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Ice cold lysis buffer

Manufactured by Beyotime
Sourced in China

Ice-cold lysis buffer is a solution used to disrupt and lyse cells during protein extraction and purification procedures. It is designed to maintain the integrity and functionality of cellular proteins by providing a controlled environment for cell lysis at low temperatures.

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16 protocols using ice cold lysis buffer

1

Western Blot Analysis of SIRT1 Protein

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Cells were lysed with ice-cold lysis buffer (Beyotime Institute of Biotechnology, Shanghai, China), and protein was separated with 12% sodium dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) (Beyotime Institute of Biotechnology), which was then transferred onto polyvinylidene difluoride membrane (Thermo Fisher Scientific). The membrane was then incubated with PBS containing 5% non-fat milk (Yili, Beijing, China) overnight at 4°C. After washed with PBST for 3 times, the membrane was incubated with rabbit polyclonal anti-SIRT1 antibody (1:200; Abcam, Cambridge, MA, USA) or rabbit polyclonal anti-GAPDH antibody (1:200; Abcam) at room temperature for 3 h. After washed with PBST for 3 times, the membrane was incubated with goat anti-rabbit secondary antibody (1:10,000; Abcam) at room temperature for 1 h. The immunoreactive band was detected using the enhanced chemiluminescence system (Thermo Fisher Scientific), according to the manufacture's instruction. The protein expression was measured using Image Pro Plus software (Media Cybernetics, Rockville, MD, USA).
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2

Western Blot Analysis of Adipose Tissue Proteins

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Adipose tissues were homogenized in an ice cold lysis buffer (Beyotime Biotech, Haimen, Jiangsu, China) containing 1% NP-40, 0.5% deoxycholate, 0.1% SDS and 1% protease inhibitor cocktail (Roche Diagnostics, Mannheim, Germany). The homogenate was centrifuged at 12,000× g for 10 min at 4 °C and the supernatant was collected. Protein concentration in samples was determined using BCA Protein Assay Reagent (Beyotime Biotech, Haimen, Jiangsu, China). The 20 µg of protein of each sample was electrophoretically separated in 7.5% to 12.5% sodium dodecyl sulfate polyacrylamide gel and then transferred to polyvinylidene diflouride membrane (Millipore, Billerica, MA, USA). Membranes were blocked with 5% (w/v) skimmed milk powder in tris-buffered saline supplemented with 0.05% (v/v) Tween 20 (TBST) for 2 h and then incubated with primary antibodies overnight at 4 °C. The membranes were next incubated with horseradish-peroxidase-conjugated secondary antibodies at room temperature for 1 h. The bands were visualized with enhanced chemiluminescence (ECL) reagents (Millipore, Billerica, MA, USA), and quantified densitometrically using the software ImageJ 1.47v (Wayne Rasband, Bethesda, MD, USA).
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3

BECN1 Immunoprecipitation and Western Blot

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Cells were lysed at 4°C in ice-cold lysis buffer (Beyotime Institute of Biotechnology) and the cell pellet was prepared by centrifugation (12,000 × g for 10 min at room temperature). Immunoprecipitation was performed using anti-BECN1 antibody, which was captured with protein A+G agarose beads (Beyotime Institute of Biotechnology). The bead-bound proteins were then eluted by boiling in SDS sample buffer, subjected to PAGE and analyzed by WB.
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4

Western Blot Analysis of Inflammatory Markers

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Ice-cold lysis buffer (Beyotime) was utilized to lyse HPAEpiCs. The proteins were separated and transferred onto polyvinylidene fluoride membrane, which was blocked in nonfat dried milk. Subsequently, the polyvinylidene fluoride membranes were incubated with the following primary antibodies: anti-inducible NOS (anti-iNOS; Cat#MA5-17139; 1:1000; Thermo Fisher, Waltham, MA, USA), anti-cyclooxygenase-2 (anti-COX2; Cat#MA5-14568; 1:1000; Thermo Fisher), anti-p-p65 (Cat#AF2006; 1:2000; Affinity, Nanjing, China), anti-p65 (Cat#AF5006; 1:1000; Affinity) and anti-GAPDH (Cat#MA1-16757; 1:1000; Thermo Fisher). After being washed with PBS, secondary antibodies (Cat#A32731/A32723) were used to incubate the membranes. At last, immunoreactive bands were visualized using eyoECL Plus (Beyotime).
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5

Isolation and Analysis of PSD-95 from Spinal Lumbar Tissue

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The spinal lumbar DH was isolated, homogenized in ice-cold lysis buffer (Beyotime Institute of Biotechnology, China), and centrifuged at 5000 rpm for 15 min at 4 °C. The protein concentration in the supernatant was determined by the bicinchoninic acid assay. The supernatants were then incubated with 2 μg mouse monoclonal PSD-95 antibody (Santa Cruz Biotechnology, Inc., Santa Cruz, CA) overnight at 4 °C. Then, 30 μL of protein G magnetic beads (Millipore Bioscience, MA) were added to the reaction and incubated for an additional 2 h. Samples were centrifuged at 2500 rpm for 5 min and the pellets were washed three times in lysis buffer. Bound proteins were extracted by 1× sodium dodecyl sulfate-polyacrylamide gel electrophoresis sample buffer (10 μL), boiled at 100 °C for 5 min, and then centrifuged at 5,000 rpm for 10 s. The supernatants were subsequently analyzed by immunoblotting according to standard procedures described below.
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6

Protein Extraction and Immunoblotting Analysis

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L02 cells were pretreated and incubated as described above. Total cell proteins, nuclear proteins and cytoplasmic proteins from L02 cells pretreated with Hyp were extracted with ice-cold lysis buffer (Beyotime Biotechnology, Shanghai, China) according to the manufacturer’s instruction. Protein concentrations were determined using the BCA assay (Pierce, Rockford, IL, USA). Protein (30 μg) from each sample was separated by 10% SDS-PAGE and then transferred to polyvinylidene fluoride (PVDF) membranes (Merck Millipore, Darmstadt, Germany). The membranes were blocked with 5% BSA for one hour at room temperature and incubated overnight at 4°C using 1:1000 dilutions of relevant primary mouse antibodies, followed by 1:1000 dilutions of goat anti-mouse secondary antibodies. The protein bands were visualized using the ECL system (Thermo Scientific, Rockford, IL, USA), and the density was determined by Image J software (NIH, USA).
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7

Western Blot Analysis of Cardiac Fibroblast Proteins

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Cardiac fibroblasts were lysed with ice-cold lysis buffer (Beyotime Institute of Biotechnology, Haimen, China) to obtain total protein. Protein samples (20 µg) were quantified using BCA Protein Assay kit, and separated by 10% SDS-PAGE, and then the proteins were transferred to polyvinylidene difluoride membranes (EMD Millipore). Then, the membranes were blocked with 5% milk in Tris-buffered saline, followed by incubation with the appropriate primary antibodies: Smad7 (1:1,000; product code ab90086; Abcam); Smad3 (1:1,000; product no. 9513); p-Smad3 (1:1,000; product no. 9520); and β-actin, (1:2,000; product no. 4970; all from CST) overnight at 4°C. Membranes were then incubated with horseradish peroxidase-conjugated secondary antibodies (1:2,000 dilution; cat. no. 7074; from Cell Signaling Technology, Danvers, MA, USA), and developed using High Sensitivity ECL Substrate kit (product code ab133406; Abcam). The stained protein bands were visualized using Bio-Rad ChemiDoc XRS equipment, and quantified and analyzed using Quantity One software. Three repeats were performed.
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8

Western Blot Analysis of FOXC1 Protein

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Cells were lysed with ice-cold lysis buffer (Beyotime Institute of Biotechnology, Haimen, China) and centrifugation was performed at 12,000 × g at 4°C for 10 min. Protein concentration was determined using a bicinchoninic acid protein acid kit (Santa Cruz Biotechnology, Inc., Dallas, TX, USA). Proteins (60 µg) were separated by 10% SDS-PAGE (Beyotime Institute of Biotechnology) and transferred onto a polyvinylidene difluoride (PVDF) membrane (Thermo Fisher Scientific, Inc.). The PVDF membrane was incubated with phosphate-buffered saline (PBS) containing 5% non-fat milk (Mengniu Dairy Co., Ltd., Hong Kong, China) overnight at 4°C, followed by incubation with rabbit anti-human FOXC1 antibody (1:50, ab24067) and GAPDH antibodies (1:100, ab9485) (both from Abcam, Cambridge, MA, USA) at room temperature for 3 h. Following 3 washes with PBS with Tween-20, the membrane was incubated with horseradish peroxidase-conjugated goat anti-rabbit secondary antibodies (1:5,000, ab97051; Abcam) at room temperature for 1 h. An enhanced chemiluminescence system (Thermo Fisher Scientific, Inc.) was used to detect the immunoreactive bands. Protein expression was measured using Image-Pro Plus 6.0 software (Media Cybernetics, Inc., Rockville, MD, USA). GAPDH was used as an internal reference. Three replicates were performed.
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9

Protein Expression Analysis in Hippocampal Tissue

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After administration of fullerenol or normal ACSF for 20 minutes, the hippocampal tissues were removed from the slices and crushed with a pestle in an ice-cold lysis buffer (Beyotime) with protein inhibitor cocktail (Roche Applied Science, Indianapolis, IN, USA) for 45 minutes. The homogenates were centrifuged at 12,000 rpm for 25 minutes at 4°C. The protein concentrations were determined using a BCA protein assay kit (Beyotime). The protein was mixed with sodium dodecyl sulfate sample buffer, heated to 100°C for 15 minutes, separated under reducing conditions on an 8% sodium dodecyl sulfate–polyacrylamide gel, and then transferred to polyvinylidene difluoride membranes (EMD Millipore, Billerica, MA, USA). The membrane was incubated with antibodies against NOS (Boster, Wuhan, People’s Republic of China), CaMKII (Santa Cruz Biotechnology Inc., Dallas, TX, USA), p-CaMKII (Promega, Madison, WI, USA), GAPDH (EMD Millipore), and tubulin (Beyotime) overnight at 4°C with horseradish peroxidase-linked secondary antibody (Promega) for 1 hour at room temperature. The bands were detected using chemiluminescence (GE Healthcare Bio-Sciences Corp., Piscataway, NJ, USA). The optical density of each band was determined using ImageJ software and normalized to that of GAPDH or tubulin.
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10

Skin Protein Expression Analysis

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P24 Dorsal skin (Dox since P21) was homogenized in ice-cold lysis buffer (Beyotime, China) with 1% PMSF (Phenylmethylsulfonyl fluoride). Samples were centrifuged at 10,000g for 20 min at 4℃ and the protein concentration of the resulting supernatant was determined by the BCA (bicinchoninic acid) protein assay kit (Beyotime, China). Proteins (30μg) were separated by SDS-PAGE electrophoresis and subsequently transferred to PVDF membranes. Membranes were blocked with 5% nonfat dry milk in incubation buffer and incubated with primary antibodies against Tubulin, Dlx3, Sostdc1, Hoxc13 and Foxn1. Bound antibody was detected with peroxidase-linked secondary antibody and a chemiluminescence detection system.
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