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4 protocols using fitc conjugated donkey anti mouse secondary antibody

1

Immunofluorescence Staining of Primary Cilia

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ARPE-19 cells were grown on coverslips, fixed and permeabilized with methanol at −20 °C for 10 min, and then non-specific sites were blocked by incubation with 3% BSA in Tris-buffered saline and Triton X-100 (TBST) (20 mM Tris, pH 7.5, 150 mM NaCl, 2 mM EGTA, 0.1% Triton X-100) for 30 min. The cells were incubated with anti-acetylated-tubulin antibody to detect primary cilia (1:1000; T6793; Sigma-Aldrich; St. Louis, MO). Acetylated tubulin is a well-accepted marker for primary cilia. Cells were then incubated with FITC-conjugated donkey anti-mouse secondary antibody (1:200; 715–095-150; Jackson ImmunoResearch Inc.; West Grove, PA). DNA was stained with 4′,6-diamidino-2-phenylindole (DAPI) incorporated into the mounting media (Vector Labs; Burlingame, CA). The intracellular localization of proteins was observed with a Nikon E600 fluorescence microscope, Pan Fluor 100× objective (N.A. 0.5–1.3) or Pan Fluor 40× objective (N.A. 0.75), fit with appropriate filters and images captured with an Orca II CCD camera, model C4742–95 (Hamamatsu; Middlesex, NJ) and Metamorph image analysis and acquisition software (Molecular Devices; Sunnyvale, CA, USA). Images were exported to Photoshop (Adobe; San Jose, CA) and only linear adjustments to brightness and/or contrast were performed.
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2

Visualizing Surface FasII Expression in S2R+ Cells

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S2R+ cells transfected with the pAc-Myc-fasII construct with or without mical-like dsRNA were incubated for 72 h and then treated with 100 μg/ml cycloheximide for 5 h to inhibit protein synthesis. To visualize surface FasII molecules, the cells were incubated with rabbit anti-Myc antibody (Cell Signaling, USA; 1:100) in culture medium for 1 h at 4°C and then fixed for 20 min with 4% formaldehyde in PBS. After washing three times with PBS, cells were incubated with Cy3-conjugated donkey anti-rabbit secondary antibody (Jackson ImmunoResearch Laboratories, USA; 1:200) for 30 min. To visualize the total pool of FasII, the same cells were then permeabilized with 0.2% Triton X-100 in PBS for 10 min and sequentially incubated with mouse anti-FasII antibody (DSHB, USA; 1:50) for 1 h and FITC-conjugated donkey anti-mouse secondary antibody (Jackson ImmunoResearch Laboratories, USA; 1:200) for 30 min. S2R+ cells showed no detectable levels of endogenous FasII based on anti-FasII immunostaining. Images of immunostained cells were acquired using a LSM 700 laser-scanning confocal microscope (Carl Zeiss, Germany). Images were processed using the ZEN imaging software. To quantify surface FasII expression, the fluorescence intensity of surface Myc-FasII (red) was normalized to the total Myc-FasII (green) fluorescence intensity.
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3

Immunofluorescent Analysis of Endothelial Cells

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Fixation of tissues was performed with 4% paraformaldehyde in PBS for 20 min and the vessels were processed for OCT (Tissue-Tek, USA) embedding. Five μm-frozen sections were cut with a cryostat, blocked with donkey serum (BD Pharmingen, USA), and incubated in rabbit anti-mouse CD31 (1:50, Abcam, UK) and mouse anti-mouse GFP (1:50, Santa Cruz, USA) overnight at 4°C. Incubation with Cy3-conjugated donkey anti-rabbit and FITC-conjugated donkey anti-mouse secondary antibodies was carried out for 1 h (1:200, Jackson ImmunoResearch, USA) at 37°C. The slides were then treated with DAPI for 10 min at room temperature. The slides were cover-slipped and imaged with a Leica immunofluorescence microscope.
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4

Flow Cytometry Analysis of Stem Cell Markers

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Flow cytometry was performed using an Astrios flow cytometer (Beckman coulter, Inc. Brea, CA, USA). Conjugated mouse anti-human antibodies APC anti-ESA, APC anti-CD49f, APC anti-CD44, FITC anti-CD24, PE anti-CD45, PE anti-CD31, PE anti-CD235 and anti-mouse H2KD were purchased from BD Pharmingen (San Diego, CA, USA). Unconjugated mouse anti-human antibody CD10 (BD Pharmingen) was used with FITC conjugated donkey anti-mouse secondary antibodies (Jackson ImmunoResearch Laboratories, West Grove, PA). Cells were harvested by dissociation using 0.05% trypsin/EDTA. 1 × 106 cells were resuspended in 200 μl HBSS with 2% FBS and then stained with the proper amount of antibodies (according to the instruction sheet) for 30 minutes at 4°C. Cells incubated with unconjugated antibodies were stained with secondary antibodies for another 30 min at 4°C. For the Aldefluor assay, the ALDEFLUOR kit (StemCell Technologies Inc., Vancouver, BC, Canada) was used and perform as previously described [21 (link)]. Dead cells were excluded by DAPI staining (0.2 μg/ml). Stem cell percentages in tumor cells were analyzed after gating out H2KD positive mouse cells.
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