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13 protocols using apotox glo

1

Trem1-Mediated Neutrophil Apoptosis

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Spontaneous apoptosis of mature Trem1+/+ versus Trem1−/− neutrophils was assessed at 5 days post differentiation in SCF-containing medium and 8 h, 24 h, and 48 h later. Immediately upon removal from plates, neutrophils were washed in cold PBS and AnnexinV Binding Buffer and stained with FITC-conjugated AnnexinV (BD Pharmingen) according to the manufacturer's instructions. DAPI (Sigma-Aldrich) was added immediately prior to aquisition by flow cytometry. Only AnnexinV and DAPI double-positive cells (AnnexinV+ DAPI+) were considered in the analysis of apoptotic cells. For determination of TREM-1-mediated effects on apoptosis induction, 5 days differentiated neutrophils were stimulated in vitro in 96-well U-bottom plates at 2×105 cells/well in complete RPMI medium lacking SCF in the presence of 10 µg/ml plate-bound anti-TREM-1 mAb (MAB1187; R&D) or a respective isotype control (RTK2758, Biolegend) for 24 h. Since the relative stickiness of neutrophils activated by plate-bound anti-TREM-1 did not allow for removal from the plates and FACS-based analysis of AnnexinV+ DAPI+ cells without causing a substantial bias by the selective analysis of non-adherent cells, Caspase 3/7 activity was determined by the ApoTox-Glo assay (Promega) according to manufacturer's instructions.
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2

Measuring Oxidative Stress in Amyloid-beta Treated Cells

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The ROS assay was conducted in HT22 cells as described previously75 . The cells were cultured in 96-well plates. After 24 h of incubation at 37 °C in a humidified atmosphere of 5% CO2, the cells were treated with fresh medium containing Aβ1-42 (5 μM), with or without VA at three different concentrations (50, 100 and 200 μM), and the cells were incubated for an additional 24 h. The control cells received only DMEM. Following this, a 600-μM solution of DCFDA (20, 70-dichlorofluorescein diacetate) dissolved in DMSO/PBS was then added to each well, and the cells were incubated for 30 min. The plates were then read on an ApoTox-Glo (Promega) instrument at 488/530 nm.
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3

Quantifying Brain Cholesterol, GSH, and ROS

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The total cholesterol and free cholesterol levels in brain homogenates were quantified using an assay kit (ab65390, Abcam) according to the manufacturer's approved guidelines.
The glutathione (GSH) levels and GSH/oxidized GSH (GSSG) ratio were measured with a fluorometric GSH assay kit (BioVision Inc., Milpitas, CA, USA; cat. no. K264–100), according to the company's product protocol.
ROS levels were examined as previously described [52 (link)]. Briefly, the animal's brain homogenates were diluted in ice-cold Locke's buffer (1 : 20) to attain a final concentration solution of 5.0 mg/tissue/ml. To attain the fluorescence, 1 ml solution (Locke's buffer, pH 7.4, and 0.2 ml brain homogenate) was incubated with 10 ml of 5 mM dichlorodihydrofluorescein diacetate (DCFH-DA) (Santa Cruz Biotechnology, CAS #4091-99-0) for 30 min resulting in the oxidation of DCFH-DA into fluorescent product dichlorofluorescein (DCF).
The fluorescence intensities of assays were measured (cholesterol: Ex/Em = 535/587nm, GSH: Ex/Em = 340/420nm, and ROS: Ex/Em = 484/530nm) with a 96-well fluorescence microplate reader ApoTox-Glo™ (Triplex Assay, Promega, Madison, WI, USA).
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4

Evaluating Cellular Responses to Tipifarnib

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HPAECs and HPASMCs proliferation was evaluated using bromodeoxyuridine (BrdU) assay (Millipore), while cell viability and caspase activation were assessed using the kit ApoTox-Glo™ (Promega). Metabolic activity (NADH/NADPH levels) was measured in CellTiter 96® Aqueous One Solution Cell Proliferation Assay System (Promega, USA). The levels of cleaved caspase 3 in tipifarnib-treated cells and mouse lungs were analysed by western blotting. Apoptotic DNA fragmentation was studied with TACS 2 TdT-DAB In Situ Apoptosis Detection Kit (Trevigen, 4810-30K).
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5

Functionalized gold nanoparticle synthesis

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1-Ethyl-3-[3-(dimethylamino) propylcarbodiimide (EDC), sodium citrate, hydrogen tetrachloroaurate (HAuCl4), cystamine dihydrochloride, sodium cyanoborohydride (NaBH3CN), Dulbecco’s modified Eagles’s medium/nutrient mixture F-12 Ham (DMEM/F12), trypsin-ethylenediaminetetraacetic acid (EDTA) solution 10x, and fetal calf serum (FCS), and DAPI for nucleic acid staining were obtained from Sigma-Aldrich (St. Louis, MO). ARPE-19 (Retinal pigment epithelial)(ATCCR® CRL-2302), NIH 3T3 (ATCCR® CRL-1658 ) and CHO(CCL-61) cells were purchased from American Type Culture Collection (Manassas, VA). Dithiothreitol (DTT) was obtained from Duchefa Biochemie (Haarlem, Netherlands). HiLyte-Fluor 647 amine was purchased from AnaSpec (San Jose, CA). Sodium hyaluronate having a molecular weight of 10,000 Da was obtained from Lifecore (Chaska, MN). The Apo Tox-Glo and ROS -Glo H2O2 assay kits were purchased from Promega Biosciences (San Luis Obispo, CA). All chemicals and reagents were of analytical grade.
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6

Cytotoxicity and Caspase Assay Protocol

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ApoTox-Glo (Promega) Assay to measure cytotoxicity and caspase activity was done according to the manufacturer's protocol. Live and dead cell protease activities were measured using fluorogenic cell-permeant (live) and cell-impermeant (dead) peptide substrate. Fluorescence was measured at 400Ex/505Em for viability and 485Ex/520Em for Cytotoxicity. Caspase 3/7 activity was measured by luminescence after adding Caspase-Glo 3/7 reagent to all wells.
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7

Cell Death in Influenza-infected A549 Cells

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Cell death in influenza virus-infected ±LOC14-treated A549 cells was measured using the Apo Tox-Glo assay (Promega, Madison, WI, USA) dead cell protease substrate as described in Anathy et al., 2012 [30 (link)].
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8

Investigating Neuroprotective Effects of Osmotin

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Mouse hippocampal neuronal HT22 cells were cultured in 96-well plates. Each well contained a final volume of 200 μl of DMEM medium containing 10% FBS and 1% penicillin/streptomycin. After a 48-h incubation at 37 °C in a humidified 5% CO2 incubator, the cells were treated with fresh media containing glutamate (100 μM), glutamate plus osmotin (100+0.2 μM), glutamate plus LY294002 (100+20 μM) or glutamate plus LY294002 plus osmotin (100+20+0.2 μM) for a total of 20 min. The PI3K inhibitor LY294002 was added to the cells 5 min before the glutamate and osmotin treatments. A 600 μM solution of DCFDA (2′,7′-dichlorofluorescein diacetate) dissolved in DMSO/PBS was added to each well and incubated for 30 min. The plates were then read in ApoTox-Glo (Promega) at 488/530 nm.
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9

Apoptosis Measurement in Huh7 Cells

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Huh7 cells were analysed for apoptosis using ApoTox Glo (Promega) according to the manufacturer's instructions. Briefly, the assay provides a luminogenic substrate, which when cleaved by caspase‐3/7 yields quantifiable luminescence to indicate the presence of apoptotic signalling.
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10

ROS Assay in SH-SY5Y Cells with Aβ1-42 and Anthocyanin/An-NPs

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The ROS assay in SH-SY5Y cells were conducted as described previously [70 (link)]. Briefly, the cells were cultured in 96-well plates at a density of 1 × 104 cells per well in 100 µl of the Dulbecco’s modified Eagle’s medium (DMEM from Gibco, life technologies, USA). After 24 h, the medium was replaced with fresh medium containing Aβ1–42 (5 µM), with three different concentrations (50, 100 and 200 µg/ml) of anthocyanin or An-NPs in combination with Aβ1–42 (5 µM). The control cells received only the DMEM medium. Following this, A 600-µM solution of DCFDA (20, 70-dichlorofluorescein diacetate) dissolved in DMSO/PBS was then added to each well, and the cells were incubated for 30 min. The plates were then read on an ApoTox-Glo (Promega) instrument at 488/530 nm.
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