The largest database of trusted experimental protocols

4 protocols using irdye 800rd goat anti mouse igg

1

Western Blot Analysis of Melanoma Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Melanoma cells were seeded at a density of 6 × 105 cells ml−1 in 12-well plates and lysed the next day with LDS buffer 1× (Life Technologies). Lysates were denatured at 95 °C for 5 min and sonicated. SDS–PAGE and western blotting were performed using standard procedures. Membranes were visualized and bands quantified using an Odyssey Fc (LI-COR). Loading controls were run on the same blot. Individual 680 and 800 channels were co-visualized in greyscale on the same image. Primary antibodies were: LAP1 (1:1,000; #21459-1-AP), Lamin A/C (1:1,000, #10298-1-AP), Lamin B1 (1:1,000, #12987-1-AP), Lamin B2 (1:1,000, #10895-1-AP) from Proteintech; pThr18/Ser19-MLC2 (1:750, #3674), MLC2 (1:750, #3672) from Cell Signaling Technology; GAPDH (1:10,000, #MAB374) from Merck. Secondary antibodies were: IRDye 680RD goat anti-rabbit IgG (1:10,000, #925-68071) and IRDye 800RD goat anti-mouse IgG (1:10,000, #925-32210) from LI-COR.
+ Open protocol
+ Expand
2

Epigenetic Changes in Huntington's Disease

Check if the same lab product or an alternative is used in the 5 most similar protocols
Protein lysates of NPC cell pellets (Control, 45Q, and 81Q) were prepared using RIPA lysis buffer (RIPA Buffer, 1 mM PMSF, 5 μm Z-VAD, 1 mM NaVan, and 1 × Complete Protease Inhibitor Mixture tablets). Protein lysates were sonicated for 2 cycles of 30 s on, 30 s off. 35 μg of protein lysates were separated on 10% TGX FastCast gel (Biorad) and transferred on nitrocellulose membranes (Biorad). The following primary antibodies were used: CUL4A (1:1000; Proteintech Cat# 14851-1-AP, RRID:AB_2261175), H3 (1:2500, Abcam Cat# ab1791, RRID:AB_302613), H3K27me3 (1:500, Millipore Cat# 07-449, RRID:AB_310624), H3K9me1 (1:500; Thermo Fisher Scientific Cat# MA5-33385, RRID:AB_2815523), H3K9me2 (1:500; Thermo Fisher Scientific Cat# 720092, RRID:AB_2532802), and β-actin (1:5000; Sigma-Aldrich Cat# A5441, RRID:AB_476744) (Supplemental Table S1). Antibody validation proved by venders. Membranes were incubated with primary antibodies at 4 °C overnight. The following secondary antibodies (1:5000) were used: IRDye® 680RD Goat anti-Rabbit IgG and IRDye® 800RD Goat anti-Mouse IgG (LI-COR). The membrane was imaged using the LI-COR Imaging System and Odyssey V3.0 software (LI-COR), followed by intensity analysis with GelAnalyzer. Statistical significance was tested using a two tailed t-test with a P-value threshold of 0.05.
+ Open protocol
+ Expand
3

Quantification of Melanoma Cell Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Melanoma cells were seeded at a density of 6x105 cells/ml in 12-well plates and lysed the next day with LDS buffer 1X (Life Technologies). Lysates were denatured at 95°C for 5 minutes and sonicated. SDS-PAGE and western blotting was performed using standard procedures. Membranes were visualised and bands quantified using an Odyssey Fc (LI-COR). Loading controls were run on the same blot. Individual 680 and 800 channels were co-visualised in greyscale on the same image. Primary antibodies were: LAP1 (1:1000; #21459-1-AP), Lamin A/C (1:1000, #10298-1-AP), Lamin B1 (1:1000, #12987-1-AP), Lamin B2 (1:1000, #10895-1-AP) from Proteintech; pThr18/Ser19-MLC2 (1:750, #3674), MLC2 (1:750, #3672) from Cell Signalling Technology; GAPDH (1:10,000, #MAB374) from Merck. Secondary antibodies were: IRDye 680RD goat anti-rabbit IgG (1:10,000, #925-68071) and IRDye 800RD goat anti-mouse IgG (1:10,000, #925-32210) from LI-COR.
+ Open protocol
+ Expand
4

Stimulation of CXCR2 signaling in HEK293 cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
HEK293-CXCR2 cells were plated in a 6 well-plate at a density of 40,000 cells per well in reduced serum media (0.5% FBS). Approximately 24 hours later, cells were serum-starved in DMEM supplemented with 1% Pen/Strep at 37 °C with 5% CO2 for 2 hours. Following serum starvation, cells were stimulated with indicating concentrations of CXC-ligands for 5 mins and stopped with ice-cold PBS. Subsequently, 200 mL of 1 x Laemmli buffer was added per well. Lysates were collected, resolved on 4 to 20% Mini-protean TGXTM Gel (4561094, Bio-Rad) and transferred onto a nitrocellulose membrane (1215458, GVS). After transfer, the membrane was incubated with TBS buffer supplemented with 0.1% Tween 20 (TBS-T) and 3% BSA at room temperature for 1 hour on a shaker. The membrane was probed with primary antibodies (anti-phosphoERK1/2 (Cell Signaling 4370S)), anti- anti-ERK1/2 (Cell Signaling 4696S) diluted 1:1000 in TBS buffer supplemented with 0.1% Tween 20 and 3% BSA at 4 °C overnight. The next day, the membrane was washed with TBS-T four times and probed with the secondary antibodies (goat anti rabbit IgG, 680 RD (926–68071, LiCor), IRDye® 800RD Goat anti-Mouse IgG (926–32210, LiCor) at 1:10,000 dilution at room temperature for 1 hour. After another four washes with TBS-T, protein bands on the membrane were visualized using Li-Cor Odyssey CLx and analyzed using StudioLite software [20 (link)].
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!