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Vibracell 75 186

Manufactured by Sonics
Sourced in United States

The Vibracell 75 186 is a laboratory equipment used for cell disruption and sample preparation. It utilizes high-frequency vibration to physically break down cellular structures, enabling the extraction and isolation of cellular components, such as proteins, nucleic acids, or organelles. The device operates at a frequency range and amplitude suitable for cell lysis without excessive heat generation. Its core function is to facilitate the extraction of target analytes from biological samples through mechanical disruption.

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6 protocols using vibracell 75 186

1

Dephosphorylation Assay in Cells and Hippocampi

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For dephosphorylation experiments, cells and hippocampi were homogenized in a buffer containing 100 mM NaCl and 50 mM Tris-Cl at pH 7.4 with 1% (v/v) IGEPAL® CA-630 (ThermoFisher, Saint-Herblain, France) and a protease inhibitors cocktail without EDTA (Roche, Neuilly sur Seine, France) using either a “Precellys 24” (Bertin technologies, St Quentin-en-Yvelines, France) tissue homogenizer and followed by sonication with “vibracell 75 186” device (Sonics, Newton, CT, USA). Homogenates were centrifuged at 16,100 g for 20 min at 4°C with an Eppendorf 5415R centrifuge (Eppendorf, Hamburg, Germany), sonicated for 10 s and protein amounts normalized following a bicinchoninic acid protein assay (ThermoFisher). Samples were diluted to 1.0 mg/ml protein using homogenization buffer and incubated with 20 U/μl lambda phosphatase in MnCl2 and enzyme buffer as supplied with the lambda protein phosphatase kit (New England Biolabs, Evry-Courcouronnes, France) for 3 h at 30°C. The reaction was stopped by the addition of sample buffer (Life Technologies) and heating to 95°C for 5 min. Control samples were treated identically without the addition of lambda phosphatase.
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2

Dephosphorylation Assay Protocol

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For dephosphorylation experiments, cells or tissues were homogenised in a buffer containing 100 mM NaCl and 50 mM Tris-Cl at pH 7.4 with 1% (v/v) IGEPAL® CA-630 and a protease inhibitors cocktail without EDTA (Roche, Neuilly sur Seine, France) using either a “Precellys 24” (Bertin technologies, St Quentin-en-Yvelines, France) or a Tissue Master 125 (Omni International, Kennesaw, GA, USA) tissue homogenizer and followed by sonication with “vibracell 75 186” device (Sonics, Newton CT, USA). Homogenates were centrifuged at 16,300 g for 20 min at 4 °C with an Eppendorf 5415R centrifuge (Eppendorf, Hamburg, Germany), sonicated for 10 s and protein amounts normalized following a BCA protein assay (ThermoFisher, Waltham, MA, USA). Samples were diluted to 1.0 mg/mL protein using homogenisation buffer and incubated with 20 U/μL lambda phosphatase in MnCl2 and enzyme buffer as supplied with the lambda protein phosphatase kit (New England Biolabs, Ipswich, MA, USA) for 3 h at 30 °C. The reaction was stopped by the addition of sample buffer (National Diagnostics, Hull, UK or Life Technologies, Courtaboeuf, France) and heating to 95 °C for 5 min. Control samples were treated identically without the addition of lambda phosphatase.
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3

Quantification of Acetylcholine Levels

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Muscular tissues were lysed in RIPA lysis buffer (MILLIPORE, Burlington, MA, USA) with sodium orthovanadate (SIGMA-ALDRICH), phosphatase inhibitors (Phosphatase inhibitor cocktail 3; ROCHE, Boulogne-Billancourt, France) and protease inhibitors (Complete; ROCHE) using a Precellys 24 tissue homogeniser (BERTIN TECHNOLOGIES, Aix-en-Provence, France), followed by sonication with a Vibracell 75186 (SONICS, Newton, CT, USA). Total protein levels were quantified using a bicinchoninic acid protein assay kit (THERMOFISHER, Waltham, MA, USA). Acetylcholine concentration was determined in tissue homogenates containing equal amounts of proteins (75 µg) (Amplex red acetylcholine/acetylcholinesterase assay kit; THERMOFISHER).
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4

Acetylcholine Quantification in Distal Colon

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After the mice were killed, portions of their distal colons were removed and lysed in a RIPA buffer (Merck Millipore, Fontenay-sous-Bois, France) containing phosphatase inhibitor cocktail III (Sigma-Aldrich, Merck, Darmstadt, Germany) and protease inhibitors cocktail (Roche, Neuilly-sur-Seine, France). Briefly, tissues were crushed in the RIPA buffer using a “Precellys 24” tissue homogenizer (Bertin technologies, St Quentin-en-Yvelines, France), followed by sonication with a “Vibra-Cell 75 186” device (Sonics, Newton, CT, USA). The amount of proteins was assessed with a Bradford reagent using a BioPhotometer D30 spectrophotometer (Eppendorf, Montesson, France). Acetylcholine (ACh) concentration was determined in tissue homogenates using Amplex Red, acetylcholine/acetylcholinesterase assay kit (Invitrogen Thermofisher Scientific, Waltham, MA, USA) and normalized to the protein amount.
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5

Chiral Silica Nanoribbons for Amyloid Fibrillation

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Chiral silica nanoribbons were fabricated as previously described [28 (link), 29 (link)]. Briefly, the self-assembly of dicationic surfactant, 1,2-ethane-bis(dimethyldecylammonium) with chiral counterions, L or D tartrate forming nanometric helices (right-handed or left-handed respectively) were used as templates to form silica nanoribbons through sol-gel polycondensation with controlled dimensions and handedness. The silica nanoribbons were cut and individualized by sonication (Vibra-cell 75186, Sonics & Materials) to be colloidal suspensions [30 (link)]. Lyophilized white powder of human islet amyloid polypeptide (IAPP; KCNTATCATQRLANFLVHSSNNFGAILSSTNVGSNTY; 2–7 disulfide bridge, 3,904.5 Da, purity >95%; AnaSpec; HPLC and mass spectroscopy characterizations of IAPP refer to Figs. S1&S2, Supplementary Information) was freshly dissolved in Milli-Q water at room temperature. ThT dye (319 Da) was acquired from Sigma-Aldrich. Propidium iodide (PI, excitation/emission: 535 nm/617 nm) was purchased from ThermoFisher. Poly L-lysin (0.01%) was acquired from Sigma-Aldrich and applied for cell staining.
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6

Quantifying Acetylcholine and Cholinesterase

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Biopsies were lysed in RIPA lysis buffer (Millipore, Burlington, MA, USA) containing sodium orthovanadate (Sigma-Aldrich, USA), phosphatase inhibitors (Phosphatase inhibitor cocktail 3; Sigma-Aldrich, USA), and protease inhibitors (Complete; Roche Diagnostics, France) using a Precellys 24 tissue homogenizer (Bertin Technologies, France), followed by sonication with a Vibracell 75,186 (Sonics, USA). Total protein levels were quantified using an Eppendorf Biophotometer (France) with Bradford solution (Sigma-Aldrich, USA). ACh concentration and acetylcholinesterase expression (AChE) were determined in tissue homogenates containing equal amounts of protein (100 µg) (Amplex red ACh/AChE assay kit; Thermo Fisher).
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