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5 protocols using vectastain elite avidin biotin complex kit

1

Immunohistochemical Analysis of LC3BII Autophagosome Marker

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Paraffin-embedded specimens were deparaffinized in xylene and dehydrated in graded alcohol. 3% hydrogen peroxide in phosphate buffered saline was used to inhibit endogenous peroxidase activity. After 20 min incubation with a protein-blocking solution consisting of PBS with 1.5% normal goat serum (DAKO, Glostrup, Denmark), sections were incubated overnight at 4 °C with the appropriate dilution of Rabbit monoclonal [EPR18709] to LC3BII—Autophagosome Marker (Abcam, UK) antibody. After that, the sections were treated for 30 min with the correct dilution of biotinylated anti-mouse IgG (Vectastain Elite Avidin–Biotin Complex kit, Vector Labs, Burlingame, CA). Stable 3,3′-diaminobenzidine tetrahydrochloride was used to observe immunocomplexes (Dojin, Kumamoto, Japan). The sections were washed in distilled water and counterstained with Mayer's hematoxylin for 10 s [22 (link)].
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2

Immunohistochemical Analysis of Cleaved Caspase-3

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Deparaffinized tissue sections prepared as described above were reacted with a tissue retrieval solution for 5 min at 120 °C, after which their endogenous peroxidase activity was blocked using 1% hydrogen peroxide for 1 h at 22 °C. Following three PBS washes, slides were incubated with rabbit Cleaved caspase-3 antibody (Cell signaling, Denver, MA, USA) diluted in PBS (1:200) in a humid chamber for 24 h at 4 °C. After PBS washes, the slides were incubated with biotinylated anti-rabbit IgG (Vector, Burlingame, CA, USA) diluted in PBS (1:250) for 2 h at 22 °C. Information regarding product number of the antibodies used in this study are presented in supplementary material (Table S1). After washes in PBS, the slides were reacted with a VECTASTAIN-Elite avidin-biotin complex Kit (Vector, Burlingame, CA, USA) for 30 min at 22 °C. In order to visualize the immunoreactivities, the slides were reacted with the chromogen 3,3’-Diaminobenzidine (DAB) (Vector, Burlingame, CA, USA) for 30 min at 22 °C. The three HFPs (400×) per rat were randomly chosen and visualized by DM4 up-light microscopy (Leica, Wetzlar, Germany). The number of the cleaved caspase-3-immunoreactive cells (dark-brown colored) was averaged across groups.
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3

Quantification of DNA Damage in Tumor Sections

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All in vitro studies were performed from a minimum of three experimental replicates. Staining was performed on formalin-fixed paraffin embedded tumor sections (3-5 µm) using the Vectastain elite avidin-biotin complex kit (Vector Laboratories, Burlingame, CA, USA). Briefly, after antigen retrieval with 10 mM sodium citrate (pH 6.5) paraffin sections were incubated with rabbit anti-γ-H2AX monoclonal antibody (Ser139) (Novus Biologicals, Littleton, CO) in blocking solution (1% serum in PBS plus 0.4% Triton X-100, ABC Elite Kit, Vector Laboratories) at 4ºC overnight. All sections were processed with the ABC Elite Kit (Vector Laboratories) per manufacturer’s recommendation. The immunoreactivity was visualized using peroxidase-DAB (3,3′-diaminobenzidine). All sections were counterstained with Mayer’s hematoxylin, dehydrated and cover slipped. Negative controls with no primary antibody were used to assess nonspecific staining. Two tumors per time point, a minimum of three sections per tumor and 20 fields per section were quantified.
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4

Immunohistochemistry of Neuroinflammation

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Sections from control (n = 9), LPS + hyperoxia (n = 6) and LPS + hyperoxia + hAEC (n = 7) pups were exposed to heat-induced epitope retrieval using citrate buffer (pH 6) and blocked in 2% (w/v) bovine serum albumin in phosphate-buffered saline for 1 h and primary antibody applied overnight at 4 °C in a humid chamber. Immunohistochemistry was performed on paraffin-embedded sections to detect microglia (ionized calcium-binding adaptor molecule 1 (Iba1), 1:1000, 019-19741; Wako Pure Chemical Industries, Osaka, Japan), activated microglia (CD68, 1:100, MCA1957; ABD Serotec, Oxford, UK) and astrocytes (glial fibrillary acidic protein (GFAP), 1:1000, M7240; DAKO, CA, USA), as described previously [37 (link)]. hAEC cell tracking was performed using anti-human HLA-G (HLA-G clone 87G, 1:100, ALX-805-719-c100; Enzo Lifesciences, Australia). Biotinylated secondary antibodies (1:200) were applied for 1 h at room temperature in a humid chamber and reacted with the VectaStain Elite avidin–biotin complex kit (1:200; Vector Laboratories, CA, USA) using 3,3′-diaminobenzidine as the chromagen. Following counterstaining with haematoxylin, slides were coverslipped with DPX (Sigma-Aldrich, MO, USA). Omission of the primary antibody resulted in no specific staining. For each antibody, all sections were stained simultaneously to ensure uniform conditions for subsequent analysis.
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5

Immunohistochemistry Visualization of VCP

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Immunohistochemistry was done on formalin-fixed, paraffin-embedded, 3 μm lymphoma and normal lymph node sections using the VectaStain Elite Avidin-Biotin Complex Kit (Vector Laboratories, Inc.) as directed by the manufacturer. Sections were probed with anti-VCP mouse monoclonal antibody (Abcam Inc., catalog number ab11433, dilution 1:4000) as directed by the manufacturer, except blocking was done with 5 % normal serum in TBST for 1 h at room temperature and incubation with the secondary antibody (biotinylated anti-mouse reagent, Vector Laboratories, Inc., dilution 1:500) was done for 30 min. Staining was done using 3,3’-diaminobenzidine peroxidase substrate kit (Vector Laboratories, Inc.) as directed by the manufacturer. Negative controls were done using the primary antibody described above that was pre-incubated overnight at 4 °C with VCP peptide (792–806, Abcam Inc., catalog number ab39788) in a 1:10 antibody:peptide ratio.
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