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8 protocols using orius sc 1000b camera

1

Visualizing Myosin-II Localization in U2OS Cells

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U2OS cells were loaded with 400 μM oleic acid overnight and fixed with 4% paraformaldehyde in MES-sucrose buffer (10 mM MES/138 mM KCl/3 mM MgCl2/2 mM EGTA/11.14% sucrose) for 2 h. The cells were then permeabilized with 0.01% saponin in 0.1% BSA/0.1 M Na-PO4 pH 7.4 for 8 min, labelled with the rabbit anti-NMIIa antibody (Covance, PRB-440 P 1:50) for 2 h followed by the nano-gold-conjugated anti-rabbit Fab-fragments for 1 h (Nanoprobes, #2004, 1:60), post-fixed in 10% glutaraldehyde, and quenched in 50 mM glycine. The nano-gold particles were intensified using the HQ SILVER Enhancement kit according to the manufacturer's instructions (Nanoprobes) followed by gold toning in subsequent incubations in 2% NaAcetate, HAuCl4 and 0.3% Na2S2O3·5H2O. The cells were treated with 1% OsO4 supplemented with 15 mg ml−1 K4[Fe(CN)]6 and flat-embedded in Epon as described earlier39 (link). Ultrathin sections were cut using Leica UCT microtome, picked on pioloform coated single slot grids, post-stained with uranyl acetate and lead citrate, and observed with the Jeol JEM-1400 microscope at 80 kV. Images were acquired with the Gatan Orius SC 1000B camera.
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2

Transmission Electron Microscope Tomography

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Single-axis tilt series were recorded on a JEM 2100 or a JEM 1400 transmission electron microscope (JEOL) operated at 200 or 120 kV, respectively. The tomography plug-in of the Digital Micrograph software (Gatan) was used to acquire images automatically every 2° over a ±60° range using an Ultrascan 2K × 2K CCD camera (Gatan) at a pixel size of 1.01 nm (JEM 2100) or a Gatan Orius SC1000B camera at a pixel size of 0.64 nm (JEM 1400) at a magnification of ×10,000. Tomograms were reconstructed with IMOD by the simultaneous iterative reconstruction technique (SIRT). The nominal resolution in our tomograms is estimated at about 4 nm according to the Crowther criterion62 (link).
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3

Immuno-EM Localization of GRASP55 in HeLa Cells

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Pre-embedding immuno-EM was done as described in (Salonen et al., 2003 (link)). Briefly, HeLa cells grown on glass coverslips were fixed with PLP-fixative (McLean and Nakane, 1974 (link)) for 2 h at room temperature, permeabilized with 0.01% saponin, and immunolabeled with anti-GRASP55 (Proteintech) and nano-gold-conjugated anti-Rabbit IgG (Nanoprobes). Cells were then postfixed with 1% glutaraldehyde in 0.1 M phosphate buffer, pH 7.4, and quenched with 50 mM glycine. Nano-gold particles were intensified using the HQ SILVER Enhancement kit (Nanoprobes) followed by gold toning in subsequent incubations in 2% NaAcetate, 0.05% HAuCl4 and 0.3% Na2S2O3 .5H2O. Cells were embedded into Epon (Puhka et al., 2007 (link)), and ultrathin sections were cut using Leica UCT6 microtome. Sections were post-stained with uranyl acetate and lead citrate, and observed with a Jeol JEM-1400 microscope operated at 80 kV. Images were acquired with a Gatan Orius SC 1000B camera.
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4

Mitochondrial Ultrastructural Analysis

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For ultrastructural analysis of mitochondria, fragments of the adipose tissue obtained from wild type and IL10 mice were dissected, fixed with 2.5% glutaraldehyde in cacodilate buffer 0.1 M (pH 7.2) and stored 2 h in the same fixative at −4 °C. The specimens were post fixed with osmium in imidazole buffer 0.2 M (pH. 75), and then dehydrated and embedded in Durcupan ACS (Fluka, Steinheim, Switzerland). Ultrathin cross sections were collected on formvar coated copper grids, contrasted with uranyl acetate and lead citrate, and examined in a Tecnai G2 Spirit Twin (FEI, Hillsboro, OR) transmission electron microscope operated at 80 kV. Images were acquired using a Gatan Orius SC1000B camera (Pleasanton, CA, USA). Mitochondria density, size and morphology were analyzed using ImageJ as previously described [62 (link)].
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5

Electron Microscopy Sample Preparation

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Cells grown on fibronectin-coated coverslips were fixed with 2.5% glutaraldehyde in sodium cacodylate buffer (pH 7.4) supplemented with 2 mM CaCl2 for 25 min at RT. After washing, the cells were post-fixed with (non-reduced) 1% osmium tetroxide in 0.1 M sodium cacodylate buffer (pH 7.4) for 1 h at RT, dehydrated in an ethanol series, and flat embedded as described previously [56 (link)]. Ultrathin sections were post-stained with uranyl acetate and lead citrate, and imaged using a Jeol JEM-1400 microscope equipped with Orius SC 1000B camera (Gatan).
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6

Ultrastructural Analysis of Stargardt Disease

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Fragments of retina-RPE-choroid were fixed in 2.5% glutaraldehyde in 0.1 M cacodylate buffer. After dehydration in ethanol, the tissue fragments were embedded in Epon as previously reported [33 (link)]. Ultrathin sections were cut on a Leica Ultracut ultramicrotome, collected on 200-mesh copper grids, and stained with uranium and lead salts. The images for Stargardt donor eye #1 (STGD #1) and control (CTRL #1) were captured at 15,000x using a JEM 1200-EX electron microscope (JEOL, Peabody, MA) with wide angle (top mount) and the BioScan 600 W 1x1K digital camera (Gatan) and Digital Micrograph acquisition software (Gatan). The images for Stargardt donors’ eyes #2 and #3 (STGD #2 and STGD #3) and corresponding control eyes (CTRL #2i and CTRL #2ii) were collected using a JEM-1400 electron microscope (JEOL Peabody, MA) with ORIUS SC1000b Camera and Gatan Microscopy Suite Software (Gatan, Inc., Pleasanton, CA).
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7

Ultrastructural Analysis of Adherent Cells

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Cells grown on fibronectin-coated coverslips were fixed with 2.5% glutaraldehyde in sodium cacodylate buffer, pH 7.4, supplemented with 2 mM CaCl2 for 25 min at RT. After washing, the cells were post-fixed with (non-reduced) 1% osmium tetroxide in 0.1 M sodium cacodylate buffer, pH 7.4, for 1 h at RT, dehydrated in ethanol series and flat embedded as described previously [56] . Ultrathin sections were post-stained with uranyl acetate and lead citrate, and imaged using a Jeol JEM-1400 microscope (Jeol Ltd) equipped with Orius SC 1000B camera (Gatan Inc.).
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8

Transmission Electron Microscopy of RPE

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Karnovsky's fixed tissue was osmium tetroxidetreated, dehydrated, and embedded in araldite resin.
Images of the RPE were taken using a Jeol 1,010 transmission electron microscope (Jeol, Welwyn Garden City, United Kingdom) fitted with a Gatan Orius SC1000B camera (Gatan, Abingdon, United Kingdom).
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