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3 protocols using zm 447439

1

Mitotic Regulators and Cytoskeletal Dynamics

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The following primary antibodies were used: rabbit anti-anillin (1:2000; IF, 1:1000; blot), mouse monoclonal anti-GFP (1:1000; 3E6, Invitrogen), mouse monoclonal anti-cyclin B1 (1:2000; BD Biosciences), mouse monoclonal anti-β actin (1:20,000, Abcam), mouse monoclonal anti-RhoA (1:1000; 26C4, Santa Cruz Biotechnology), rabbit anti-Ect2 (1:1000, Santa Cruz Biotechnology), mouse monoclonal anti-GST (1:2000; B-14, Santa Cruz Biotechnology), mouse monoclonal anti-Flag (1:2000; M2, Sigma-Aldrich), rat monoclonal α-tubulin (1:1000; YL1/2, Millipore).
Reagents used in this study are Lambda protein phosphatase (New England Biolabs), Gibson Assembly Master Mix (New England Biolabs), nocodazole (0.2 μg/ml; EMD Biosciences), monastrol (100 μM; R&D Systems), thymidine (2.5 mM; EMD Biosciences), BI-2536 (200 nM; a gift from P. Jallepalli), ZM-447439 (4 μM; R&D Systems), RO-3306 (10 μM; R&D Systems).
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2

Cell Cycle Synchronization and Protein Knockdown

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For synchronization, cells were seeded in media containing 2mM thymidine for 24 hr, released into fresh media for 12 hr, arrested again in 2mM thymidine for 12 hr, released for 8–12 hr, and fixed for immunofluorescence with 2% PFA in PHEM buffer + 0.5% Triton X-100 or ice-cold methanol. For knock-down experiments in stable T-Rex HeLa cell lines lines (Fig. 3, Fig. 4D and Fig. S4), transfection of Ndc80 siRNA (see Key Resource Table for sequence, 75 nM final concentration) was done at first thymidine release and second thymidine block using RNAiMAX (Life Technologies), according to manufacturer’s description. For experiment depicted in Fig. 3E 3.3 µM Nocodazol (Sigma-Aldrich) and 2 µM ZM 447439 (R&D Systems) were added two hours before fixation. For knockdown and replacement experiments (Fig. 4A–C), HeLa cells were co-transfected at the first thymidine release with siRNA oligos (75 nM for Ndc80, 20 nM for Mad2) and 100 ng rescue plasmid using Lipofectamine 2000 (Life Technologies). Cells were transfected a second time with siRNA oligos at the second thymidine block using RNAiMAX (Life Technologies). For mock and siRNA only controls, an empty pEGFP vector was used as the rescue plasmid. For transient transfection Ndc80 tail experiments, 75 nM GAPD siRNA oligos (Thermo Scientific) were included as mock controls.
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3

Assessing Small Molecule Inhibitors

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All chemicals were resuspended in DMSO. NSC697923 (Sigma-Aldrich) was used at 20 µM. Nocodazole (Sigma-Aldrich) was used at 50 nM. MG132 (EMD Biosciences) was used at 10 µM. CC0651 (Thermo Fisher Scientific) was used at 50 µM. Taxol (Life Technologies) was used at 1 µM. PYR-41 (Santa Cruz Biotechnology) was used at 20 µM. TAK-243 (formerly MLN7243) was a gift from Hidde Ploegh (Whitehead Institute) and used at 25 µM. PR-619 (Sigma-Aldrich) was used at 100 µM. ZM447439 (R&D Systems) was used at 2 µM. VX680 (LC Laboratories) was used at 2.5 µM. Flavopiridol (Santa Cruz Biotechnology) was used at 5 µM. AZ3146 (Tocris) was used at 2 µM. BI2536 (Thermo Fisher Scientific) was used at 10 µM. Okadaic acid (VWR) was used at 1 µM. To dose cells, drugs were diluted in fresh media and then added to the cells. For immunofluorescence, cells were dosed for 15 min before fixation.
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