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7 protocols using cdc27

1

Immunoblotting Antibody Optimization Protocol

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Immunoblotting was performed as previously described [42 (link)], except that a ChemiDoc Touch imaging system (Bio-Rad, Hercules, CA, USA) was used to detect the signals. The following antibodies were obtained from the indicated sources and used at the indicated concentrations: monoclonal antibodies against beta-actin (Sigma-Aldrich; 0.2 µg/ml), FLAG (Sigma-Aldrich; 1 µg/ml), BUB3 (BD Biosciences, Franklin Lakes, NJ, USA; 0.25 µg/ml), CDC27 (BD Biosciences; 0.125 µg/ml), cleaved PARP1(Asp214) (BD Biosciences; 0.2 µg/ml), CDH1 (Thermo Scientific; 1 µg/ml), CDC20 (Santa Cruz Biotechnology, Santa Cruz, CA, USA; 0.2 µg/ml), MAD1 (Santa Cruz Biotechnology; 0.2 µg/ml),TRIP13 (Santa Cruz Biotechnology; 0.2 µg/ml), APC4 (Abcam, Cambridge, UK; 0.1 µg/ml), polyclonal antibodies against phosphor-histone H3Ser10 (Santa Cruz Biotechnology; 0.1 µg/ml), BUBR1 (Bethyl Laboratories, Montgomery, TX, USA; 0.2 µg/ml), MAD2 [43 (link)], and p31comet [44 (link)]. Antibodies against cyclin B1 (1 µg/ml) were gifts from Julian Gannon (Cancer Research UK). Immunoprecipitation of MAD2 or CDC20 was performed as previously described [43 (link)]. Antibody against APC4 for immunoprecipitation was prepared by immunizing rabbits with an APC4 peptide (CIVIKVEKLDPELDS) (GenScript, Piscataway, NJ, USA).
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2

Analyzing Cell Lysates with Western Blotting

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Total cell lysates were prepared by lysing 10∧6 cells in 100 µl SDS-sample buffer containing 5% 2β-mercaptoethanol. After boiling, 10 µl were separated by denaturing gel electrophoresis transferred to nitrocellulose membrane using semi-dry electroblotting and analysed by using antibodies against CDC27 (BD Transduction Lab, Vienna, Austria), α-tubulin (Tat-1, J. Gannon, Cancer Research UK, South Mimms, UK), BIM (BD Bioscience, Vienna, Austria), or GAPDH (mAb6C5, HyTest. Ltd., Turku, Finland) followed by enhanced chemiluminescence using HRP-conjugated secondary antibodies.
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3

Immunoblot Analysis of Mitotic Regulators

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Transfected HeLa were harvested and lysed with lysis buffer (50 mM Tris-HCl pH 7.5, 150 mM NaCl, 0.5% NP-40, protease inhibitors tablet from Roche, 50 mM NaF, 10 mM glycerol 2-phosphate disodium salt hydrate, 0.1 mM Na3VO4 and 1 mM DTT). 40 µg of total protein were separated by SDS-PAGE and probed with antibodies against BUBR1 (BD BioSciences), CDC27 (BD BioSciences), FLAG (Sigma), CDC20 (Santa Cruz), β-actin (Sigma) MAD2 (Covance), and BUB3 (BD BioSciences).
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4

Western Blot Analysis of Cell Cycle Markers

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Antibodies against CDK1 [47 (link)] and cyclin B1 [41 (link)] were obtained from sources as described previously. Antibodies against β-actin (Sigma-Aldrich), AURKA, CDC27, cleaved PARP1(Asp214), and phospho-PLK1Thr210 (BD Biosciences, Franklin Lakes, NJ, USA), AURKB (Sigma-Aldrich), phospho-AURKAThr288/AURKBThr232/AURKCThr198 (Cell Signaling Technology, Beverly, MA, USA), cleaved caspase 3 (using a Apoptosis Western Blot Cocktail, Abcam, Cambridge, UK), phospho-histone H3Ser10 and PLK1 (Santa Cruz Biotechnology, Santa Cruz, CA, USA) were obtained from the indicated suppliers. Immunoblotting was performed as described [44 (link)].
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5

Immunoblot Analysis of Oocyte Regulatory Proteins

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An equivalent of 0.5 oocyte was loaded on 12% SDS polyacrylamide gels58 (link) and immunoblotted as described21 (link). To visualize endogenous ARPP19, the equivalent of 1.5 oocytes was loaded on 15.5% Tris-Tricine gels59 (link). The following antibodies were used: phosphorylated MAPkinase, pMAPK (1/1,000, Cell Signaling 9106); Cyclin B2 (1/1,000, Abcam ab18250); Mos (1/1,000, Santa Cruz biotechnology Sc-86); Cdc27 (1/500, BD Transduction Laboratory 610454); Y15-phosphorylated Cdk1, pY15-Cdk1 (1/1,000, Cell Signaling 9111); phosphorylated-Cdk substrates, pCdk Sub. (1/1,000, Cell Signaling 2324) and HRP-conjugated antibody against GST (1/10,000, Sigma A-7340). Specific phospho-S67-ARPP19 (1/500), Gwl, ARPP19, PP2A-C subunit and B55δ antibodies were described in32 (link) and 35 (link). Specific anti-phospho-pS109 antibody directed against ARPP19 was raised by immunizing rabbits with the following peptide: CQDLPQRKPpSLVASK and then affinity-purified on columns containing the immobilized peptides (Covalab) (Supplementary Fig. 1). Appropriate horseradish peroxidase-labelled secondary antibodies (Jackson Immunoresearch) were revealed by chemiluminescence (Pierce). Full scans of all western blots are supplied in Supplementary Fig. 9.
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6

Immunoblot Analysis of Oocyte Regulatory Proteins

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An equivalent of 0.5 oocyte was loaded on 12% SDS polyacrylamide gels58 (link) and immunoblotted as described21 (link). To visualize endogenous ARPP19, the equivalent of 1.5 oocytes was loaded on 15.5% Tris-Tricine gels59 (link). The following antibodies were used: phosphorylated MAPkinase, pMAPK (1/1,000, Cell Signaling 9106); Cyclin B2 (1/1,000, Abcam ab18250); Mos (1/1,000, Santa Cruz biotechnology Sc-86); Cdc27 (1/500, BD Transduction Laboratory 610454); Y15-phosphorylated Cdk1, pY15-Cdk1 (1/1,000, Cell Signaling 9111); phosphorylated-Cdk substrates, pCdk Sub. (1/1,000, Cell Signaling 2324) and HRP-conjugated antibody against GST (1/10,000, Sigma A-7340). Specific phospho-S67-ARPP19 (1/500), Gwl, ARPP19, PP2A-C subunit and B55δ antibodies were described in32 (link) and 35 (link). Specific anti-phospho-pS109 antibody directed against ARPP19 was raised by immunizing rabbits with the following peptide: CQDLPQRKPpSLVASK and then affinity-purified on columns containing the immobilized peptides (Covalab) (Supplementary Fig. 1). Appropriate horseradish peroxidase-labelled secondary antibodies (Jackson Immunoresearch) were revealed by chemiluminescence (Pierce). Full scans of all western blots are supplied in Supplementary Fig. 9.
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7

Antibody Sources and Immunoblotting Analysis

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The following antibodies were obtained from the indicated sources: monoclonal antibodies against beta-actin (Sigma-Aldrich); cyclin A2 (AT10, a gift from Tim Hunt, Cancer Research UK); cyclin B1 (sc-245, Santa Cruz Biotechnology), cyclin E1 (sc-247, Santa Cruz Biotechnology), CDK1 (sc-54, Santa Cruz Biotechnology), CDK2 (sc-6248, Santa Cruz Biotechnology), CDK1(Y15p) (612307, BD Biosciences), cleaved PARP1 (552597, BD Biosciences), CDC25A (sc-7389, Santa Cruz Biotechnology), CDC25B (ab124819, Abcam), CDC25C (sc-13138, Santa Cruz Biotechnology), WEE1 (sc-5285, Santa Cruz Biotechnology), CDC27 (610455, BD Biosciences), EMI1 (37-6600, Zymed Laboratories), PLK1 (sc-17783, Santa Cruz Biotechnology), polyclonal antibodies against phosphorylated histone H3S10 (sc-8656R, Santa Cruz Biotechnology), MYT1 (sc-13081, Santa Cruz Biotechnology), γ-H2AX (A300-081A, Bethyl Laboratories), and HA (A190-208A, Bethyl Laboratories). Immunoblotting was performed as previously described (25 (link)). The positions of molecular size standards (in kDa) are indicated in the Figures. Quantification of signals on immunoblotting was conducted with Image Lab software (version 5.2.1 build 11, Bio-Rad Laboratories).
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