through a polycarbonate membrane (Whatman; Maidstone, Kent, UK) with a pore size of 50 nm using a high‐pressure extruder (Lipex, Vancouver, Canada). The concentration of the liposomes was determined by a phosphate assay. The size of the liposomes was determined with a Nicomp 380 ZLS Particle Sizing analyzer (Nicomp particle sizing systems; Port Richey, FL) using dynamic light scattering in the volume‐weighing mode (Table 1). The liposomes were stored at 4°C under argon gas.
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7

Lipid Extraction and Fatty Acid Analysis

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Total lipids were extracted from liver samples with chloroform/methanol (2:1, Merck, Darmstadt, Germany) with roughly 20 times the sample weight and frozen overnight at −20 °C. Neutral and polar lipids of the sample extracts were separated by solid phase extraction before analysis of the FA composition, as described by Sissener et al. [75 (link)]. Nonadecanoic acid (19:0) was added to all samples as an internal standard for quantitative determination. Briefly, extracts were filtered and evaporated, then saponified and methylated with BF3 in methanol. FA separation was conducted using the AutoGC (Autosystem XL, Perkin Elmer Inc., Waltham, MA, USA) fitted with a flame ionisation detector. For integration, Chromeleon® version 7.2 (Thermo Scientific, Waltham, MA, USA) was used.
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8

Lipid Extraction from Brain, Retina, and Erythrocytes

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Lipids from the brain, retina and erythrocytes were extracted in a mixture of chloroform-methanol 2:1 (Merck) with 1 % 2,6-di-tert-butyl-4-methylphenol (Sigma-Aldrich) as described by Torstensen et al. (24) . In brief, chloroform-methanol was added to the samples at approximately twenty times the weight of the sample, whereas for brain samples methanol was added to the tissue and shaken for 2 h before adding chloroform to improve the extraction of PL. The samples were frozen at -20°C until further analysis.
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9

Fatty Acid Extraction and Methylation

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We used the modified method of Moilanen [31 (link)], that is itself a modification of the method described by Folch [32 (link),33 (link)]. Fatty acids extraction and preparation of fatty acid methyl esters(FAME) from red blood cells (RBC) and tissue samples were carried out as previously described [16 (link),34 (link)]. Briefly, total lipids from phospholipids of RBC membranes were extracted by adding 0.9 mL of an acidified salt solution (H2SO4 2 × 10−4 M, NaCl 0.1%). For fatty acids extraction from tissues, about 20 mg wet tissues were homogenized with 0.8 mL of ice cold 0.9% NaCl. All samples received 5.0 mL of chloroform:methanol (2:1, v/v) (Sigma-Aldrich, Milan, Italy) and the samples were mixed thoroughly and centrifuged at 1000× g for 10 min. The lower layer, containing fatty acids, was removed with care, replaced in a new tube and dried by a centrifugal evaporator (Bio-Rad, Milan, Italy). The FAME were obtained by adding toluene and BF3·MeOH 14% (Sigma-Aldrich, Milan, Italy) and incubating for 2 h at 80 °C. After the addition of toluene and 5% aqueous sodium chloride solution, the samples were centrifuged at 470× g for 10 min. Fatty acid methyl esters contained in the upper layer of the tubes, were collected and transferred into a vial and analyzed.
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10

Liver Lipid Extraction and Analysis

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Liver lipids were extracted by following the protocol developed previously [46 (link)]. Liver tissues were homogenized in 0.15 M NaCl (Sigma-Aldrich, St. Louis, MO, USA), and the tissue pulps were mixed with chloroform/methanol (2:1, v/v) (Sigma-Aldrich). After centrifugation at 400× g for 5 min, the supernatants containing liver lipids were collected. Immediately, the supernatants were measured with an enzymatic colorimetric assay (Human Gesellschaft für Biochemica und Diagnostica mbH, Wiesbaden, Germany) to examine the levels of hepatic cholesterol and triacylglycerol.
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