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13 protocols using lsm 510 meta

1

Visualizing Perinuclear Ca2+ Stores in Cardiomyocytes

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Perinuclear Ca2+ stores were visualized in cardiomyocytes
loaded with the low affinity Ca2+ indicator Mag-Fluo-4/AM using a
confocal imaging system (Zeiss LSM 510 Meta or Olympus Fluoview 1000). The
optical slice thickness was ≤0.76 μm. 2D images at a central
depth of the nuclei were collected. The longitudinal axis was drawn through the
middle of the nuclei and tubular structures (longer than 1 µm) were
counted along the half of the nuclear envelope, which contained more
invaginations. Rapid application of caffeine (20 mM) occurred in the presence of
20 mM BDM by wash-in of caffeine for 3 s. Caffeine experiments were conducted in
cardiomyocytes isolated from C57BL/6 mice that did not undergo any surgery.
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2

Immunofluorescence Staining Protocol for Cells

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For immunofluorescence (IF), HeLa cells were grown on 12-mm coverslips at an initial density of 2.5 × 105 per well on 6-well plates. At 48 h after transfection, cells were fixed with 4% PFA in phosphate-buffered saline (PBS) for 15 min at room temperature (RT), permeabilized with 0.5% Triton X-100 in PBS (v/v) for 5 min at 4 °C, and blocked with 1% FBS in PBS (for 30 min at RT). All wash steps were done with PBS.
Primary antibodies were used for overnight incubation at 4 °C and secondary antibodies for 60 min at RT. DNA was stained with DAPI (4,6-diamidino-2-phenylindole, 0.2 μg/mL in mounting medium with Mowiol and DABCO). For imaging, the confocal microscopes LSM 510 META with the FCS system and Olympus FluoView FV1000 were used. Any brightness and contrast adjustments were performed in Adobe Photoshop, Zen 2007 (Carl Zeiss, Oberkochen, Germany) or ImageJ [64 (link)].
The fibroblasts were seeded on 12-mm coverslips to obtain 50% confluence, then fixed after 24 h and stained as described for HeLa cells. For imaging, the confocal microscope Leica SP8 (Leica Camera AG, Wetzlar, Germany) with LasX software was used. Z-stacks were presented as maximum intensity projection images.
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3

Dual-Labeling of RNA and Proteins in Drosophila

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RNA FISH combined with immunostaining was carried out according to the previously described procedure [20 (link)] with modifications. After fixation, ovaries or dechorionized embryos were incubated in PBS containing 50 ug/ml proteinase K for 6 or 2 min, respectively. Proteinase K treatment was omitted in case of further staining for cytoplasmic proteins in the ovaries. Digoxigenin (DIG)-labeled antisense HeT-A riboprobe containing a fragment of the ORF (nucleotides 4330–4690 of GenBank sequence DMU06920) was used. The specificity of this probe was previously confirmed by Northern blotting and in situ hybridization with polytene chromosomes of salivary glands [19 (link), 26 (link)]. To amplify hybridization signal, we incubated the sample with anti-DIG- fluorescein (FITC) antibodies (Roche), followed by incubation with anti-FITC Alexa Fluor 488 antibodies (Life Technologies). Blocking solution was supplemented with 3% BSA before immunostaining. Samples were mounted in Vectashield Antifade Mounting Medium with DAPI (Vector Laboratories). Images were captured using Zeiss LSM 510 Meta or Olympus FV10i confocal microscopes and analyzed using ImageJ and Adobe Photoshop.
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4

Uptake and Quantification of PCP-Mn-DTA Nanosystem by B16F10 Cells

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The endocytosis of the B16F10 cells on the PCP-Mn-DTA nanosystem was observed by CLSM and quantitatively analyzed by FCM. On one hand, the B16F10 cells seeded on the confocal microscope dish were treated with PBS, FITC-labelled GOx (GOx-FITC, 10 mU/mL) and PCP-Mn-DTA@GOx-FITC@1-MT at pH 7.4 and 6.8 for 4 and 12 h. The cells were subsequently fixed with 4% paraformaldehyde, permeabilized with 0.5% TritonX-100, followed by staining with ActinRed 555 and 4’,6-diamidino-2-phenylindole (DAPI). CLSM (LSM 510 META Olympus) and CellSens Dimension software were employed to study the efficiency of uptake by the B16F10 cells. On the other hand, the B16F10 cells treated with the various systems were washed with PBS. The cells were subsequently centrifuged (800 g × 10 min) at 4 °C and collected. Finally, they were resuspended in the cell binding solution (300 μL) and analyzed by FCM (FACS Calibur and Celesta, BD, Biosciences) and FlowJo_V10 software.
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5

Simultaneous Imaging of Calcium Dynamics

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Simultaneous imaging of nucleoplasmic and cytoplasmic CaTs occurred in
cardiomyocytes loaded with Fluo-4 (Molecular Probes, Leiden, The Netherlands)
using a confocal imaging system (Zeiss LSM 510 Meta or Olympus Fluoview 1000) as
described previously.8 (link)Cardiomyocytes were field-stimulated via two platinum electrodes. Isoprenaline
(30 nM) and angiotensin II (ATII, 100 nM) were used to investigate the effects
of β-adrenergic stimulation and IP3 signaling, respectively.
Cytoplasmic and nucleoplasmic fluorescence signals were transformed into
calibrated [Ca2+] using the previously described method.8 (link)
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6

Biodistribution of Nanoparticle Delivery

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Liposomes averagely sized 95 ± 25 nm were loaded with fluorescent dyes, rare earths or nutritional agents. The biodistribution of nanoparticles (NPs) and subsequent release rates of the compounds at the biological site were demonstrated on Cherry Tomato (Solanum Lycopersicum var. cerasiforme) by both qualitative and quantitative approaches. Samples were taken from different parts of the plant at predetermined time intervals post application. Visualization of biodistribution and capacity to penetrate the cell wall was performed using Confocal Laser Scanning Microscopy (Olympus LSM 510 Meta, Tokyo, Japan). Quantification of uptake extent was determined by Inductively-Coupled-Plasma Optical-Emission-Spectrometry (ICP-OES, Agilent 5100VDV, Santa-Clara, USA).
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7

Multimodal Imaging Techniques for Biological Samples

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Cryosections were imaged on a Nikon Eclipse Ti inverted microscope with Andor CCD camera or an Olympus FV3000 confocal laser scanning microscope. Vibratome sections were imaged using either a Zeiss LSM 810 confocal microscope, Zeiss LSM 510 meta confocal microscope, or Olympus FV3000 confocal microscope. Embryos cleared with iDISCO were either imaged on a Zeiss LSM 510 meta confocal laser scanning microscope with a 10x/0.45 Plan Apochromat objective or a LaVision Biotec light sheet microscope (Ultramicroscope II) equipped with a 2x/0.5 objective lens (MVPLAPO 2x) with 6mm working distance dipping cap, a sCMOS camera (Andor Neo), and Imspector Microscope controller software.
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8

Multimodal Imaging Techniques for Biological Samples

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Cryosections were imaged on a Nikon Eclipse Ti inverted microscope with Andor CCD camera or an Olympus FV3000 confocal laser scanning microscope. Vibratome sections were imaged using either a Zeiss LSM 810 confocal microscope, Zeiss LSM 510 meta confocal microscope, or Olympus FV3000 confocal microscope. Embryos cleared with iDISCO were either imaged on a Zeiss LSM 510 meta confocal laser scanning microscope with a 10x/0.45 Plan Apochromat objective or a LaVision Biotec light sheet microscope (Ultramicroscope II) equipped with a 2x/0.5 objective lens (MVPLAPO 2x) with 6mm working distance dipping cap, a sCMOS camera (Andor Neo), and Imspector Microscope controller software.
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9

Nanoparticle Uptake and Localization Visualization

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TEM and confocal laser scanning microscopy (CLSM) were employed to reveal the distributions of nanoparticles in cells. Cell seeding procedure was the same as above. Cells were co-cultured with HMSNs and HMSNs–S–S–CPA–CytC–LA (0.136 mg/mL) for 12 h. Cells culturing in tissue culture polystyrene (TCPS) without adding any nanoparticles was used as control. TEM samples were prepared as previous reports [24 (link), 25 (link)]. Cells were collected and fixed with glutaraldehyde (2% w/v) and paraformaldehyde (2% w/v) at 4°C for 2 h. Then, the samples were immersed into osmic acid (2%) for 15 min and stained with a uranyl acetate solution for another 15 min. The samples were dehydrated in a graded series of ethanol, followed by incubated with a mixture solution of dehydrated ethanol and Spurr's medium (1:1, v/v) for another 1 h. The samples were dried, cut into ultrathin sections and stained with uranyl acetate on the grid for 5 min. The images were recorded by a TEM microscope. For CLSM imaging, HMSNs@FITC and HMSNs–S–S–CPA–CytC–LA@FITC (0.136 mg/mL) were co-cultured with HepG2 cells for 6, 12 and 24 h, respectively. Next, cells were fixed with para-formaldehyde (4% w/v) at 4°C for 40 min. After that, the treated cells were stained by DAPI (20 µg/mL) and then washed 3 times with PBS. Fluorescence images of cells were acquired by CLSM (LSM 510 META; Olympus, Japan).
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10

Fluorescent and Confocal Microscopy Imaging

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Fluorescent images were obtained using a fluorescent microscope (BX-51, Olympus) with the 10× objective. Confocal microscope images of various brain regions were generated using either the 63× objective and the Zeiss LSM 510 Meta or the 2× objective on the Olympus BX61. Image processing was done using the LSM 510 imaging software (Zeiss) or Slidebook 4.2. Merged images were created using Photoshop CS4 with the photomerge reposition feature.
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