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8 protocols using trustain fcx plus anti mouse cd16 32

1

Isolation and Characterization of Non-Cardiomyocytes from Murine Hearts

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Non-CMs purified from Langendorff perfused hearts were suspended in 500ul of FACS buffer (5% FBS, 0.01% NaN3 in 1X PBS) and blocked with Fc receptor antibody specific for FcγR III/II (Biolegend TruStain FcX PLUS anti-mouse CD16/32; 1:50 dilution) for 15 minutes, then stained with indicated antibodies for 30–40 minutes. After staining, cells were washed three times with FACS buffer and resuspended in 400ul of 5% FBS in 1X PBS. Stained cells were subjected to flow cytometry using a BD FACSAria II cell sorter. Antibodies used in this study are mCD45-PB (Biolengend; 1:100), mCx3cr1-APC (Biolegend; 1:100), CD31-PE-Cy7 (Invitrogen; 1:50), and mEFSK4-APC (Miltenyi Biotec; 1:40).
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2

Multiparameter Flow Cytometry of Adipose SVF

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Stromal vascular fraction (SVF) cells were harvested from the inguinal AT, and to block Fc receptors, they were incubated with FC block (Cat # 156604, TruStain FcX PLUS, anti-mouse CD16/32, BioLegend, London, UK) for 10 minutes. For the macrophages panel, cells were stained with anti-CD86-APC-R700 (Cat # 565479, BD Biosciences, San Jose, USA), anti-F4/80-APC antibody (Cat # 123116, BioLegend), and anti-CD11b PE-Cy7 (Cat # 25-0112-81, eBioscience, San Diego, USA). For the eosinophils panels, anti-Siglec-F BV421 (Cat # 562681, BD Biosciences), anti-CD11b APC (Cat # 101212, BioLegend), anti-CD63 PE(Cat# 564222, BD Biosciences), and anti-CD193 (CCR3) Alexa 647 (Cat# 144508, BioLegend) were used. After staining, cells were washed with a washing buffer (2% FCS in PBS) and analyzed using a BD FACSLyric™ flow cytometer (BD Biosciences).
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3

Immunohistochemistry Analysis of Mouse Lung Tissue

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Immunohistochemistry protocol was previously described (7 (link)). Briefly, lung tissue sections from mouse (4-μm-thick) were prepared and deparaffinized by incubating at 60 °C for 30 min and 2X wash in xylene for 5 min each. Tissues were rehydrated with gradient series of ethanol (absolute; 95%, 90%, 80%, and 70% in water) with 3 min each incubation followed by blocking in PBS containing 10% BSA and 10% normal goat serum then incubated with TruStain FcX PLUS anti-mouse CD16/32 (BioLegend;156604) to block nonspecific binding of immunoglobulin to the Fc receptors. All the sections were stained with NOX4 anti-rabbit polyclonal Ab (NB110-58849), TIM23 anti-mouse Ab (67535-1-Ig), F4/80-PE anti-mouse (BioLegend; 123109), Goat Anti-Rabbit IgG-FITC (Southern Biotech; 4030-02), and Goat Anti-Mouse IgG1-AF647 (Southern Biotech; 1073-31) in 2% BSA and 2% normal goat serum for 1 h each and then counterstained with DAPI (MP Biologicals; 157577). Tissue sections were fixed with cover slide using Vecta Mount, permanent mounting medium (Vector Laboratories; H-5000), followed by confocal microscopy. The Nikon A1 confocal microscope was used for imaging, and all the images were quantitated using ImageJ (NIH).
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4

Tumor-Targeted Dendritic Cell Activation

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All mice used were purchased from Charles River Laboratories. To construct the tumor model, 4T1(1 × 106 cells per mouse) in 25 µL PBS were implanted into the right flanks of BALB/c female mice (6–8 weeks old). Mice were intravenously injected with AMDs (5 × 106 units per mouse) or intratumoral injection of AMDs (1 × 105 units per mouse) on day 7, and each of the treatments was followed by 660 nm (1.0 W cm−2, 5 min) on day 8. For FACS of t DC cells in TDLNs, TDLNs were collected on day 13. The lymph nodes were dissected from the surrounding fascia, weighed, and minced into pieces by a gentleMACS Dissociator (Miltenyi Biotec). Cell clumps were removed through a 100‐µm cell strainer to obtain single‐cell suspensions. The suspension was centrifuged, and the cell pellets were washed twice with cell staining buffer (Biolegend), blocked 0.25 µg of TruStain FcX PLUS (anti‐mouse CD16/32, BioLegend) Antibody per 106 cells in a 100 µL volume for 5–10 min on 4 °C, and anti‐CD45‐FITC, anti‐ CD11c‐PerCP/Cyanine5.5, anti‐ CD80‐APC, anti‐ CD86‐PE‐Cy7, and anti‐ MHC II‐BV605 antibodies at predetermined optimum concentrations (0.25 µg per 106 cells in a 100 µL volume) were added and incubated on 4 °C for 20 min in the dark. The LIVE/DEAD Fixable Violet Dead Cell Stain Kit (L34963, Invitrogen) was used to determine cell viability during FACS analysis.
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5

Multiplexed scRNA-seq of Organ-Specific B Cells

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B cells from different organs were incubated in TruStain FcX™ PLUS (anti-mouse CD16/32) (BioLegend) blocking reagent for 10 min at 4°C, and then each sample was stained with 1 μg different hashtag antibodies (BioLegend) and incubated for 30 min at 4°C. Cells were washed three times with Cell Stain Buffer (BioLegend) and resuspended with PBS + 0.04% BSA (Sigma). According to the cell number count, B cells from different organs were mixed at the ratio of 1:1 and cell concentrations were adjusted to about 1,000 cell/µl. For 10× Genomics scRNA-seq, cells were loaded onto a 10× chromium controller to generate Gel beads in emulsion using the 10× genomics Single Cell 5′ Library & Gel Bead Kit. Gene expression libraries were constructed according to instructions from 10× genomics. Three libraries were generated that measure (1) mRNA transcript expression (RNA), (2) mouse-specific hashtag oligos (HTO), and (3) BCR library. Libraries were sequenced by the NovaSeq 6000 sequencing system (Illumina, San Diego, CA, USA).
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6

Tracking OMVs in Lymph Nodes

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Dye-labeled free OMVs or OM-NDs were administered into mice via the hock at a protein dose of 20 μg. After 6 h, the mice were euthanized, and the draining popliteal lymph nodes were collected. The fluorescence in each lymph node was visualized and quantified using an IVIS Lumina in vivo imaging system. To analyze the cellular-level distribution, each draining popliteal lymph node was mechanically sheared and extruded through a 40-μm cell strainer (Bel-Art) to form a single-cell suspension. Then, 5 × 105 cells were blocked with TruStain FcX PLUS anti-mouse CD16/32 at 4 °C for 10 min, followed by staining with LIVE/DEAD fixable aqua, PE/Cy7 anti-mouse CD11c (N418, BioLegend), FITC anti-mouse CD3 (17A2, BioLegend), Pacific Blue anti-mouse CD19 (6D5, BioLegend), APC/Cy7 anti-mouse CD11b (M1/70, BioLegend), PE anti-mouse F4/80 (BM8, BioLegend), and PerCP anti-mouse Ly-6G/Ly-6C (Gr-1) (RB6-8C5, BioLegend) for 30 min. Finally, the cells were washed and resuspended in PBS containing EDTA and BSA. Data was collected on a Becton Dickinson LSRFortessa flow cytometer, and analysis was performed using FlowJo software.
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7

Evaluating OMV-Induced Dendritic Cell Activation

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Free OMVs or OM-NDs were administered into mice via the hock at a protein dose of 0.5 μg. After 48 h, the mice were euthanized, and the draining popliteal lymph nodes were collected. Each lymph node was mechanically sheared and extruded through a 40-μm cell strainer to form a single-cell suspension. Then, 5 × 105 cells were blocked with TruStain FcX PLUS anti-mouse CD16/32 at 4 °C for 10 min, followed by staining with LIVE/DEAD fixable aqua, FITC anti-mouse CD40, Alexa 647 Fluor anti-mouse CD86, APC/Cy7 anti-mouse F4/80 (BM8, BioLegend), and PE/Cy7 anti-mouse CD11c for 30 min. Then, the cells were washed and resuspended in PBS containing EDTA and BSA. Data was collected on a Becton Dickinson LSRFortessa flow cytometer, and analysis was performed using FlowJo software.
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8

Isolation and Analysis of Hippocampal Immune Cells

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Animals were transcardially perfused with precooled PBS. Then, the whole brain was removed and placed in precooled complete DMEM to further isolate the hippocampus under a stereomicroscope. The hippocampi were scissor-minced and manually homogenized. The tissue was subsequently dissociated by adding accutase (Sigma-Aldrich) and incubated at 37 °C, 5% CO2 in a cell culture incubator for 15 min. The reaction was stopped by adding serum-containing culture medium. Single-cell suspensions were filtered with a 70-µm nylon mesh. Density gradient centrifugation using Percoll (Biosharp) was performed to isolate the mononucleated immune cells. Samples were washed with PBS three times. Fc receptors were blocked by TruStain FcX™ PLUS (anti-mouse CD16/32, Biolegend) for 5 min on ice. PE anti-mouse CD3ε antibody (Biolegend), FITC anti-mouse CD4 antibody (Biolegend) and APC anti-mouse CD8a antibody (Biolegend) were added for 20 min at 4 °C and protected from light. Isotype-matched antibodies were used as controls. After cleaning the cells with PBS three times, samples were run on a BD LSRFortessa cell analyzer.
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