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5 protocols using pe conjugated ki 67

1

Proliferation Assay of Naïve CD4+ T Cells

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For the proliferation assay, naïve CD4+ T cells were purified by MACS beads (MiltenyiBiotec) and were labeled with CFSE (eBioscience) at 37°C water bath for 15 min. Labelled cells were stimulated in 96 well culture plates with plate bound anti-CD3 (5 μg/mL) and anti-CD-28 (1 μg/mL) in the presence of DMSO or BJ-3105 in Th1 and Th17 differentiation conditions: Th0 (anti-CD3/CD28 with no cytokines), Th1 (IL-12, 10 ng/mL plus anti-IL-4, 5 μg/mL), Th17 (IL-6, 10 ng/mL, TGF-β, 1 ng/ml plus anti-INF-γ and anti-IL-4, each at 5 μg/mL). After 72 h of culture, cell proliferation was assessed by CFSE dilution, using flow cytometry. For 5-bromo-2'-deoxyuridine (BrdU) labeling, naive CD4+ T cells from spleens and lymph nodes were isolated by immunomagnetic positive selection from 6–10 weeks C57BL/6 mice. The cells were cultured under Th1 differentiation condition with BrdU (10 μM). After 72 h of culture, cells were stained with APC-conjugated BrdU as per manufacturer’s protocols (BD Biosciences) in BrdU kit and cell proliferation was assessed by using flow cytometry. For Ki-67 detection, naive CD4+ T cells were isolated and cultured under Th1 differentiation condition and after 72 h of culture; cells were stained with PE-conjugated Ki-67 (Biolegend). Cell proliferation was assessed by using flow cytometry.
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2

ECFC Proliferation Assay by Flow Cytometry

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ECFCs proliferation was assessed through % expression of cell nuclear antigen Ki67 by flowcytometry. We investigated Ki67 expression in ECFCs of both CAD and control subjects at passage 3. Briefly, 1 × 105 cells/well were seeded on a 6 well plate and incubated for 72 h at 37 °C, 5% CO2. After incubation, cells were harvested and permeabilized by treating with pre-chilled 70% ethanol and incubated for 1 h at − 20 °C. Thereafter, cells were resuspended into staining buffer and stained with PE conjugated Ki67 (Cat. 350,503, BioLegend) antibody and incubated for 1 h at room temperature. Cells were acquired in FACS LSR-II (Becton Dickinson). The unstained cell sample was used as negative control and Ki67-PE signal in logarithmic mode was recorded and data expressed as % expression of Ki67 in histogram.
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3

Immunophenotyping of Fixed PBMCs

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Surface-stained PBMCs were fixed and permeabilized with a FOXP3 Staining Set (eBioscience, San Diego, CA, USA) and then stained with PE conjugated Ki-67, Alexa Fluor 488 or PE conjugated Foxp3 (all from Biolegend, San Diego, CA).
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Multiparametric Flow Cytometry of PBMC

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We isolated peripheral blood mononuclear cells (PBMC) using density-gradient centrifugation on Ficoll-Paque with single cell suspensions stained with the following antibodies: Alexa Fluor 700-conjugated CD4, V450-conjugated CD45RA and CCR7, PE-conjugated CD4 and CCR6, PE-Cy7-conjugated PD-1, CXCR3, and IgD, Alexa Fluor 647-conjugated CXCR5 and IL-21, fluorescein isothiocyanate (FITC)-conjugated CD62L, APC-Cy7-conjugated CD19, APC-H7-conjugated CD3, PE-Cy5-conjugated CD38, streptavidin-conjugated APC-Cy7 (all from BD PharMingen), and FITC-conjugated ICOS, PE-conjuaged Bcl6, and PE-Cy5 conjugated TCRβ (from eBioscience), and PE-conjugated Ki-67 (from BioLegend). Stained cells were analyzed by multiparameter flow cytometry (LSRFortessa or LSR II, BD), with exclusion of doublets by forward and side scatter, using FlowJo software (Tree Star).
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5

Naive T Cell Proliferation Assays

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MACS- purified naïve CD4+ T cell isolated from spleen and lymph nodes of C57BL/6 mice were labelled with 5, 6-carboxyfluorescein diacetate N-succinimidyl ester (CFSE, eBioscience). Labelled cells were stimulated with plate bound anti-CD3 (5 μg/mL) and anti-CD-28 (1 μg/mL) in the presence of DMSO or NTG-A-009 in Th1 conditions (IL-12, 10 ng/mL plus anti-IL-4, 5 μg/mL) and Th17 differentiation conditions (IL-6, 10 ng/mL, TGF-β, 1 ng/ml plus anti-INF-γ and anti-IL-4, each at 5 μg/mL). Proliferation of cell was assessed after 72 h using flow cytometry. For Ki67 detection, isolated naïve CD4+ T cells were cultured under Th1 differentiation condition and stained with PE conjugated Ki-67 (Biolegend) after 72 h of culture. Proliferation of cell was assessed by flow cytometry. For the labeling of 5-bromo-2′-deoxyuridine (BrdU), naïve CD4+ T cells were isolated from spleen and lymph nodes from 8–12 weeks C57BL/6 mice and the cells were cultured under Th1 differentiation condition along with BrdU (10 μM). After 72 h of incubation, cells were stained with APC-conjugated BrdU as accordance to manufacturer’s protocol (BD Bio-sciences) in BrdU kit and proliferation of cells was assessed using flow cytometry.
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