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Saccharomyces cerevisiae invsc1

Manufactured by Thermo Fisher Scientific
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Saccharomyces cerevisiae INVSc1 is a strain of the yeast Saccharomyces cerevisiae. It is a laboratory organism commonly used in research and various biotechnological applications.

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5 protocols using saccharomyces cerevisiae invsc1

1

Isolation and Identification of Thraustochytrid Strain F26-b

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Thraustochytrid strain F26-b was isolated from fallen leaves of Rhizophora mucronata collected at Ishigaki Is., Okinawa, Japan, and identified as Aurantiochytrium limacinum based on 18S rRNA gene analysis and the microscopic morphological features [19 (link)]. All cold acyl-CoAs were purchased from Avanti Polar Lipids (Alabaster, AL) and [1-14C]palmitoyl-CoA (0.1 mCi/ml) was obtained from American Radiolabeled Chemicals Inc. (Saint Louis, MO). Synthetic complete medium and the yeast nitrogen base were obtained from MP Biomedica (Morgan Irvine, CA). The yeast overexpression vector pYES2/CT and Saccharomyces cerevisiae INVSc1 were purchased from Thermo Fisher Scientific (Carlsbad, CA). All other chemicals were obtained from either Sigma Aldrich (St. Louis, MO) or Wako (Osaka, Japan). The sequences of primers used in this study are listed in S1 Table. PLAT2 gene sequence is deposited at DDBJ as accession number LC422645.
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2

Bacterial and Yeast Cultivation Methods

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All bacterial strains used in this study are listed in Table S1 in the supplemental material. P. aeruginosa PA14 and E. coli S17-λ-pir were routinely grown in 5 ml lysogeny broth (LB) medium or struck on 1.5% LB agar plates with appropriate antibiotics, if necessary. Overnight cultures were grown in LB at 220 rpm on a roller drum. Saccharomyces cerevisiae InvSc1 (Thermo Fisher) used for cloning was maintained on yeast peptone dextrose (YPD; 1% Bacto yeast extract, 2% Bacto peptone, and 2% dextrose) with 2% agar. Synthetic defined medium without uracil (Sunrise Science Products) was used to select for yeast with the construct. All chromosomal point mutations were constructed using the pMQ30 shuttle vector, while the pMQ72 multicopy plasmid was used for ectopic expression. All plasmids and oligonucleotides used in this study are listed in Tables S2 and S3, respectively.
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3

Antimicrobial Diffusion through Contact Lenses

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A biological assay was designed to verify that tested antimicrobials were penetrating the contact lens and retained functionality. The contact lens diffusion model was performed as described previously (Figure 1); however, at 10 minute intervals over a 1 hour period, 10 μl aliquots of the with diffused antibiotic were spotted onto lawns of susceptible test organisms. In this assay Staphylococcus epidermidis strain RP62A was used for moxifloxacin and PHMB, and Saccharomyces cerevisiae InvSc1 (Invitrogen) was used for amphotericin B. Microbial cultures were grown overnight in Tryptic Soya Broth (TSB) or yeast extract, peptone, and dextrose broth (YPD). Five microliters of overnight culture was added to 150 μl of PBS and plated onto nutrient rich agar plates as a lawn and dried briefly before addition of the test aliquots. The plates were incubated overnight at 37°C for S. epidermidis and 30°C for S. cerevisiae. Zones of growth inhibition were visually assessed. Prevention of microbial growth indicated that the antimicrobial was capable of diffusing through the SH contact lens applied directly onto the lawns. The sensitivity of the assay was established using a 2-fold serial dilution series of the test antimicrobials. The limit of detection was 4.88 μg/ml for moxifloxacin, 48.8 μg/ml for PHMB, and 39.1 μg/ml for amphotericin B.
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4

Yeast-based Production of GLA and SDA

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Saccharomyces cerevisiae INVSc1 (Invitrogen, USA) was used for the expression of PcD6DES and subsequent production of GLA and SDA. Yeast transformation was carried out in accordance with the manufacturer’s protocol. Yeast culture and induction of PcD6DES were performed as follows: Yeast cells containing pYES2-PcD6DES were cultured in uracil-deficient medium containing with 2% raffinose and 1% Tergitol NP-40 at 30 °C. At O.D600 = 0.5–0.6, 0.5 mM of the substrates LA and ALA with 2% galactose as an inducer were added to the culture, followed incubation for 3 days at 20 °C.
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5

Heterologous Expression of IpFAD2 in Yeast

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Constructs containing the IpFAD2 genes were transformed into Saccharomyces cerevisiae INVSc1 (Invitrogen, Carlsbad, CA, USA) by the LiAc/SS carrier DNA/PEG method. Transformants were incubated in yeast nitrogen base (YNB) liquid medium at 28 °C for 36 h with rotary shaking at 180 rpm and then spread on synthetic defined medium without histidine (SD-his, Clonetech, Mountain View, CA, USA) solidified medium supplemented with glucose. The colonies growing on SD-his medium were then cultured in SD-his liquid medium for another two days and then centrifuged. The pellets were washed with distilled water twice and sub-cultured in SD-his liquid medium containing galactose (2%, w/v) for 48 h. Yeast cells were collected for fatty acid analysis.
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