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18 protocols using safeseal micro tube

1

Measuring Endocrine Responses to Aggression

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Endocrinological response to the TAP was measured using salivary cortisol and testosterone. Saliva samples were taken twice prior to the TAP and three times following aggression induction (Fig. 1). Saliva for cortisol analysis was collected using Salivette sampling devices (Sarstedt, Numbrecht, Germany). Saliva for testosterone analysis was sampled in SafeSeal micro tubes (Sarstedt, Numbrecht, Germany), because collection with the Salivette cotton swabs may introduce artifacts in the analyses of testosterone38 (link). To limit the influence of diurnal variation on hormonal levels, all experimental procedures and samplings were performed in the afternoon between 3:00 and 6:00 PM39 (link),40 (link). Participants were instructed to refrain from drinking and eating for at least half an hour and from physical exercise and smoking two hours before the experiment. Saliva samples were stored uncentrifuged at −20 °C until assay. Cortisol and testosterone levels were assayed at the Department of Psychology of the Dresden University of Technology by using a luminsescence immunoassay, with a lower limit of detection of 1.8 pg/ml for testosterone and 0.276 nmol/L for cortisol. The mean and intra- and inter-assay coefficients of variation were 8% for both hormones.
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2

Mosquito Saliva Collection for Infection Studies

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Fourteen days post infection, the mosquitoes were immobilized with CO2 and the legs and wings of each mosquito were removed. Next, mosquito saliva was collected by inserting the mosquito proboscis into a 200 µL pipet tip containing 5 µL of a 50% FBS and 25% sugar solution in sterilized tap water. After 45 min, the mosquito bodies were stored at −80 °C in individual SafeSeal micro tubes (Sarstedt) containing 0.5 mm zirconium oxide beads (Next Advance). Individual mosquito saliva samples were mixed with 55 µL DMEM HEPES complete and stored at −80 °C.
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3

Lipidomic Analysis of Drosophila Tissues

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Four batches of 5 flies each were mixed with 700 µl MTBE/methanol (10/3, v/v) in 2 ml safe-seal micro tubes (Cat#: 72.695.500, Sarstedt, Nürmbrecht, DE) and disrupted with a metal bead (5 mm diameter; Cat#: 504942, Askubal Korntal-Münchingen, DE) in a Retsch MM 400 mixer mill (3 min, 30 Hz, 4°C) and lipids were extracted by shaking for 20 min at 1400 rpm and 4°C in a ThermoMixer (Eppendorf, Hamburg, DE). After the addition of 200 µl H2O, samples were again incubated 20 min at 1400 rpm and 4°C. Phase separation was induced by centrifugation for 10 min at 16,000 x g and 4°C. The upper organic phase was collected and dried under a stream of nitrogen. Lipids were washed by dissolving in 500 µl chloroform/methanol (2/1, v/v) and again dried under a stream of nitrogen and stored at −20°C or prepared immediately for LC-MS analysis. For MS analysis, lipid extracts were dissolved in 0.5 ml chloroform/methanol (2/1, v/v), 50 µl of the sample were diluted with 100 µl isopropanol and 10 µl were injected for analysis using UPLC-QTOF-MS as described (Knittelfelder et al., 2014 (link)). Data analysis was performed using the Lipid Data Analyzer (LDA) software (Hartler et al., 2011 (link)). The abundance of each TG species was normalized to the intensity of the internal standard TG 51:0 (Larodan, Solna, SWE) and to animal number.
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4

Bacterial Biomass Extraction and Fluorescence Analysis

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The colonies were harvested using sterile plastic inoculating loops and placed in Eppendorf tubes (SafeSeal microtubes 2 mL, Sarstedt AG & Co., Nürnberg, Germany) with 1 mL absolute ethanol. The samples were homogenized ultrasonically (Branson Sonifer 250, Heinemann Ultraschall, Schwäbisch-Gmünd, Germany) and then centrifuged at 400 U/min for 5 min. The supernatant was pipetted into a second Eppendorf tube before being transferred to a cuvette for use in the fluorescence spectrophotometer. Samples for the solvent and agar plates on which no bacteria were grown were prepared in the same way as controls.
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5

Protein Extraction from Myometrial Tissue

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The myometrial tissues were crushed on dry ice, and the total protein was extracted from the myometrial samples using bead-based homogenization. This was done in precooled SafeSeal Micro tubes (Sarstedt, Numbrecht, Germany) containing the appropriate volume of lysis buffer (0.08 M Tris/HCl, pH 6.8, 2% SDS, 10% Glycerol) supplemented with Halt protease & phosphatase inhibitors (Thermo Fisher Scientific/Pierce Inc, Rockford, IL). The tissues were immediately homogenized by mechanical disruption using Tissuelyser II (Qiagen, MD) for 3 minutes and then incubated on ice for 10 minutes followed by centrifugation at 8000× g for 5 minutes at 4°C. The supernatants were then sonicated on ice for 10 seconds, cooled on ice for 5 minutes, and centrifuged at 18,000× g for 15 minutes at 4°C. The supernatant was collected and stored at −80°C. The protein concentration was determined by bicinchoninic acid protein assay (Thermo Fisher Scientific Inc, Toronto, Ontario, Canada) using bovine serum albumin (Sigma, St. Louise, MO) as the reference standard.
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6

Culex pipiens Infection with Usutu Virus

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Adults of Culex pipiens (7–14 days old) were starved overnight prior to the infectious blood meal. Mosquitoes were then fed with human whole blood (Sanquin Blood Supply Foundation, Nijmegen, the Netherlands) containing 107 TCID50/ml of USUV in a dark room for 1 h using a Hemotek PS5 feeder (Discovery Workshops, Lancashire, United Kingdom). After the blood meal, mosquitoes were immobilized using 100% CO2, and only the fully engorged females were selected, three of which were immediately stored at −80°C in SafeSeal microtubes (Sarstedt, Nümbrecht, Germany) containing 0.5 mm zirconium oxide beads (Next Advance, Averill Park, NY, USA) to measure the virus uptake after engorgement. The remaining females were incubated at 28°C for 14 days and supplied with a 6% glucose solution. After incubation, 112, 115, 72, and 86 mosquitoes survived who fed on USUV-NL, USUV-IT, NL:IT=1:5, and NL:IT=5:1, respectively.
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7

Mosquito Saliva Collection Protocol

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Fourteen days post-infection, mosquito saliva was collected by forced salivation as described earlier [23 (link)]. Mosquitoes were first immobilized using 100% CO2, and their legs and wings were removed. To collect mosquito saliva, the mosquito proboscis was inserted in a 200 µl pipette tip holding 5 µl of a 1:1 mixture of FBS and 50% sugar in autoclaved tap water. After 45 min, the samples containing mosquito saliva were mixed with 55 μl DMEM HEPES complete and stored at −80 °C. The mosquito bodies were collected in SafeSeal micro tubes (Sarstedt) containing 0.5 mm zirconium oxide beads (Next Advance) and also stored at −80 °C.
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8

USUV Infection of Mosquito Biotypes

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Before the infectious blood meal, 3–18-day-old mosquitoes were starved for 1 day. Infectious blood meal experiments were conducted in the biosafety level 3 laboratory of Wageningen University & Research. Mosquitoes were orally exposed to chicken whole blood (Kemperkip, Uden, the Netherlands) or human whole blood (Sanquin Blood Supply Foundation, Nijmegen, the Netherlands) containing 107 TCID50/ml of USUV. Mosquitoes were fed in a dark room for 1 h using a Hemotek PS5 feeder (Discovery Workshops, Lancashire, United Kingdom). Infectious chicken blood was provided during four (molestus) and three (pipiens) independent experiments, whereas both biotypes were exposed to infectious human blood in three independent experiments. After the blood meal, mosquitoes were immobilized using 100% CO2, and the fully engorged females were selected. A small number of females was stored at −80 °C in SafeSeal micro tubes (Sarstedt, Nümbrecht, Germany) containing 0.5 mm zirconium oxide beads (Next Advance, Averill Park, NY, USA) to measure the viral titer in the mosquito body immediately after engorgement. All remaining females were incubated at 28 °C for 14 days. A 6% glucose solution was provided as food source.
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9

BDNF Quantification in Serum

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For BDNF analysis, 4.5 mL of venous blood from the antecubital vein was collected with a clotted blood tube at three time points. The first blood sample was taken at the beginning of the experimental session. The second blood sample was collected immediately after the learning phase and the third one was taken immediately after the intervention (exercising or relaxing).
All samples clotted within 30 minutes at a temperature of 21°C. After the clotting period, samples were centrifuged for 10 minutes with 4800 rounds per minute using the Heraeus Labofuge 200 (Thermo Fisher Scientific, Germany). Serum was immediately pipetted into separate SafeSeal microtubes (Sarstedt, Nürnberg, Germany). Samples were stored at −23°C for a mean of 13.5 days and then transferred to a −80°C freezer until the analysis started. BDNF levels in serum were measured using the Quantikine® Human BDNF Immunoassay from R&D Systems (Wiesbaden, Germany) with intra- and interassay coefficients of variation in the range between 8.8 and 11.4 for values between 7.24 and 41.6 ng/mL. The minimum detectable BDNF dose was less than 20 pg/mL, according to the manufacturer's information. BDNF analysis was performed by the Institute of Laboratory Medicine, Clinical Chemistry and Molecular Diagnostics in Leipzig.
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10

Mosquito Saliva Collection Protocol

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Fourteen days post blood meal or 7 days post injection mosquitoes were anesthetized with 100% CO2, and placed on a CO2 pad. Mosquitoes that died within the 7 or 14 days incubation period were discarded. Mosquitoes were immobilized by removing their legs and wings with forceps. The proboscis of each mosquito was inserted into a 200 μl yellow pipet tip (Greiner Bio-One) containing 5 μl of a 1:1 solution of 50% glucose solution and FBS, for a minimum of 45 min. After salivation, the mosquito bodies were added to 1.5 ml Safe-Seal micro tubes (Sarstedt, Nümbrecht, Germany) containing 0.5 mm zirconium beads (Next Advance, Averill Park, NY, United States). Each saliva sample was added to a 1.5 ml micro tube (Sarstedt) containing 55 μl DMEM-supplemented with additional Fungizone (50 μg/ml; Invitrogen), and Gentamycin (50 μg/ml; Life technologies), hereafter named DMEM-complete. Mosquito bodies and saliva samples were stored at -80°C until further processing.
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