The largest database of trusted experimental protocols

3 3 diaminobenzidine (dab)

Manufactured by Thermo Fisher Scientific
Sourced in United States, Japan, China

DAB is a chromogenic substrate used in immunohistochemistry (IHC) and immunocytochemistry (ICC) applications. It produces a brown precipitate at the site of the target antigen, allowing for the visualization and localization of the antigen of interest in tissue sections or cell samples.

Automatically generated - may contain errors

142 protocols using 3 3 diaminobenzidine (dab)

1

Immunohistochemical Validation of Carcinoma

Check if the same lab product or an alternative is used in the 5 most similar protocols
After OTLS imaging, the samples were processed and paraffin embedded. A single H&E-stained slide was prepared from each tissue sample (en face sectioning near the imaged tissue surface), then scanned at 20x magnification to produce a whole-slide image (Aperio, Leica Biosystems). Immunohistochemical (IHC) staining for cytokeratin 5 (CK5) and cytokeratin 8 (CK8) was performed to confirm the presence of carcinoma used the following protocol: incubation of sections in primary antibodies at 4°C overnight, followed by an appropriate biotinylated secondary antibody (1:150), ABC reagent (Vector Laboratories), and DAB (Invitrogen). A genitourinary pathology fellow and a board certified genitourinary pathologist reviewed each case.
+ Open protocol
+ Expand
2

Immunohistochemical Analysis of Formalin-Fixed Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
Formalin-fixed, paraffin-embedded tissues were sectioned and stained with hematoxylin and eosin (H&E) using standard methods. The primary antibodies, concentration and specific pretreatments are summarized in Supplementary Table S1. Briefly, serial sections were incubated with the primary antibody overnight at 4 °C and then rinsed and stained using the ABC kit (Vector Laboratories, Burlingame, CA, USA) following the manufacturer’s instructions. Slides were developed in DAB developed in DAB (Invitrogen, Camarillo, CA, USA) and counterstained with hematoxylin. Quantitative IHC was performed on slide captures representing 4–10 representative regions per sample and percent positivity or H scores were calculated with the QuPath v0.2.0-m4 image analysis software [37 (link)].
+ Open protocol
+ Expand
3

Immunohistochemical Analysis of Tumor Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
Proteins in tumor tissues were also assessed by immunohistochemistry assay. Tissues were initially fixed and embedded. Antigen retrieval was completed in heated citrate buffer for 10 minutes. Ki‐67 (1:200), vimentin (1:200), cleaved caspase 3,9 (1:100), PTEN (1:100), and p‐AKT (1:50) were incubated overnight at 4°C. The corresponding secondary antibody was incubated for 1h. Finally, DAB (Invitrogen) was used for color development, and the slides were estimated by three independent pathologists individually.
+ Open protocol
+ Expand
4

Immunohistochemical Analysis of hERG1 and hERG1B

Check if the same lab product or an alternative is used in the 5 most similar protocols
Immunohistochemistry was performed as previously reported [17 (link)] using an anti-hERG1 monoclonal antibody directed against the S5-pore region (Dival Toscana Srl, Sesto Fiorentino, Italy) at 1:200 dilution. Immunohistochemistry for hERG1B was performed following the same protocol with the exception of permeabilization, carried out by adding Triton X-100 to the blocking solution. The antibody (purified polyclonal anti-hERG1B antibody, Dival Toscana Srl, Sesto Fiorentino, Italy) was used at a final dilution 1:1000. Slides were incubated overnight at 4°C and immunostaining was performed with a commercially available kit (PicTure Max kit and DAB, Invitrogen; Carlsbad CA, USA).
+ Open protocol
+ Expand
5

Immunohistochemical Analysis of Tissue Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
Paraffin-embedded tissues were incubated with AFP (1:100, Abcam, Cambridge, UK), Ki67 (1:200, Abcam, Cambridge, UK) and PCNA (1:200, Abcam, Cambridge, UK). Slides were dried, dewaxed and rehydrated. DAB (Invitrogen, Carlsbad, CA, USA) substrate chromogen solution was applied, followed by counterstaining with haematoxylin.
+ Open protocol
+ Expand
6

Immunohistochemical Analysis of Ovarian Tumor

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ovarian tumor tissues from mice were formalin-fixed and paraffin-embedded. After rehydration and antigen retrieval, the slides (thickness = 4 μm) were incubated with primary antibodies: anti-Ki-67, anti-Bip, anti-phos-S6, anti-phos-AKT and anti-VEGF. The staining was visualized using DAB (Invitrogen, CA). The slides were scanned by Motic (Warrendale, PA). The expression analysis of Ki67, Bip, phos-S6, phos-AKT and VEGF were extracted using the following Image-Pro software (Rockville, MD). Images of the areas of expression were selected for clarity from at least five fields for each IHC specimen. The positive cells were detected, quantified and averaged automatically in selected areas. Each group was measured in seven IHC slides.
+ Open protocol
+ Expand
7

Immunohistochemical Profiling of PDX Tumors

Check if the same lab product or an alternative is used in the 5 most similar protocols
Subcutaneous LuCaP PDX tumors were formalin fixed and paraffin embedded. Five-μm sections were cut and stained with hematoxylin and eosin (H&E) and results were compared with the originating tissues (as available). One-mm tissue cores from two different tumors of each PDX (33 lines) were punched in duplicates and embedded into tissue microarrays (TMA). TMA tissue sections were used for IHC analyses, which was standardized: primary antibodies at 4°C overnight (Table S1), followed by appropriate biotinylated secondary antibody (1:150), ABC reagent (Vector Laboratories), and DAB (Invitrogen). Mouse or rabbit normal IgG were used as negative controls, respectively. Immunoreactivity was typically assessed using a compositional scoring system - the multiplicand of each intensity level (“0” for no reaction product, “1” for faint and fine brown chromogen, and “2” for clear and coarse granular chromogen) by percentage of cells at each intensity. The final score was the sum of multiplicands. The distribution of final scores was grouped as “negligible” (score range: <3), “weak” (score range: 3–99), “moderate” (score range: 100–149) and “intense” (score range: 150~200) [21 (link)].
+ Open protocol
+ Expand
8

Quantification of Liver Inflammation

Check if the same lab product or an alternative is used in the 5 most similar protocols
We analyzed all tissue samples from in vivo experiments. Four μm-thick tissue sections from paraffin-embedded blocks were stained with hematoxylin and eosin (H&E). For immunohistochemistry, tissue sections were incubated in 0.01M citrate buffer (pH 6.0) at 90°C for 60 min, followed by blocking with normal rabbit serum (1:75, Abcam, Cambridge, UK) for 20 min. Subsequently, tissue sections were incubated with anti-F4/80 antibody (1:100, Abcam) and anti-Gr1 antibody (1:200, Abcam) for 2 h. Tissue sections were then incubated with biotinylated anti-rabbit IgE and avidin–biotin horse radish peroxidase complex (Vector Laboratories, Burlingame, CA, USA) for 2 h and stained with DAB (Invitrogen, Eugene, OR, USA) for 20 min. Stained tissues were visually inspected using a model Olympus BX51 microscope (Olympus, Tokyo, Japan) equipped with a CCD camera and computer-assisted image analysis with DP2-BSW (Olympus, Tokyo, Japan). The numbers of inflammatory foci, F4/80+ cells, and Gr1+ cells were counted in two liver sections of each mouse or 10 hepatocytes.
+ Open protocol
+ Expand
9

Immunohistochemical Evaluation of EAAT2/GLT1 Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols

For immunohistochemical examinations, 5 µm thick sections were taken from paraffin-embedded brain tissue samples and incubated overnight in a 56°C oven. Subsequently, deparaffinization with toluene (Merck Millipore, Darmstadt, Germany) and rehydration with graded series of ethanol (70-100%) were boiled in citrate buffer (pH 6, Invitrogen) for antigen recovery. The sections were then exposed to H2O (Abcam, Cambridge, USA) to remove endogenous peroxidase activity. In order to prevent nonspecific binding, the blocking antibody (Invitrogen) was used for 10 minutes. The incubated sections were incubated overnight at + 4°C in EAAT2 / GLT1 antibody (Novus Biologicals) prepared with antibody dilution solution (Invitrogen) at room temperature. Biotinylated secondary antibody (Invitrogen) against the species from which the primary antibody is produced is administered for 10 minutes. and finally treated with HRP-streptavidin (Invitrogen) for 10 minutes. Staining reactions were visualized using DAB (Invitrogen), then counterstained with hematoxylin. Sections were examined using a ×200 objective on a BX-51 Olympus microscope (Olympus, Tokyo, Japan) and photographed. EAAT2/GLT1 immunoreactivity were semi-quantitatively evaluated using a histological score (HSCORE) value, average score was used for statistical analysis, described previously.17 (link)
+ Open protocol
+ Expand
10

ELISPOT Assay for EV71 Peptide-Specific IFN-γ and IL-4 Responses

Check if the same lab product or an alternative is used in the 5 most similar protocols
Multiscreen plates (Millipore) were coated with anti-human IFN-γ antibody (2 µg/ml) or anti-human IL-4 antibody (5 µg/mL; all from BD). After washing and blocking with culture medium, duplications of 5×105 fresh PBMCs were added with concanavalin A (5 µg/mL; Sigma), inactivated EV71/E59 (50 µg/ml) or 5 µg/mL of VP1, VP2 or VP3 peptide mixture prepared from a series of 15-mer peptides with 10-mer overlapping to cover whole VP1 (1–295 aa), VP2 (1–254 aa) or VP3 (1–242 aa), respectively [20] (link), [24] (link). After 40 hours of incubation, the plates were washed and incubated with a biotinylated antibody against IFN-γ (1 µg/mL) or IL-4 (2 µg/mL) for 2 hours at 37°C. HRP-conjugated avidin was added and incubated for 1 hour at 37°C. The assays were developed with DAB (Invitrogen) and stopped with tap water. Data were analyzed using ImmunoSpot software (CTL) and presented as the number of spot-forming cells (SFCs)/106 PBMCs.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!