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325 protocols using avance 3 hd

1

NMR Spectroscopic Analysis of Organic Compounds

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Typical 1H and 13C spectra were recorded on a Bruker Avance III HD (1H: 300 MHz, 13C 100 MHz) or a Bruker Avance III HD (1H: 500 MHz) spectrometers at room temperature using d-chloroform or d6-dimethyl sulfoxide as solvents. NMR irradiation experiments were performed on Varian Mercury Plus (1H: 400 MHz) at room temperature using CDCl3 as a solvent, with Thorlabs M365F1 (365 nm, 4.1 mW) and M455F1 (455 nm, 24.5 mW) LEDs coupled to a 0.6 mm optical fiber, which was introduced to the NMR tube inside the spectrometer. 1H and 13C NMR chemical shifts were reported in δ units (ppm) relative to the residual solvent signal of CDCl3 (1H NMR, δ 7.26 ppm; 13C NMR, δ 77.0 ppm) or d6-DMSO (1H NMR, δ 2.50 ppm; 13C NMR, δ 39.5 ppm). The splitting pattern of peaks was designated as follows: s (singlet), d (doublet), t (triplet), p (quintet), m (multiplet).
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2

NMR Characterization of PAOx and PAOx-Glc

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NMR measurements were carried out on a 400 MHz Bruker Avance III HD spectrometer (Bruker Biospin GmbH, Rheinstetten, Germany) for PAOx. Data for PAOx-Glc were measured on a 500 MHz Bruker Avance III HD spectrometer, equipped with a TCI cryoprobe, using standard pulse sequences as implemented in Bruker Topspin ver. 3.6.1. Chemical shifts were referenced to the residual solvent signals of CDCl3 (δH 7.26/δC 77.16) and MeOH-d3 (δH 3.31/δC 49.0), respectively.
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3

Carbon NMR Spectroscopy of Flavonoids

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Carbon magnetic resonance spectra were recorded using an internal deuterium lock (at 298 K unless stated otherwise) on Bruker DPX (101 MHz), Bruker Avance III HD (101 MHz) and Bruker Avance III HD (126 MHz) spectrometers with broadband proton decoupling. 1024 scans (NS) were acquired using pulse sequence 'zgpg30′, with waltz16 1H decoupling. 90 degree 13C pulse set to 21 W (PLW1) for 9.5 μs (P1). 209,786 points (TD) were digitised over 3.02 s (AQ), relaxation delay set to 2 s (D1). Sweep width was 276 ppm (SW), with an irradiation frequency of 110 PPM (O1P). Carbon spectra assignments are supported by DEPT editing, 1H-13C HSQC or 1H-13C HMBC spectra, or by analogy. Chemical shifts (δC) are quoted in ppm to the nearest 0.1 ppm and are referenced to the deuterated solvent peak. Data are reported as: chemical shift, number of nuclei, multiplicity, coupling constants and assignment. Magnetic resonance spectra were processed using TopSpin (Bruker). An aryl, quaternary, or two or more possible assignments were given when signals could not be distinguished by any means. Standard flavone numbering was followed.
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4

NMR Characterization of Chemical Compounds

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Proton magnetic resonance spectra were recorded using an internal deuterium lock (at 298 K unless stated otherwise) on Bruker DPX (400 MHz; 1H-13C DUL probe), Bruker Avance III HD (400 MHz; Smart probe), Bruker Avance III HD (500 MHz; Smart probe) and Bruker Avance III HD 62 (500 MHz; DCH Cryoprobe) spectrometers. Pulse sequence used zg30 – PLW1 = 14 W, P1 = 10.5 μs, SW = 20 ppm, TD = 64 K, AQ = 3.28 s, D1 = 1 s, NS = 16. Proton assignments are supported by 1H-1H COSY, 1H-13C HSQC or 1H-13C HMBC spectra, or by analogy. Chemical shifts (δH) are quoted in ppm to the nearest 0.01 ppm and are referenced to the residual non-deuterated solvent peak. Discernible coupling constants for mutually coupled protons are reported as measured values in Hertz, rounded to the nearest 0.1 Hz. Data are reported as: chemical shift, multiplicity (br, broad; s, singlet; d, doublet; t, triplet; q, quartet; m, multiplet; or a combination thereof), number of nuclei, coupling constants and assignment.
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5

Nuclear Magnetic Resonance Characterization

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Commercially available high-grade reagents and solvents were used without further purification. NMR spectra were recorded on a 11.7 T Bruker (AVANCE III HD) spectrometer (1H-NMR: 500 MHz; 13C-NMR: 125 MHz, 19F-NMR: 470.7 MHz) or a 7.0 T Bruker (AVANCE III HD) spectrometer (1H-NMR: 300 MHz; 13C-NMR: 75 MHz, 19F-NMR: 282 MHz). Chemical shifts are reported in parts per million (δ, ppm). 1H-NMR chemical shifts were referenced to the residual CDCl3 (δ = 7.26 ppm) or MeOD (δ = 3.31 ppm). In 13C-NMR measurements, the signal of CDCl3 (δ = 77.0 ppm) was used as reference. 19F-NMR chemical shifts were referenced to CCl3F as 0 ppm. High-resolution mass spectra were obtained with an LC-HRMS mass spectrometer operated in the positive electrospray ionization (ESI) mode. For information on the materials and the log P determination protocol, see Supplementary Methods.
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6

Nuclear Magnetic Resonance Spectroscopy Protocol

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1H NMR spectra were acquired in 5 mm NMR tubes at 298 K on a Bruker Avance III (1H = 600 MHz) or a Bruker Avance III HD (1H = 500 MHz). The solvent was 10% D2O/90% H2O. 1H NMR chemical shifts were referenced to the residual solvent peak (δ = 4.79 ppm). WATERGATE or presaturation water suppression techniques were used. 13C J-modulated spin-echo NMR spectra were acquired in 5 mm NMR tubes at 298 K on a Bruker Avance III HD (13C = 126 MHz) with 2048 scans. The [15N-1H] HSQC NMR spectrum was recorded on a Bruker Avance II (1H = 700 MHz, 15N = 70.95 MHz) at 298 K. The spectrum was recorded using 2D HSQC correlation via double INEPT transfer optimized for 1J(N,H) = 73 Hz (τ = 1/2 J). 16 transients were acquired. All data processing was carried out using MestReNova software.
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7

Comprehensive Spectroscopic Characterization

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Ultraviolet (UV) spectrum was recorded on Shimadzu UV-1800 spectrophotometer, 1mg of sample was dissolved in 10 mL dimethylsulfoxide (DMSO) and the spectra were recorded at 200–400 nm range. Fourier transform infrared spectrum (FTIR) was determined by Bruker® Optik GmbH, Germany in the range 400–4000 cm−1 by using methanol as the medium for the preparation of the sample. 1H NMR and 13C NMR spectra were measured in methanol on Bruker® Avance III HD (400 MHz) spectrometer, Germany, equipped with a 5mm broad-band multinuclear (PABBO) probe. The chemical shifts were reported in parts per million (ppm) relative to TMS (δ0.0) used as internal standard. Two-dimensional (2D) NMR analyses, 1H-1H Correlation Spectroscopy (COSY), heteronuclear single quantum coherence (HSQC) and 1H-13C heteronuclear Multiple Bond Correlation Spectroscopy (HMBC) were also carried out on Bruker® Avance III HD (400 MHz) spectrometer. All spectroscopic measurements were performed at Drug Discovery and Development Research Center at Faculty of Pharmacy, Ain Shams University, Abbassia, Cairo, Egypt.
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8

Physicochemical Characterization of MOPs

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Ultraviolet-visible (UV-Vis) absorption data were acquired on a UV-1800 (Shimadzu) spectrophotometer in spectroscopic grade solvents without further purification. NMR measurements were performed in standard 5 mm NMR tubes at 300 K. All the data were acquired on a Bruker AVANCE III HD 500 and 700 MHz NMR spectrometer. Solid-state 13C CP/MAS NMR spectra of PH-MOP and Oxz-MOP were recorded on a 400 MHz solid state NMR spectrometer (AVANCE III HD, Bruker, Germany) at KBSI Western Seoul center. Two-dimensional ROE spectra were measured with a spectral width of 8 kHz in 2 K data points using 16 scans for each of the 512 t1 increments with 300 ms as a mixing time. Cyclic voltammetry (CV) was performed using an Epsilon electrochemical analyzer (EC Epsilon, BASi), and carried out in a three electrodes system, with Ag/Ag+ as the reference electrode, Pt foil as the counter electrode, and the platinum working electrode, with a scan rate of 100 mV s−1. For the photo-mediated oxidative cyclization reaction, pyridinium acylhydrazones were UV-irradiated with 342 nm using the Lumatec Superlite 410. Scanning electron microscopy (SEM) images were captured on a JEOL 7800 field emission SEM (FE-SEM) operated at an accelerating voltage of 15 kV. FT-IR spectra were recorded using a spectrometer Vertex 70 (Bruker Optic, Billerica, MA, USA), equipped with a diamond ATR unit.
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9

NMR Characterization of Compounds

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1H NMR, 13C NMR, 1H-1H correlation spectroscopy (COSY), 1H-13C heteronuclear single quantum correlation (HSQC), 1H-13C heteronuclear single quantum correlation - total correlation spectroscopy (HSQC-TOCSY), and 1H-13C heteronuclear multiple bond correlation (HMBC) experiments were measured on Bruker 500-MHz Avance III HD and 700-MHz Avance III HD NMR spectrometers (Bruker Biospin, Germany). A 5-mm proton-optimized triple resonance NMR ‘inverse’ (TCI) cryoprobe (500 MHz) or a 1.7-mm TCI cryoprobe (700 MHz) at a probe temperature of 298 K was used. Samples were prepared in methanol-d3, and 1H and 13C chemical shifts (δ) were referenced to the residual solvent signals of methanol-d3 at δH 3.31 and δC 49.15, respectively.
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10

NMR Characterization of Oligopeptides

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Variable-temperature NMR spectra were recorded on a 500 MHz NMR spectrometer Bruker Avance II™ HD (1H at 500 MHz, 13C at 126 MHz) in DMF-d7 and CD3OH for solutions of approximately 1 mg of the peptide in 600 μL of the solvent. Proton spectra were referenced to the solvent signals δ = 2.75 and δ = 3.31, respectively. Proton spectra of CD3OH solutions were recorded with presaturation of the intense OH signal. The characterization spectra of the prepared oligopeptides were recorded on a 500 MHz NMR spectrometer Bruker Avance III™ HD (1H at 500 MHz, 13C at 126 MHz) or on a 600 MHz NMR spectrometer Bruker Avance III™ HD (1H at 600 MHz, 13C at 151 MHz) in DMSO-d6 (δ = 2.50 (1H) and δ = 39.70 (13C)), DMF-d7 (δ = 2.75 (1H) and δ = 29.76 (13C)) or methanol-d4 (δ = 3.31 (1H) and δ = 49.00 (13C)). Complete signal assignment is based on homo- and heteronuclear correlation experiments COSY, TOCSY, ROESY, HSQC and HMBC. The solvents used were purchased from Eurisotop.
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