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6 protocols using thenoyltrifluoroacetone ttfa

1

Investigating Cytotoxic Agents and Apoptosis

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Cells were treated with PST, PST Analogs, Taxol (Sigma-Aldrich Canada, Cat. No. T7402, Mississauga, ON, Canada), Staurosporine (STS) (Sigma-Aldrich Canada, Cat. No. S4400, Mississauga, ON, Canada), Doxorubicin (DOX) (Sigma-Aldrich Canada, Cat. No. D1515, Mississauga, ON, Canada), Gemcitabine (GEM) (Sigma-Aldrich Canada, Cat. No. G6423, Mississauga, ON, Canada), piperlongumine (PL) (INDOFINE Chemical Company, Inc., Cat. No. P-004, Hillsborough, NJ, USA), the broad spectrum caspase inhibitor, Z-VAD-FMK (EMD Chemicals, Gibbstown, NJ, USA), Antimycin A (AMA) (Sigma-Aldrich Canada, Cat. No. A8674, Mississauga, ON, Canada), Thenoyltrifluoroacetone (TTFA) (Sigma-Aldrich Canada, Cat. No. T27006, Mississauga, ON, Canada), rotenone (ROT) (Sigma-Aldrich Canada, Cat. No. R8875, Mississauga, ON, Canada), carbonyl cyanide-4-(trifluoromethoxy)phenylhydrazone (FCCP) (Sigma-Aldrich Canada, Cat. No. C2920, Mississauga, ON, Canada), mitoTEMPO (Sigma-Aldrich Canada, Cat. No. SML0737, Mississauga, ON, Canada) and EM20-25 (Sigma-Aldrich Canada, Cat. No. SML0183, Mississauga, ON, Canada) dissolved in DMSO stock solutions. N-Acetyl-L-cysteine (NAC) (Sigma-Aldrich Canada, Cat. No. A7250) was dissolved in double distilled water. PST analogs were produced by synthesis from bromobenzene24 (link)55 (link).
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2

Diverse Chemical Reagents for Research

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Antimycin A (#A8674), carbonyl cyanide m-chlorophenyl hydrazone (CCCP, #C2759), chloramphenicol (#C0378-5G), clotrimazol (#C6019), lonidamine (#L4900), paclitaxel (#T7402), potassium cyanide (#60178), rotenone (#45656), sodium azide (NaN3, #S200), thenoyltrifluoroacetone (TTFA, #88300), tigecycline (#220620097) and vinblastine (VBL, #V1377) were purchased from Sigma (Munich, Germany), cycloheximide (#8682.1) from Roth (Karlsruhe, Germany), N-(2-Quinolyl)valyl-aspartyl-(2,6-difluorophenoxy)methyl ketone (QVD, #S7311) from Selleckchem (Houston, TX, USA), oligomycin A (#O532970) from Toronto Research Chemicals (Toronto, Canada), etoposide (#1043) from Biovision and staurosporine (STS, #9300) from LC Laboratories (Woburn, MA, USA). All other substances for which a manufacturer is not explicitly specified were obtained from Carl Roth.
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3

Mitochondrial Oxidative Stress Assay

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MitoQ (mitoquinone mesylate:10-(4,5-dimethoxy-2-methyl-3,6-dioxo-1,4 cyclohexadienyl) decyltriphenyl- phosphonium methanesulfonate) was provided by. MP Murphy. CoQ10, paraquat (PQT), 2,4-Dinitrophenylhydrazine, thenoyltrifluoroacetone (TTFA), antimycin, sodium azide and dimethylsulfoxide (DMSO) were purchased from Sigma-Aldrich. H2DCFDA and MitoSOX Red were obtained from Life Technologies.
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4

Investigating TNF Signaling Pathways

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TNF siRNA, 2-Amino-5,6-dihydro-6-methyl-4H-1,3-thiazine hydrochloride (AMTH), NF-kB p105/50, p100/52, p65, Lysosomal-associated membrane protein 1 (LAMP-1) and cathepsin H (CTSH) antibodies were obtained from Santa Cruz Biotechnology, TX, USA. TNF recombinant mouse proteins and the other TNF siRNA construct were obtained from Thermo Fisher Scientific, MA, USA while Texas red-goat anti-rat IgG antibody and Lipofectamine RNAiMAX were purchased from Life Technologies, CA, USA. FITC-conjugated goat anti-rabbit IgG antibody, thenoyltrifluoroacetone (TTFA) and diphenylene iodinium chloride (DPI) were obtained from Sigma-Aldrich, MO, USA.
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5

Metabolic Modulators for Cell Experimentation

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Canagliflozin, dapagliflozin, empagliflozin, antimycin A, oligomycin A and CPI-613 were from Selleckchem (Munich, Germany). Rotenone, UK5099, thenoyltrifluoroacetone (TTFA) and EGCG were from Sigma-Aldrich (Munich, Germany) and atpenin A5 was purchased from Enzo Life Sciences (Lörrach, Germany).
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6

Quantifying Intracellular NADPH-Dependent Superoxide

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-production The levels of intracellular NADPH-dependent O 2production was assessed by chemiluminescence of lucigenin (bis-Nmethylacridinium nitrate; Sigma Chemical) as described previously. 22 INS-1 cells were incubated with various concentrations of AOPP for indicated time. To verify the sources of O 2
-production, cells were pre-treated for 1 h at 37 °C with NADPH oxidase inhibitors (diphenyleneiodonium, DPI, 100 μmol/l; apocynin, 10 μmol/l), a nitric oxide synthase inhibitor (N 4 -nitro-L-arginine methyl ester, L-NAME, 10 μmol/l), a xanthine oxidase inhibitor (oxypurinol, 100 μmol/l), a mitochondria complex I inhibitor (rotenone, 250 μmol/l), a mitochondria complex II inhibitor thenoyltrifluoroacetone (TTFA, 10 μmol/l), a mitochondria complex III inhibitor (myxothiazol, 10 μmol/l) and a O 2 -scavenger (c-SOD, 200 U/ml) (all from Sigma Chemical), respectively. The experiments were then repeated as described above. Cell homogenate (100 μg/well) were added into a 96-well microplate. Immediately before recording, dark-adapted lucigenin (5 μmol/l) with or without NADPH (100 μmol/l) were added to cell homogenates. Light emission was recorded every minute for 30 min (VICTOR V Wallac 1420; PerkinElmer, Turku, Finland). Data were expressed as counts per second (c.p.s.).
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