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10 protocols using penn strep

1

Isolation and Propagation of Human MSCs

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Following informed consent and IRB approval at the authors’ institution, human MSCs were isolated from lipo-aspirates obtained from three representative donors (cell lines: 211, 258 and 283) using previously described methods [48 (link)–50 (link)]. The donor-derived MSCs selected in this study were propagated with platelet lysate containing zoonotic free media and have been previously shown to express standard MSC markers and to undergo multi-lineage differentiation [48 (link), 49 (link), 51 (link), 52 (link)]. In brief, lipo-aspirates were digested with Type I collagenase (Worthington Biochemicals, Lakewood, NJ) for 1.5 hours at 37°C, centrifuged at 400g for 5 min, rinsed with phosphate buffered saline (Life Technologies, Grand Island, NY), and strained using 70μm cell strainers (BD Biosciences, San Jose, CA). Following this, the aspirate was treated with 154 mM NH4Cl, 10 mM KHCO3, and 0.1 mM EDTA for erythrocyte lysis. The remaining MSCs were expanded in advanced minimum essential medium (Life Technologies, Grand Island, NY), supplemented with 5% (vol/vol) human platelet lysate (PLTMax; MillCreekLifeSciences, Rochester, MN), 2mM Glutamax (Life Technologies, Grand Island, NY), 2 U/mL heparin, and 1% Penn-Strep (100 U/mL penicillin, 100 μg/mL streptomycin; Cellgro, Corning, NY). All MSCs used in experimentation were of passage 7.
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2

Isolation of Pure Astrocytes from Spinal Cord

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Primary astrocytes were prepared from spinal cord of nontransgenic mice (P2–P4). Briefly, flushed spinal cords were cut into small pieces followed by trypsin‐DNase treatment and mechanical resuspension. After plating for 2 weeks, cells were then shaken overnight for 4 days to remove nonspecific glia. Cell monolayers were >95% astrocyte‐pure as determined by glial fibrillary acidic protein (GLAST) immunostaining. Cells were maintained in culture in DMEM F12 50/50 (Cellgro, 10–092CV), 20% heat‐inactivated FBS (Cellgro, 35‐016‐CV), 1% Penn‐Strep (Cellgro, 30‐002‐CI), 1X Fungin (InVivoGen, ant‐fn‐2), 1X Primocin (InVivoGen, ant‐pm‐2), 0.25% Gentamicin (Invitrogen, 15710‐064).
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3

Isolation and Culture of Murine Cortical Neurons

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Both hemispheres of the cerebral cortex from 1-week-old WT and Mecp2-null mice were excised under sterile conditions, and their meninges were removed carefully by submerging the cerebral cortex in sterile warm phosphate-buffered saline (PBS). The cleaned cortices were suspended in 0.5% trypsin for 15 min to digest the tissue. The trypsin was neutralized using Dulbecco’s modified Eagle’s medium (DMEM; 4.5 g, glucose 10% FBS and 1% Penn/Strep) medium (Cellgro, Manassas, VA, USA). The tissue was minced using constant pipetting, and the tissue suspension was filtered through a 40-μm nylon cell strainer (BD Falcon, Franklin Lakes, NJ, USA) to remove tissue debris. The filtered cell suspension was centrifuged at 1000 rpm for 5 min at 4 °C, and the pellet was resuspended in culture media and was seeded in collagen-coated T-175 flasks and left undisturbed for enhancing their attachment of the cells for a period of 7 days at 37 °C and 5% CO2 atmosphere. Later, the cell debris and unattached cells in the culture were removed by gently changing the media every 2 days to grow and expand until 90% confluency was achieved for another week.
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4

AMSC Isolation from Lipoaspirates

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Following informed consent and IRB approval at the authors′ institution, human AMSCs were isolated from lipo-aspirates obtained from a representative donor using previously described methods13 (link), 14 (link),49 (link). The donor-derived AMSCs selected in this study have previously been shown to express standard MSC markers and are capable of multi-lineage differentiation13 (link)–15 (link). In brief, donor lipo-tissue was aspirated and then digested using Type I collagenase (Worthington Biochemicals, Lakewood, NJ) for 1.5 hours at 37°C, centrifuged at 400g for 5 min, rinsed with phosphate buffered saline (Life Technologies, Grand Island, NY), and strained using 70μm cell strainers (BD Biosciences, San Jose, CA). Following this, the aspirate was treated with 154 mM NH4Cl, 10 mM KHCO3, and 0.1 mM EDTA for erythrocyte lysis. The remaining AMSCs were expanded in advanced minimum essential medium (Life Technologies, Grand Island, NY), supplemented with 5% (vol/vol) human platelet lysate (PLTMax; MillCreekLifeSciences, Rochester, MN), 2mM Glutamax (Life Technologies, Grand Island, NY), 2 U/mL heparin, and 1% Penn-Strep (100 U/mL penicillin, 100 μg/mL streptomycin; Cellgro, Corning, NY). All AMSCs used in experimentation were of passage 7.
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5

Isolation and Culture of Rabbit Cortical Neurons

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Cerebral cortices from 1–3 day old New Zealand white rabbits were excised, meninges removed, and suspended in 5 mL of 0.5% trypsin for 15 min to digest the tissue. The trypsin was neutralized using DMEM medium (DMEM-4.5 g, glucose10% FBS and 1% Penn/Strep) (Cellgro, Manassas, VA USA). The tissue was minced using constant pipetting and the tissue suspension was filtered through a 40 μm nylon cell strainer (BD falcon, franklin lakes, NJ, USA) to remove tissue debris. The filtered cell suspension was centrifuged at 1000 rpm for 5 min at 4°C and the pellet was re-suspended in culture media and were seeded in T-175 flasks and left undisturbed for enhancing their attachment of the cells for a period of 7 days at 37°C and 5% CO2 atmosphere. Later the cell debris and unattached cells in the culture were removed by gently changing the media every 2 days to grow and expand until 90% confluency for another week.
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6

MC3T3-E1 Osteoblast Cell Culture

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MC3T3-E1 Subclone 4 osteoblastic cell lines, acquired from ATCC (ATCC CRL-2594), were cultured in αMEM + Glutamax (GIBCO 32571–036) and supplemented with 10% fetal bovine serum (FBS, Sigma Aldrich) and 1% Penn/Strep (Corning). To stimulate procollagen synthesis and secretion, 100 μM ascorbic acid 2-phospate (Sigma Aldrich) was supplemented during transfection, 12–24 h before imaging.
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7

Establishment of Ovarian Cancer Cell Lines

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Human EOC cell line A2780-CP20 (designated as CP20) was a kind gift from Dr. Anil Sood (MD Anderson Cancer Center, Houston, TX); OV90 was from American Type Culture Collection (Manassas, VA). EGFP (enhanced green fluorescent protein) stably expressing CP20 or OV90 cells were established by transfecting the cells with pcDNA3-EGFP vector (Watertown, MA) with FuGENE 6 Transfection Reagent (E2691, Promega, Madison, WI). All cell lines were cultured in RPMI 1640 (10-040-CV, Corning, NY) with 10% Fetal Bovine Serum (FBS, 16000-044, Life technologies, Carlsbad, CA) and 1% Penn-Strep (15140-122, Life technologies). Primary ovarian CAF TAF18 were isolated and identified in this laboratory [39 (link)], grown in DMEM:F12 (10-090, Corning, NY) with 15% FBS and 1% Penn-Strep, and used up to passage 7. HMEC, a kind gift from Dr. Xin Zhang (OUHSC Stephenson Cancer Center, Oklahoma City, OK), and HUVEC (Lonza, Walkersville, MD) were propagated in Endothelial Cell Growth Medium 2 (EGM, CC-3162) and used up to passage 7 [56 (link)]. When different types of cells were cultured together, the mixed cells were grown in a mixed medium prepared by combining equal volumes of the individual medium for each of the three cell types. All cells were maintained in a humidified 95% air and 5% CO2 atmosphere at 37 °C.
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8

Immortalized Mouse Embryo Fibroblasts for DNA Repair

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Isogenic SV-40 large T antigen immortalized mouse embryo fibroblasts (MEFs) that are wild type (WT), Ku70/, Brca2 deficient (Brca2m/m), Polq/, and a subclone of Polq/-complemented by expression of human POLQ (PolqhPOLQ) were previously described (6 (link),23 (link)). MEFs expressing DR-GFP reporter were a gift from Dr. Jeremy Stark lab (24 (link)). All MEFs were maintained in Dulbecco's modified Eagle's medium (DMEM, Corning), with 10% Bovine Calf Serum (Hyclone BCS) and 2 mM l-glutamine (ThermoFisher), and PolqhPOLQ cells were supplemented with 2 μg/ml puromycin. Mouse ES cells (TC1) were cultured with DMEM supplemented with 15% FBS (Gibco, 1972526), 10 mM HEPES pH 7.5, 10 mM NEAA, 0.1% 2-betamercaptoethanol (Gibco, 21985023), 1% Penn-Strep (Corning, 30-002-CI) and 1:500 Leukemia inhibitory factor (LIF) treated media produced from LIF-1Cα (COS) cells. All cells were maintained at 37°C in an atmosphere of 5% CO2. Cells in culture were routinely monitored for mycoplasma contamination using the Plasmo Test™ (Invivogen).
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9

Immortalized OCT4+ Mouse Embryonic Fibroblasts

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CiA:Oct4 MEF cell lines immortalized by infection of simian virus 40 large T antigen, were obtained and cultured as previously described (Hathaway et al., 2012 (link)). Briefly, cells were cultured at 37 °C 5% CO2 conditions. Base media was either FluoroBrite DMEM Media (ThermoFisher, A1896701) for imaging, or DMEM (Corning, MT10013CV) for standard cell culture. Media was supplemented with 10% FBS (Gibco, Lot:1972526), 10 mM HEPES pH 7.5, 10 mM NEAA, 0.1% 1000 × 2-betamercaptoethanol (Gibco, 21,985,023), 1% 100× Penn-Strep (Corning, 30–002-CI). Additionally, l-Glutamine (Corning, 25005CI) at 4 mM was added to FluoroBrite media.
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10

Immortalized OCT4+ Mouse Embryonic Fibroblasts

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CiA:Oct4 MEF cell lines immortalized by infection of simian virus 40 large T antigen, were obtained and cultured as previously described (Hathaway et al., 2012 (link)). Briefly, cells were cultured at 37 °C 5% CO2 conditions. Base media was either FluoroBrite DMEM Media (ThermoFisher, A1896701) for imaging, or DMEM (Corning, MT10013CV) for standard cell culture. Media was supplemented with 10% FBS (Gibco, Lot:1972526), 10 mM HEPES pH 7.5, 10 mM NEAA, 0.1% 1000 × 2-betamercaptoethanol (Gibco, 21,985,023), 1% 100× Penn-Strep (Corning, 30–002-CI). Additionally, l-Glutamine (Corning, 25005CI) at 4 mM was added to FluoroBrite media.
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