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244 protocols using enhanced chemiluminescence reagent

1

Western Blot Analysis of Apoptosis Markers

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Western blot analysis was performed as previously described [24 (link)]. Cells were lysed in RIPA lysis buffer (Beyotime, China) on ice and total protein was quantified by a bicinchoninic acid assay. Equal amounts of protein samples (40 µg) were loaded onto each lane of 10 % sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes (Millipore, USA). The membranes were incubated with the primary antibodies at 4 °C overnight following blocking with 5 % non-fat milk for 1 h. Then, the membranes were incubated with secondary antibodies for 1 h. Finally, signals were visualized with enhanced chemiluminescence reagent (Bio-Rad, USA), and the intensity of band was quantified using image software (Bio-Rad, USA). The antibodies against HMGA1, cleaved-caspase-3, bax, bcl-2, CHOP, GRP78 and β-actin were purchased from Invitrogen. β-actin was chosen as an internal control.
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2

Western Blot Analysis of Protein Expression

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Protein samples were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred onto a polyvinylidene fluoride membrane (Millipore, Darmstadt, Germany). The membrane was washed three times and blocked by soaking in Tris-buffered saline + Tween (TBS-T) buffer (50 mM Tris-HCl (pH 7.5), 150 mM NaCl, and 0.1% Tween 20) containing 5% bovine serum albumin (GenDEPOT) for 30 min. The membrane was incubated with primary antibodies (1:1000) overnight at 4 °C. Then, the membrane was washed three times and incubated with the appropriate secondary antibody (1:2000) for 1 h at room temperature. All primary and secondary antibodies (β-actin, Nrf2, HO-1, SOD2, catalase, Gpx-1, Bax, Bcl/Bcl-xL, JNK/p-JNK, ERK/p-ERK, and p38/p-p38) were obtained from Abcam (Cambridge, UK) and Cell Signaling Technology (Beverly, MA, USA). Protein expression was visualized using enhanced chemiluminescence reagent (Bio-Rad, Hercules, CA, USA) according to the manufacturer’s instructions. Quantitative analysis was conducted using ImageJ software (version 1.52a for Windows; NIH, Bethesda, MD, USA).
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3

Western Blot Protein Analysis

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Cell lysates were separated through 7.5–15% sodium dodecyl sulfate-polyacrylamide gel electrophoresis. The proteins separated on the gels were transferred onto polyvinylidene difluoride (PVDF) membranes (EMD Millipore, Hayward, CA, USA). The blots were blocked with 5% skim milk solution at room temperature for 1 h and then immunolabeled with primary antibodies (dilution 1:2000–1:10,000) overnight at 4 °C as previously described [53 (link)]. The membranes were washed using Tris-buffered saline with 1 × Tween-20 and then incubated with horseradish peroxidase-conjugated secondary antibodies (dilution 1:3000) at room temperature for 1 h. The immunolabeled protein bands were detected using an enhanced chemiluminescence reagent (Bio-Rad Laboratories, Hercules, CA, USA) according to the manufacturer’s instructions. Band density was analyzed using ImageJ 1.5 software (NIH, Bethesda, MD, USA), and the expression levels were determined as the normalized ratio of each target protein to β-actin.
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4

Protein Immunoblot Analysis Protocol

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Cell lysates were prepared using lysis buffer (1% SDS, 1 mM Na-vanadate, 10 mM Tris-HCl pH 7.4) in the presence of 0.1 mM phenylmethylsulfonyl fluoride and protease inhibitor cocktail. Proteins (40 μg) were subjected to SDS-PAGE and electroblotting on nitrocellulose membranes, which were probed with specific primary and HRP-conjugated secondary antibodies. Immunoblots were revealed by enhanced chemiluminescence reagent (Bio-Rad). Images were acquired using the VersaDoc 1000 imaging system and individual band densities were integrated by Quantity One software (BioRad).
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5

Western Blot Analysis of Cell Cycle Proteins

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Cells were lysed in lysis buffer containing 25 mM Tris-HCl, pH 7.4, 150 mM NaCl, 5 mM EDTA, 1% Triton X-100, 10 mM sodium pyrophosphate, 10 mM β-glycerophosphate, 1 mM sodium orthovanadate, 10% glycerol, and protease inhibitors (Roche, Basel, Switzerland). Each protein sample was separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred onto polyvinylidene difluoride membranes. After blocking, blots were sequentially incubated with a primary antibody and peroxidase-conjugated secondary antibody. Blots were developed by enhanced chemiluminescence reagent (Bio-Rad, Hercules, CA, USA), and the intensity of bands was quantified using Image Lab software (Bio-Rad). The following primary antibodies were used: rabbit anti-p21 (C-19; Santa Cruz Biotechnology, Santa Cruz, CA, USA), mouse anti-p27 (F-8; Santa Cruz Biotechnologies), and mouse anti-p53 (DO-1; Santa Cruz Biotechnologies).
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6

Protein Expression Analysis in OSCC

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Proteins from 68 pairs of OSCC tissues and ANTs were extracted using radioimmunoprecipitation assay (RIPA) lysis buffer containing a proteinase inhibitor cocktail (Sigma, USA). Total protein concentration was determined using the Bradford method. Equal amounts of total protein from each sample were loaded onto a 10% gel for sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) separation and transferred to polyvinylidene difluoride (PVDF) membranes. The membranes were blocked with 5% skimmed milk for 1 h at 25°C, and then incubated with primary antibodies (rabbit anti-PRDX1, 1:2000 dilution, rabbit anti-HSP90, 1:5000 dilution, Abcam, USA) at 4 °C overnight. Next, the membranes were incubated with secondary antibodies: 1:2000 dilution (Amersham Biosciences, USA) for 1h and visualized using enhanced chemiluminescence reagent (Bio-Rad, USA).
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7

Western Blot Analysis of Macrophage Signaling

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RAW264.7 macrophages were collected and lysed in ice-cold radioimmunoprecipitation assay buffer (Cell signaling, MA, USA) for 30 min. The protein contents were measured by Bradford protein assay (Bio-Rad, CA, USA). Total proteins (20 μg) were subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis and electro-transferred onto polyvinylidene difluoride membrane (Millipore, Darmstadt, Germany). The membranes were blocked with 5% nonfat-milk for 30 min at room temperature and incubated in a 1:1000 dilution of the primary antibody overnight at 4 °C. The primary antibodies used were phospho Nf-κB p-65 (p-p65), phospho-IκB-α (p- IκB-α), Cox-2, iNOS, and β-actin. All antibodies were purchased from Cell Signaling (USA). The membranes were washed three times with Tris-buffered saline plus Tween 20 for 10 min each time. After that, the membranes were incubated in a 1:2000 dilution of horseradish peroxidase-conjugated secondary antibody for 1 h at room temperature. The protein reactions were detected using enhanced chemiluminescence reagent (Bio-Rad, CA, USA) and chemi-luminator (Davinch-K, Seoul, Korea).
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8

Western Blot Analysis of Liver and Cell Proteins

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Cellular lysates were prepared from liver tissue, RAW264.7 and AML12 cells, respectively, by homogenizing tissues or cells in the lysis buffer (AR0101/0103; Boster Biological Technology Co. Ltd.). According to the manufacturer's protocol, the Pierce BCA protein assay kit (P0010; Beyotime) was used to detect protein concentration. After heat denaturation at 100°C for 10 min, 50 μg of liver tissue and cell lysates were into SDS‐PAGE and separated by electrophoresis, and then proteins were transferred to polyvinylidene fluoride membranes (Millipore). The membranes were first blocked with 5% skim milk and then incubated with the primary antibodies against MARCO, TLR4, TRIF, TNF‐a, IkB‐a, NF‐kB, Lamin B and GADPH, respectively at 4°C overnight or at room temperature for 2 h followed by incubation of the secondary antibodies conjugated with horseradish peroxidase at room temperature for 1–1.5 h. The bands were displayed with enhanced chemiluminescence reagent (Bio‐Rad). Then the protein band density was analysed by Image J or Image Lab analysis software and normalized to their respective controls.
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9

SDS-PAGE Western Blot Protocol

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Total cell lysates were generated with RIPA buffer (Sigma) containing proteinase and phosphatase inhibitors (Roche). Protein concentrations were measured using a bicinchoninic acid (BCA) protein assay kit (Thermo Scientific). Equal protein quantities were separated by SDS-PAGE (10% polyacrylamide), transferred to polyvinylidene difluoride membranes, incubated with primary and secondary antibodies, and visualized with an enhanced chemiluminescence reagent (Bio-Rad).
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10

Monitoring Rotavirus Protein Expression

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After the cells were seeded onto 24-well plates and allowed to adhere, Vero cells
were transfected with various plasmids for 6 h and were then washed three times
with PBS. The cells were then fixed with cold methanol for 10 min at room
temperature, washed three times with PBS and blocked for 1 h in 10% normal goat
serum (Abcam, Cambridge, UK) in PBS containing 0.5% Triton X-100 (Sigma–Aldrich,
St Louis, MO). The cells were then incubated with primary Abs against ARV18 (link) overnight at 4°C. Following three 5-min washes with PBST, the cells were
incubated with fluorescently labelled secondary Abs (Alexa Fluor; Abcam) for
60 min at room temperature.
Vero cells seeded onto six-well plates were harvested, and their cell lysates
were used for Western blot analysis to detect σA and σNS protein expression, as
described by Xie et al.18 (link) Proteins were visualized using an enhanced chemiluminescence reagent
(Bio-Rad, Hercules, CA) and were detected using a Bio-Rad ChemiDoc MP Imaging
System.
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