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Phospho fgfr

Manufactured by Cell Signaling Technology
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The Phospho-FGFR product is a laboratory reagent used to detect and quantify the phosphorylation of fibroblast growth factor receptors (FGFRs) in biological samples. It provides a direct and specific method for measuring FGFR activation, which is a key signaling event in various cellular processes.

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8 protocols using phospho fgfr

1

Western Blot Analysis of FGF Signaling

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The cells were homogenized in lysis buffer (50mM Tris/HCl pH 7.4, 500mM NaCl, 1% NP-40, 0.5% Na-DOC, 0.1% SDS) supplemented with 20μg/ml complete protease inhibitor cocktail (Roche, Mannheim, Germany), 5mM NaF and 100μM Na-vanadate. Aliquots containing 20μg of protein were analyzed by electrophoresis on 10% polyacrylamide gels and transferred to polyvinylidene-difluoride membranes. Proteins were identified using antibodies to phospho-FRS2α (Cell signalling, Boston, MA; #3861), phospho-FGFR (Cell Signalling; #3471) and FGFR3 (#sc-123, recognizes both FGFR3 splice variants; Santa Cruz Biotechnology, Inc., Dallas, TX); ERK1/2 (Upstate, Lake Placid, NY #06-182; 1:5000), phospho-ERK (Cell signalling, sampler kit: phospho-p44/42 MAP Kinase Thr202/Tyr204; 1:5000), GSK3β (Cell signalling #9315; 1:1000), phospho-GSK3β (Cell signalling #9323; 1:1000), S6 (#2212, Cell signalling, Boston, MA; 1:5000), phospho-S6 (Cell signalling #2215; 1:5000). Band intensity was quantified using ImageQuant software (GE Healthcare).
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2

Protein Expression Analysis of Tumor Samples

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Total protein lysates from tumors were extracted by RIPA lysis buffer supplemented with proteinase and phosphatase inhibitors (Roche Diagnostics, 4693159001). The samples were separated on a 10% SDS‒PAGE gel, transferred to a nitrocellulose membrane (Millipore), and probed with the following antibodies: Fgfr2 (1:1000, Merck, sc-6930), phospho-Fgfr (1:1000, Cell Signaling Technology, 3476), Vegfr2 (1:1000, Cell Signaling Technology, 12599), phospho-Src (Tyr416) (1:1000, Cell Signaling Technology, 2101), β-actin (1:1000, Cell Signaling Technology, 3700), phospho-AKT (Ser473) (1:1000, Cell Signaling Technology, 9271), phospho-AKT (Thr308) (1:1000, Cell Signaling Technology, 13038), and EGFR (1:1000, Cell Signaling Technology, 8339). Full and uncropped western blots are presented in the Supplemental File.
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3

Immunoblotting of FGF Receptor Signaling

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Total protein lysates were extracted from untreated cell lines as well as 48 h after siRNA transfection or 2 or 5 h after inhibitor treatment. For western blot analysis equal amounts of total protein were loaded on NuPAGE® Bis-Tris Gels (Life Technologies). Electrophoretically separated proteins were transferred to nitrocellulose membrane and unspecific binding was blocked with 5% milk/PBS-Tween. Membranes were incubated with primary antibodies overnight at 4°C (FGFR2 1:500; ACTB 1:5000, AC-15, both Sigma Aldrich; FGFR1 1:500; FGFR4 1:500, AM11076PU-N, both from Acris Antibodies, San Diego CA, U.S.A.; FGFR3 1:500, D2G7E; phospho-FGFR 1:500, 55H2; ERK1/2 1:1000; phospho-ERK1/2 1:1000, 20G11, all from CellSignaling Technology, Danvers MA, U.S.A.; HPRT 1:1000, abcam). After incubation with HRP-conjugated secondary antibody SuperSignal West Pico or Femto Chemiluminescent Substrate (Thermo Scientific) was used for detection.
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4

Immunoblotting Analysis of Signaling Pathways

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Cell and tumor lysates were prepared in lysis buffer as described before [17 (link)]. Total protein amount was measured using the Bradford method (Bio-Rad, Hercules, CA, USA). 10–30 μg of proteins was subjected to electrophoresis on NuPage gels (Invitrogen). Immunoblotting was performed with antibodies recognizing phospho-FGFR (1:1000), AKT (1:1000), phospho-AKT (1:500), phospho-ERK (1:500), PARP (1:1000), cleaved PARP (1:1000), or β-actin (1:1000) from Cell Signaling Technology (Beverly, MA) and FGFR2 (1:400) (R&D, Minneapolis, MN, USA) or ERK2 (1:1000) (Santa Cruz Biotechnology, Dallas, TX, USA), followed by incubation with the appropriate horseradish peroxidase-conjugated secondary antibodies (1:3000) (Cell Signaling; GE Healthcare, Little Chalfont, UK).
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5

Comprehensive Signaling Pathway Assay

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Assays were performed as a previous study [44 (link)]. Antibodies were from Cell Signaling (Danvers, MA), including Phospho-FGFR (Tyr653/654) (#3471), Phospho-MEK1/2 (#9121), Phospho-p44/42 MAPK (#9106), p44/42 MAPK (#4695), Cyclin D1 (#2978), p21 (#2946), p27 (#2552), Phospho-Rb (Ser807/811) (#9308), cleaved PARP (Asp214) (#9541), PARP (#9542), LATS1 (#9153), LATS2 (#5888) Phospho c-Jun (Ser73) (#3270), c-Jun (#9165), c-Myc (#9402); Abcam (MA, US), including anti-FGFR2 (ab58201), and anti-YAP1 (ab52771); Immunoway (TX, US), including Bcl2 (YM3041) and β-Actin (YM3115); Santa Cruz (TX, US) including CTGF (sc-14939) and TEAD4 (TEF-3, sc-101184). The other antibodies include Phospho-LATS1/2 (Ser909/872) (AP0904, Abclonal), N-cadherin (#33-3900, ZYMED).
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6

Quantifying Phosphorylation Signaling Cascades

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To reduce basal phosphorylation, cells were cultured for 24 h in growth factor/serum-free medium. Starved cells were pretreated with vehicle or sorafenib for different times (15–180 min), and then either EGF (20 ng/ml) or bFGF (10 ng/ml) was added for 10 min. Total protein content was measured from whole cell lysates as described previously [32 (link)]. Equal amounts of proteins were size-fractionated by SDS-PAGE, and transferred onto PVDF membrane (Bio-Rad Laboratories). Blots were probed with the following antibodies: phospho-ERK1/2 (Thr201-Tyr204, #9101), phospho-MEK (Ser217/221, #9121), phospho-Akt (Ser473, #9271) phospho-STAT3 (Ser-727, #9134), Mcl-1 (#5453), phospho-FGFR (Tyr653/654, #3476), and FGFR1 (#9740) from Cell Signaling and α-tubulin (#T5168; Sigma-Aldrich). Secondary mouse and rabbit HRP-linked antibodies were from GE Healthcare. Detection of immunocomplexes was performed using Clarity ECL Western Blot (Bio-Rad Laboratories). All experiments were repeated at least three times. Densitometric analysis of bands was performed using ChemiDoc imaging system (Bio-Rad Laboratories).
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7

FGFR Signaling Pathway Activation

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Example 12

Cells were seeded on tissue culture plates for 24 hours, pre-treated with 10 μg/ml FGFR blocking or control anti-gD antibody, then stimulated with 25 ng/ml FGF-7 (R&D Systems) in the presence of 20 μg/ml heparin (Sigma) for 15 minutes. Cells were placed on ice and protein immediately harvested with IP lysis buffer (Thermo Scientific). Protein lysates were passed through a syringe, cleared by centrifugation, then quantified using BCA protein assay (Thermo Scientific). Protein was separated on 4-12% Bis-Tris gels (Life Technologies), transferred to nitrocellulose membranes, blocked with 5% BSA or milk in TBST for 30 minutes, then blotted with primary antibody overnight at 4 C. Antibodies used: phospho-FGFR (Y653/654), phospho-FRS2 (Y196), phospho-ERK1/2 (T202/Y204), ERK1/2, phospho-AKT (S473), AKT, phospho-HER3 (Y1289), HER3, phospho-PLCgammal (Y783), PLCgammal (Cell Signaling); FGFR2, FRS2 (Santa Cruz Biotechnology); beta-actin (Sigma). Membranes were washed and incubated with appropriate HRP conjugated secondary antibodies for 1 hour, then washed and detected with SuperSignal West Femto Chemiluminescent Substrate (Thermo Scientific). Luminescence signal was acquired with FluorChem Q (Alpha Innotech).

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8

FGF2 and FGFR1 Signaling Pathway Assay

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Recombinant FGF2 was purchased from Gibco (#PHG0024). Heparin sulfate was purchased from StemCell Technologies (#07980). The following antibodies were used (all primary antibodies are rabbit derived unless otherwise noted): anti-FGFR1 (#9740), phospho-FGFR (Y653/654, #3476, mouse derived), phospho-FRS2 (Y436, #3861; Y196, #3864), PLCγ (#5690), phospho-PLCγ (Y783, #2821), ERK (#4695), phospho-ERK (T202/Y204 #4370), Akt (#4691), phospho-Akt (S473 #4060), STAT3 (#4904), phospho-STAT3 (Y705, #9145), E-cadherin (#3195), Vimentin (#5741), ZEB1 (#3396), N-cadherin (#13116), HIF1α (#14179), Bcl-XL (#2764), Hsp90 (#4877), FGF2 (#61977), TGFβ (#3711), Cyclin D1 (#2978), GAPDH (#2118), horseradish peroxidase (HRP)-linked rabbit IgG secondary antibody (#7074) and HRP-linked mouse IgG secondary antibody (#7076), from Cell Signaling Technology. Anti-FRS2 (#10425, mouse derived) was purchased from Abcam. AZD4547 was purchased from Selleck Chemistry. The following CyTOF antibodies were purchased from Fluidigm Inc.: STAT3 (#3173003A), pSTAT3 (#3158005A), Vimentin (#3154014A), TGFβ (#3163010B), SOX2 (#3150019B), and Nanog (#3169014A). Custom antibody-metal conjugations were performed using kits purchased from Fluidigm, Inc. (PRD002) and carrier-free antibodies targeting FGFR1 (#9740), pFGFR1 (#3476), pFRS2 Y196 (#3864), and ZEB1 (#3396) were purchased from Cell Signaling Technology.
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