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7 protocols using concanavalin a (cona)

1

Measuring T-cell Proliferation from PBL

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PBL from patients and controls were isolated via centrifugation on a Ficoll-Hypaque gradient for 20 min, washed twice, and resuspended in Roswell Park Memorial Institute 1640 medium with HEPES, supplemented with 2 mM glutamine (Sigma-Aldrich Japan, Tokyo, Japan), 100 units/ml penicillin G (Sigma-Aldrich Japan, Tokyo, Japan), 100 μg/ml streptomycin sulfate, and 10% heat-inactivated human AB serum (Biowest, Nuaillé, France). Cells (1 × 105/well) were incubated in a total volume of 100 ml with the peptides or concanavalin A (4 μg/ml, Fujifilm Wako Pure Chemical Co., Osaka, Japan) in triplicates in 96-well round-bottom culture plates (Nunc, Roskilde, Denmark) at 37°C in a humidified atmosphere with 5% CO2. The cultures were incubated for 4 days and then pulsed with bromodeoxyuridine (BrdU) during the last 16 h of incubation. Cellular proliferation was assessed using a BrdU enzyme-linked immunosorbent assay kit (Cell Proliferation ELISA BrdU, Sigma), according to the manufacturer’s instructions. After co-culture with Brdu for 16 h, the BrdU labeling solution was removed and anti-BrdU antibody was added. The OD at 450 nm for BrdU was measured using a luminescence plate reader (ARVO X3, Perkin Elmer Japan, Yokohama, Japan). The results were expressed as stimulation index (SI: mean OD450nm in stimulated cultures / mean OD450 nm in unstimulated control cultures).
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2

Investigating the Immunomodulatory Effects of Traditional Japanese Herbal Medicines

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HET, JTT, and NYT were purchased from Tsumura & Co. (TJ; Tokyo, Japan), Kracie Pharma Ltd. (KR; Tokyo, Japan), and Kotaro Pharmaceutical Co., Ltd. (KO; Osaka, Japan) (Table 1). HET, JTT, and NYT (10 mg) were dissolved in 2 mL of Roswell Park Memorial Institute- (RPMI-) 1640 medium containing 10% fetal bovine serum (FBS), centrifuged at 2190xg for 10 min at 23°C, and then passed through a 0.22 μm membrane filter (ADVANTEC MFS, Inc., Tokyo, Japan). The nine Hozai solutions were stored at −20°C until use. FBS and RPMI-1640 medium were purchased from Sigma-Aldrich (St. Louis, MO, USA). Penicillin-streptomycin (10,000 U/mL penicillin and 10,000 μg/mL streptomycin) and 10x phosphate-buffered saline (PBS) were purchased from Gibco (Grand Island, NY, USA). Concanavalin A was purchased from Wako Pure Chemical Corporation (Osaka, Japan), and Cell Counting Kit-8 (CCK-8) was obtained from Dojindo Molecular Technologies (Kumamoto, Japan). Paraformaldehyde was purchased from Thermo Fisher Scientific (Waltham, MA, USA). PerCP-Cy™5.5 mouse anti-human CD4, allophycocyanin (APC) mouse anti-human CD8, APC mouse anti-human CD25, Human Foxp3 Buffer A, Human Foxp3 Buffer B, phycoerythrin (PE) mouse anti-human Foxp3, BD Cytometric Bead Assay (CBA) Flex Set, and Human TGF-β Single Plex Flex Set were purchased from BD Biosciences (Franklin Lakes, NJ, USA).
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3

Culturing and Transfecting Drosophila S2 Cells

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Drosophila S2 cells were cultured in Schneider's Insect Medium (Gibco) supplemented with 10% FCS and antibiotics at 25°C (Schneider, 1972 (link)). pUAST vectors with actin5Ce-Gal4 drivers were cotransfected using Effectene (Qiagen) according to the manufacturer's instructions, and harvested 36-48 h after transfection. For immunofluorescence or time-lapse imaging, cells were replated on coverslips or glass-bottom dishes coated with Concanavalin A (Wako) and were allowed to spread for 1-2 h (Rogers et al., 2002 (link)). For drug treatments, cells were treated with 1 µM Latrunculin A (Wako) or 10 µM Colchicine (Wako) for 1 h before imaging. For immunofluorescence, cells were fixed in 4% paraformaldehyde in phosphate-buffered saline (PBS) for 20 min at room temperature, permeabilized with 0.1% Triton X-100 in PBS (PBS-T) for 15 min, and blocked with 5% skimmed milk in Tris-buffered saline (TBS). Primary and secondary antibodies were diluted in the blocking solution. After each antibody incubation, the coverslips were washed three times with PBS-T. The cells were mounted in Vectashield mounting medium (Vector Labs).
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4

Sperm Oxygen Consumption Measurement

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The cellular oxygen consumption rate (OCR) was monitored in real time using a Seahorse Bioscience Extracellular Flux Analyzer (XF HS Mini, Agilent). For the flux analyzer, NaHCO3‐Free HTF medium was prepared according to the method used by Balbach et al25 Frozen bovine sperm was thawed as described above. After washing with NaHCO3‐Free HTF medium, the cell numbers were quantified and diluted to 3,000,000 sperm cells/180 µL of NaHCO3‐Free HTF medium. Assay plates were coated with concanavalin A (0.5 mg/mL, FUJIFILM Wako Chemicals) overnight the day before the assay. Each well was then seeded with 180 µL of NaHCO3‐Free HTF medium containing 3,000,000 sperm cells. The assay was performed in 6 min cycles of mix (3 min) and measurement (3 min) steps, as per the manufacturer's recommendations. Cells were treated as indicated with myristic acid (final concentration: 5, 50, or 500 nM) and/or etomoxir (final concentration: 40 nM).
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5

Measuring Sperm Mitochondrial Respiration

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Mature spermatozoa were collected from the cauda epididymis (from mice at age of 8–15 weeks) in Tyrode’s medium (Sigma) supplemented with 20 mM HEPES-NaOH (pH 7.5) (Gibco) and fatty acid–free BSA (Sigma) at 4 mg/ml. The spermatozoa (2 × 106 per well) were transferred to a 24-well plate that had been coated with concanavalin A (Fujifilm Wako Pure Chemical) at 0.5 mg/ml (20 μl per well), and the plate was centrifuged at 1200 × g for 2 min. The supernatant of each well was removed and replaced with 500 μl of Tyrode’s medium, and the OCR was measured in real time with an XF24 extracellular flux analyzer (Seahorse Bioscience). The spermatozoa were exposed to 2 μM oligomycin for 19 min, to 1 μM FCCP for 19 min, and then to rotenone and antimycin (1 μM each) for 22 min. Spermatozoa were finally collected from each well for measurement of protein content and normalization of OCR values.
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6

Lipid-based Membrane Preparation for Biophysical Studies

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Egg yolk phosphatidylcholine (EYPC) was kindly donated by NOF Co. (Tokyo, Japan). Allyl-α-D-mannopyranoside, cysteamine hydrochloride, 3-methylglutaric anhydride, Curdlan from Alcaligenes faecalis, ovalbumin (OVA), bovine serum albumin (BSA), p-xylene-bis-pyridinium bromide (DPX) and calcein were purchased from Sigma (St. Louis, MO, USA). Triton X-100, 1-Aminodecane, and pyranine were obtained from Tokyo Chemical Industries Ltd. (Tokyo, Japan). Concanavalin A and 4-(4,6-Dimethoxy-1,3,5-triazin-2-yl)-4-methyl morpholinium chloride (DMT-MM) were obtained from Wako Pure Chemical Industries Ltd. (Osaka, Japan), while 1,1′-Dioctadecyl-3,3,3′,3′-tetramethylindocarbocyanine perchlorate (DiI) was from Life Technologies.
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7

Measuring Sperm Mitochondrial Function

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Measurement of OCR of the spermatozoa was performed using a Seahorse XFp analyzer (Seahorse Bioscience, North Billerica, MA, USA) as previously described [8 (link)] with slight modifications. Mature spermatozoa were collected from the cauda epididymis in flushing holding medium (FHM, non-capacitation medium) [26 (link)]. The spermatozoa (2.5 × 106 per well) were transferred to an 8-well plate that had been coated with concanavalin A (Fujifilm Wako Pure Chemical) at 0.5 mg/ml (20
µl per well), and the plate was centrifuged at 1,200 × g for 2 min. The OCR was measured using a Seahorse XFp Cell Mito Stress Test Kit. The spermatozoa were exposed to
1.5 µM oligomycin for 19.8 min, to 2.0 µM FCCP for 19.8 min, and then to rotenone and antimycin (1.0 µM each) for 19.8 min. Spermatozoa
were collected from each well for measurement of protein content and normalization of OCR values. Basal respiration was the OCR before drug injection. ATP production was calculated as the
difference between the basal OCR and the OCR after oligomycin injection. Proton leak was the OCR after oligomycin injection. Maximal respiration was the OCR after FCCP injection. Spare
capacity is calculated as the difference between OCR after FCCP injection and basal respiration [27 (link)].
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