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Ltq tune software

Manufactured by Thermo Fisher Scientific
Sourced in United States

The LTQ Tune software is a tool designed for the calibration and maintenance of Thermo Fisher Scientific's LTQ series of mass spectrometers. It provides users with the ability to optimize instrument parameters, perform diagnostic tests, and monitor system performance.

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2 protocols using ltq tune software

1

MALDI-MSI Analysis of Gd-based Contrast Agents

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MALDI-Mass spectrometry imaging (MALDI-MSI) was performed in positive
ion mode on a MALDI LTQ Orbitrap XL mass spectrometer (Thermo Scientific,
Waltham, MA, USA) equipped with a N2 laser. LTQ Tune software (Thermo
Scientific) was used to select the imaging region and step size, and Xcaliber
(Thermo Scientific, Waltham) was used to select the instrument parameters.
Imaging was performed on three control mice and three mice dosed with the
Gd-NM600 compound at 75 μm raster step size, from 130–2000 mass to
charge ratio (m/z) at 60K resolution. Two microscans were averaged at each
pixel. ImageQuest software (Thermo Scientific) was used to view raw data and
export the raw data to an imzML format. MSiReader software (1 (link)) was used to generate images unique to mice dosed
with the compound (experimental mice). Briefly, m/z elements that were present
in at least 10% of the interrogated zone (experimental mice) and in less than 5%
of the reference zone (control mice) or in over 5% of the reference zone with a
ratio greater than 2 were selected. Images for these m/z were then identified
and manually inspected.
For MALDI mass spectra of Gd-DOTA, and Gd-BOPTA (MultiHance), a mixture
of these compounds formulated at 1 μmol in distilled water and
2,5-dihydroxybenzoic acid (DHB, Acros Organics) matrix (40 mg/mL) was used to
obtain the MALDI mass spectra.
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2

MALDI Imaging Mass Spectrometry Protocol

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Matrix-assisted laser desorption/ionization-mass spectrometry imaging was performed on a MALDI LTQ Orbitrap XL (referred to as MALDI) mass spectrometer (Thermo Fisher Scientific, Waltham, MA, United States) equipped with a nitrogen laser in positive ion mode. LTQ Tune software (Thermo Fisher Scientific, Waltham, MA, United States), and Xcalibur (Thermo Fisher Scientific, Waltham, MA, United States) were used to select the imaging region and step size and the instrument parameters, respectively. The laser energy for DHB was set at either 15 or 20 μJ (later replicates needed higher laser energy to get the same signal level as earlier replicates) and the laser energy for CHCA was set at 10 μJ. Imaging was performed on three biological replicates with technical replicates at 75 μm raster step size. The mass range was set to 100–1000 m/z and the resolution to 60,000. Two microscans were averaged at each pixel.
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